RNA–Protein interactions for RNA: YHR016C

YSC84, Transcript of Actin-binding protein, yeastyeast

Gene YSC84, Length 1,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSC84YHR016C YSC83P32792 385 aa12.48□□□□□ -0.41
YSC84YHR016C PHO88P38264 188 aaPredicted RBP12.48□□□□□ -0.41
YSC84YHR016C TIF5P38431 405 aaKnown RBP12.48□□□□□ -0.41
YSC84YHR016C FIS1P40515 155 aa12.48□□□□□ -0.41
YSC84YHR016C VPS70P47161 811 aa12.48□□□□□ -0.41
YSC84YHR016C LIF1P53150 421 aa12.48□□□□□ -0.41
YSC84YHR016C CPR6P53691 371 aaKnown RBP12.48□□□□□ -0.41
YSC84YHR016C RPL22BP56628 122 aaKnown RBP12.48□□□□□ -0.41
YSC84YHR016C YML119WQ03208 357 aa12.48□□□□□ -0.41
YSC84YHR016C DON1Q05610 365 aa12.48□□□□□ -0.41
YSC84YHR016C PHM6Q05637 104 aa12.48□□□□□ -0.41
YSC84YHR016C YDL206WQ12424 762 aa12.48□□□□□ -0.41
YSC84YHR016C SPT2P06843 333 aaPredicted RBP12.47□□□□□ -0.41
YSC84YHR016C PEP5P12868 1029 aa12.47□□□□□ -0.41
YSC84YHR016C CAP1P28495 268 aaKnown RBP12.47□□□□□ -0.41
YSC84YHR016C TFC4P33339 1025 aa12.47□□□□□ -0.41
YSC84YHR016C OCT1P35999 772 aa12.47□□□□□ -0.41
YSC84YHR016C PCS60P38137 543 aaKnown RBP RIP-Chip data12.47□□□□□ -0.41 RIP-Chip
YSC84YHR016C RIX1P38883 763 aaPredicted RBP12.47□□□□□ -0.41
YSC84YHR016C ATG36P46983 293 aa12.47□□□□□ -0.41
YSC84YHR016C NCS2P53923 493 aaPredicted RBP12.47□□□□□ -0.41
YSC84YHR016C YLR326WQ06170 240 aaKnown RBP12.47□□□□□ -0.41
YSC84YHR016C RKM4Q12504 494 aa12.47□□□□□ -0.41
YSC84YHR016C PGK1P00560 416 aaKnown RBP12.46□□□□□ -0.41
YSC84YHR016C RNA1P11745 407 aaKnown RBP12.46□□□□□ -0.41
YSC84YHR016C TCP1P12612 559 aaKnown RBP12.46□□□□□ -0.41
YSC84YHR016C KAR3P17119 729 aa12.46□□□□□ -0.41
YSC84YHR016C VPS35P34110 944 aa12.46□□□□□ -0.41
YSC84YHR016C END3P39013 349 aa12.46□□□□□ -0.41
YSC84YHR016C INA22P40576 216 aa12.46□□□□□ -0.41
YSC84YHR016C CDC33P07260 213 aaKnown RBP12.45□□□□□ -0.42
YSC84YHR016C POL3P15436 1097 aa12.45□□□□□ -0.42
YSC84YHR016C GAL11P19659 1081 aa12.45□□□□□ -0.42
YSC84YHR016C CDC11P32458 415 aa12.45□□□□□ -0.42
YSC84YHR016C HEL1P36113 551 aa12.45□□□□□ -0.42
YSC84YHR016C NCL1P38205 684 aaKnown RBP12.45□□□□□ -0.42
YSC84YHR016C FAR8Q05040 523 aa12.45□□□□□ -0.42
YSC84YHR016C ACM1Q08981 209 aa12.45□□□□□ -0.42
YSC84YHR016C FBP1P09201 348 aa12.45□□□□□ -0.42
YSC84YHR016C SRV2P17555 526 aaKnown RBP12.45□□□□□ -0.42
YSC84YHR016C SWH1P35845 1188 aa12.45□□□□□ -0.42
YSC84YHR016C YKR018CP36114 725 aa12.45□□□□□ -0.42
YSC84YHR016C PBP2P38151 413 aaKnown RBP RIP-Chip data12.45□□□□□ -0.42not detected
YSC84YHR016C YBR062CP38239 180 aa12.45□□□□□ -0.42
YSC84YHR016C YML037CQ03703 340 aa12.45□□□□□ -0.42
YSC84YHR016C CMS1Q07897 291 aaKnown RBP12.45□□□□□ -0.42
YSC84YHR016C NOB1Q08444 459 aaKnown RBP12.45□□□□□ -0.42
YSC84YHR016C MPC54Q08550 464 aa12.45□□□□□ -0.42
YSC84YHR016C SLX4Q12098 748 aa12.45□□□□□ -0.42
