RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A DAM1P53267 343 aa4.83□□□□□ -1.64
EFG1YGR271C-A YDL124WQ07551 312 aaKnown RBP4.83□□□□□ -1.64
EFG1YGR271C-A YOR022CQ12204 715 aa4.83□□□□□ -1.64
EFG1YGR271C-A YLR415CO13578 112 aa4.82□□□□□ -1.64
EFG1YGR271C-A DAL7P21826 554 aa4.82□□□□□ -1.64
EFG1YGR271C-A HXT16P47185 567 aa4.82□□□□□ -1.64
EFG1YGR271C-A AMA1P50082 593 aa4.82□□□□□ -1.64
EFG1YGR271C-A TAD1P53065 400 aa4.82□□□□□ -1.64
EFG1YGR271C-A GND2P53319 492 aa4.82□□□□□ -1.64
EFG1YGR271C-A ATP25Q03153 612 aa4.82□□□□□ -1.64
EFG1YGR271C-A PKH1Q03407 766 aa4.82□□□□□ -1.64
EFG1YGR271C-A LRS4Q04087 347 aaKnown RBP4.82□□□□□ -1.64
EFG1YGR271C-A REH1Q06709 432 aa4.82□□□□□ -1.64
EFG1YGR271C-A FLC1Q08967 793 aa4.82□□□□□ -1.64
EFG1YGR271C-A YCL002CP25565 263 aa4.81□□□□□ -1.64
EFG1YGR271C-A HUL4P40985 892 aa4.81□□□□□ -1.64
EFG1YGR271C-A PFA3P42836 336 aa4.81□□□□□ -1.64
EFG1YGR271C-A RTA1P53047 317 aa4.81□□□□□ -1.64
EFG1YGR271C-A YGR125WP53273 1036 aa4.81□□□□□ -1.64
EFG1YGR271C-A YMR206WQ03695 313 aa4.81□□□□□ -1.64
EFG1YGR271C-A HBT1Q07653 1046 aaKnown RBP4.81□□□□□ -1.64
EFG1YGR271C-A MSL5Q12186 476 aaKnown RBP RIP-Chip data4.81□□□□□ -1.64not detected
EFG1YGR271C-A YBR182C-AQ8TGU6 64 aa4.81□□□□□ -1.64
EFG1YGR271C-A NGG1P32494 702 aa4.8□□□□□ -1.64
EFG1YGR271C-A PZF1P39933 429 aa4.8□□□□□ -1.64
EFG1YGR271C-A ALG2P43636 503 aa4.8□□□□□ -1.64
EFG1YGR271C-A YJL163CP46996 555 aa4.8□□□□□ -1.64
EFG1YGR271C-A SSY5P47002 699 aa4.8□□□□□ -1.64
EFG1YGR271C-A TY4A-JP47023 414 aa4.8□□□□□ -1.64
EFG1YGR271C-A PRC1P00729 532 aa4.79□□□□□ -1.64
EFG1YGR271C-A LAT1P12695 482 aaKnown RBP4.79□□□□□ -1.64
EFG1YGR271C-A SPC42P36094 363 aa4.79□□□□□ -1.64
EFG1YGR271C-A SET5P38890 526 aaKnown RBP4.79□□□□□ -1.64
EFG1YGR271C-A ATF1P40353 525 aa4.79□□□□□ -1.64
EFG1YGR271C-A NRG1Q03125 231 aa4.79□□□□□ -1.64
EFG1YGR271C-A BDF2Q07442 638 aa4.79□□□□□ -1.64
EFG1YGR271C-A ATG11Q12527 1178 aa4.79□□□□□ -1.64
EFG1YGR271C-A CAN1P04817 590 aa4.78□□□□□ -1.64
EFG1YGR271C-A TOM70P07213 617 aaKnown RBP4.78□□□□□ -1.64
EFG1YGR271C-A SPC29P33419 253 aa4.78□□□□□ -1.64
EFG1YGR271C-A SAK1P38990 1142 aa4.78□□□□□ -1.64
EFG1YGR271C-A YIR042CP40586 236 aa4.78□□□□□ -1.64
EFG1YGR271C-A HUL5P53119 910 aa4.78□□□□□ -1.64
EFG1YGR271C-A NOP7P53261 605 aaKnown RBP4.78□□□□□ -1.64
EFG1YGR271C-A YML122CQ03207 126 aa4.78□□□□□ -1.64
EFG1YGR271C-A RSC3Q06639 885 aa4.78□□□□□ -1.64
EFG1YGR271C-A MET7Q08645 548 aa4.78□□□□□ -1.64
EFG1YGR271C-A ECM1P39715 212 aa4.77□□□□□ -1.65
EFG1YGR271C-A RSP5P39940 809 aaKnown RBP4.77□□□□□ -1.65
EFG1YGR271C-A HOS4P40480 1083 aa4.77□□□□□ -1.65
EFG1YGR271C-A BAP3P41815 604 aa4.77□□□□□ -1.65