YSC84YHR016C HVG1P0CE11 249 aa12.44□□□□□ -0.42
YSC84YHR016C RAD18P10862 487 aa12.44□□□□□ -0.42
YSC84YHR016C NIP1P32497 812 aaKnown RBP12.44□□□□□ -0.42
YSC84YHR016C BSD2P38356 321 aa12.44□□□□□ -0.42
YSC84YHR016C ATG1P53104 897 aa12.44□□□□□ -0.42
YSC84YHR016C ATG16Q03818 150 aa12.44□□□□□ -0.42
YSC84YHR016C TMA64Q04600 565 aaKnown RBP12.44□□□□□ -0.42
YSC84YHR016C DBP5P20449 482 aaKnown RBP12.43□□□□□ -0.42
YSC84YHR016C YDJ1P25491 409 aaKnown RBP12.43□□□□□ -0.42
YSC84YHR016C GPI10P30777 616 aa12.43□□□□□ -0.42
YSC84YHR016C DBF4P32325 704 aa12.43□□□□□ -0.42
YSC84YHR016C HEK2P38199 381 aaKnown RBP RIP-Chip data12.43□□□□□ -0.42not detected
YSC84YHR016C MSG5P38590 489 aa12.43□□□□□ -0.42
YSC84YHR016C YTA12P40341 825 aa12.43□□□□□ -0.42
YSC84YHR016C TDA10P42938 290 aa12.43□□□□□ -0.42
YSC84YHR016C YJL007CP47080 104 aa12.43□□□□□ -0.42
YSC84YHR016C CLA4P48562 842 aa12.43□□□□□ -0.42
YSC84YHR016C YGR111WP53265 400 aa12.43□□□□□ -0.42
YSC84YHR016C SUB1P54000 292 aaKnown RBP12.43□□□□□ -0.42
YSC84YHR016C SHR3Q02774 210 aa12.43□□□□□ -0.42
YSC84YHR016C PUF4P25339 888 aaKnown RBP RIP-Chip data12.42□□□□□ -0.42not detected
YSC84YHR016C PER1P25625 357 aa12.42□□□□□ -0.42
YSC84YHR016C MUD1P32605 298 aaKnown RBP12.42□□□□□ -0.42
YSC84YHR016C RRN6P32786 894 aa12.42□□□□□ -0.42
YSC84YHR016C RIM101P33400 625 aa12.42□□□□□ -0.42
YSC84YHR016C YBL055CP34220 418 aaPredicted RBP12.42□□□□□ -0.42
YSC84YHR016C RPC37P36121 282 aa12.42□□□□□ -0.42
YSC84YHR016C VHC1P38329 1120 aa12.42□□□□□ -0.42
YSC84YHR016C ERC1P38767 581 aa12.42□□□□□ -0.42
YSC84YHR016C VAB2P40003 282 aa12.42□□□□□ -0.42
YSC84YHR016C TAM41P53230 385 aa12.42□□□□□ -0.42
YSC84YHR016C VPS16Q03308 798 aa12.42□□□□□ -0.42
YSC84YHR016C YDR222WQ04925 415 aa12.42□□□□□ -0.42
YSC84YHR016C YLR177WQ06251 628 aa12.42□□□□□ -0.42
YSC84YHR016C PUF3Q07807 879 aaKnown RBP RIP-Chip data12.42□□□□□ -0.42not detected
YSC84YHR016C SPO16P17122 198 aa12.41□□□□□ -0.42
YSC84YHR016C TGL1P34163 548 aa12.41□□□□□ -0.42
YSC84YHR016C YGL039WP53183 348 aaKnown RBP12.41□□□□□ -0.42
YSC84YHR016C MAG2Q06436 670 aaKnown RBP12.41□□□□□ -0.42
YSC84YHR016C CRD1Q07560 283 aa12.41□□□□□ -0.42
YSC84YHR016C GUD1Q07729 489 aa12.41□□□□□ -0.42
YSC84YHR016C CDC53Q12018 815 aaKnown RBP12.41□□□□□ -0.42
YSC84YHR016C PTC3P34221 468 aaKnown RBP12.4□□□□□ -0.42
YSC84YHR016C ASG1P40467 964 aa12.4□□□□□ -0.42
YSC84YHR016C NET1P47035 1189 aa12.4□□□□□ -0.42
YSC84YHR016C TMA22P47089 198 aaPredicted RBP12.4□□□□□ -0.42
YSC84YHR016C CTR1P49573 406 aa12.4□□□□□ -0.42
YSC84YHR016C SPC24Q04477 213 aa12.4□□□□□ -0.42
YSC84YHR016C PRP4P20053 465 aaKnown RBP12.39□□□□□ -0.43
YSC84YHR016C DAL2P25335 343 aa12.39□□□□□ -0.43
YSC84YHR016C RAD5P32849 1169 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 5,963 RNA–protein pairs in 123.6 ms