EFG1YGR271C-A RIA1P53893 1110 aa4.77□□□□□ -1.65
EFG1YGR271C-A TGL5Q12043 749 aa4.77□□□□□ -1.65
EFG1YGR271C-A GAL11P19659 1081 aa4.76□□□□□ -1.65
EFG1YGR271C-A ZIP2P53061 704 aa4.76□□□□□ -1.65
EFG1YGR271C-A IRC13Q08630 104 aa4.76□□□□□ -1.65
EFG1YGR271C-A MRH1Q12117 320 aaPredicted RBP4.76□□□□□ -1.65
EFG1YGR271C-A RLP7P40693 322 aaKnown RBP4.75□□□□□ -1.65
EFG1YGR271C-A YDR514CQ04408 483 aa4.75□□□□□ -1.65
EFG1YGR271C-A ASM4Q05166 528 aa4.75□□□□□ -1.65
EFG1YGR271C-A NSE3Q05541 303 aa4.75□□□□□ -1.65
EFG1YGR271C-A SGO1Q08490 590 aa4.75□□□□□ -1.65
EFG1YGR271C-A YBR259WP38338 688 aa4.74□□□□□ -1.65
EFG1YGR271C-A BCD1P38772 366 aa4.74□□□□□ -1.65
EFG1YGR271C-A FMP52P40008 231 aa4.74□□□□□ -1.65
EFG1YGR271C-A YDR338CQ05497 695 aa4.74□□□□□ -1.65
EFG1YGR271C-A SUT2Q12286 268 aa4.74□□□□□ -1.65
EFG1YGR271C-A SIR3P06701 978 aa4.73□□□□□ -1.65
EFG1YGR271C-A CUE2P36075 443 aaKnown RBP4.73□□□□□ -1.65
EFG1YGR271C-A HSV2P50079 448 aaPredicted RBP4.73□□□□□ -1.65
EFG1YGR271C-A ZDS1P50111 915 aaKnown RBP4.73□□□□□ -1.65
EFG1YGR271C-A TEL2P53038 688 aa4.73□□□□□ -1.65
EFG1YGR271C-A MAL11P53048 616 aa4.73□□□□□ -1.65
EFG1YGR271C-A DIF1O13577 133 aa4.72□□□□□ -1.65
EFG1YGR271C-A SAP190P36123 1033 aa4.72□□□□□ -1.65
EFG1YGR271C-A UBC11P52492 156 aa4.72□□□□□ -1.65
EFG1YGR271C-A TEX1P53851 422 aaKnown RBP4.72□□□□□ -1.65
EFG1YGR271C-A CRR1Q05790 422 aa4.72□□□□□ -1.65
EFG1YGR271C-A STI1P15705 589 aaKnown RBP RIP-Chip data4.71□□□□□ -1.66not detected
EFG1YGR271C-A HIR1P32479 840 aa4.71□□□□□ -1.66
EFG1YGR271C-A MTC2P34246 357 aa4.71□□□□□ -1.66
EFG1YGR271C-A PCL5P38794 229 aa4.71□□□□□ -1.66
EFG1YGR271C-A SMX3P54999 86 aaPredicted RBP4.71□□□□□ -1.66
EFG1YGR271C-A NDJ1Q12366 352 aa4.71□□□□□ -1.66
EFG1YGR271C-A PHR1P05066 565 aaKnown RBP RIP-Chip data4.7□□□□□ -1.66not detected
EFG1YGR271C-A GDH3P39708 457 aa4.7□□□□□ -1.66
EFG1YGR271C-A TAH11P47112 604 aa4.7□□□□□ -1.66
EFG1YGR271C-A MTR3P48240 250 aaPredicted RBP4.7□□□□□ -1.66
EFG1YGR271C-A VPS73P53142 486 aaKnown RBP4.7□□□□□ -1.66
EFG1YGR271C-A GFA1P14742 717 aaKnown RBP4.69□□□□□ -1.66
EFG1YGR271C-A CCT3P39077 534 aaKnown RBP4.69□□□□□ -1.66
EFG1YGR271C-A SHR5P41912 237 aa4.69□□□□□ -1.66
EFG1YGR271C-A NNF1P47149 201 aa4.69□□□□□ -1.66
EFG1YGR271C-A TAF3Q12297 353 aa4.69□□□□□ -1.66
EFG1YGR271C-A PER1P25625 357 aa4.68□□□□□ -1.66
EFG1YGR271C-A APL2P36000 726 aaPredicted RBP4.68□□□□□ -1.66
EFG1YGR271C-A MCD4P36051 919 aa4.68□□□□□ -1.66
EFG1YGR271C-A TDP1P38319 544 aa4.68□□□□□ -1.66
EFG1YGR271C-A ALY2P47029 1046 aa4.68□□□□□ -1.66
EFG1YGR271C-A YAP1802P53309 568 aa4.68□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms