RNA–Protein interactions for RNA: YGR240C

PFK1, Transcript of Alpha subunit of heterooctameric phosphofructokinase, yeast

Gene PFK1, Length 2,964 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PFK1	YGR240C	LEU1	P07264	779 aa	Known RBP	4.73	□□□□□ -1.65
PFK1	YGR240C	KCC4	P25389	1037 aa		4.73	□□□□□ -1.65
PFK1	YGR240C	ITR1	P30605	584 aa		4.73	□□□□□ -1.65
PFK1	YGR240C	HSP104	P31539	908 aa	Known RBP	4.73	□□□□□ -1.65
PFK1	YGR240C	DBF4	P32325	704 aa		4.73	□□□□□ -1.65
PFK1	YGR240C	RFC1	P38630	861 aa	Known RBP	4.73	□□□□□ -1.65
PFK1	YGR240C	YLF2	P38746	405 aa		4.73	□□□□□ -1.65
PFK1	YGR240C	STN1	P38960	494 aa		4.73	□□□□□ -1.65
PFK1	YGR240C	SKP2	P42843	763 aa		4.73	□□□□□ -1.65
PFK1	YGR240C	AIP1	P46680	615 aa	Known RBP	4.73	□□□□□ -1.65
PFK1	YGR240C	MAD3	P47074	515 aa		4.73	□□□□□ -1.65
PFK1	YGR240C	EAR1	Q03212	550 aa		4.73	□□□□□ -1.65
PFK1	YGR240C	DPB4	Q04603	196 aa	Known RBP	4.73	□□□□□ -1.65
PFK1	YGR240C	EIS1	Q05050	843 aa	Known RBP	4.73	□□□□□ -1.65
PFK1	YGR240C	TAF3	Q12297	353 aa		4.73	□□□□□ -1.65
PFK1	YGR240C	CCP1	P00431	361 aa		4.73	□□□□□ -1.65
PFK1	YGR240C	KSS1	P14681	368 aa		4.73	□□□□□ -1.65
PFK1	YGR240C	PRP28	P23394	588 aa		4.73	□□□□□ -1.65
PFK1	YGR240C	ASF2	P32448	525 aa	Predicted RBP	4.73	□□□□□ -1.65
PFK1	YGR240C	WHI3	P34761	661 aa	Known RBP	4.73	□□□□□ -1.65
PFK1	YGR240C	ECM4	P36156	370 aa		4.73	□□□□□ -1.65
PFK1	YGR240C	TPA1	P40032	644 aa	Known RBP	4.73	□□□□□ -1.65
PFK1	YGR240C	UPF3	P48412	387 aa	Known RBP	4.73	□□□□□ -1.65
PFK1	YGR240C	ROM1	P53046	1155 aa		4.73	□□□□□ -1.65
PFK1	YGR240C	YML119W	Q03208	357 aa		4.73	□□□□□ -1.65
PFK1	YGR240C	ARA2	Q04212	335 aa		4.73	□□□□□ -1.65
PFK1	YGR240C	ADE8	P04161	214 aa		4.72	□□□□□ -1.65
PFK1	YGR240C	CDC34	P14682	295 aa		4.72	□□□□□ -1.65
PFK1	YGR240C	HSP60	P19882	572 aa	Known RBP	4.72	□□□□□ -1.65
PFK1	YGR240C	RPN2	P32565	945 aa	Known RBP	4.72	□□□□□ -1.65
PFK1	YGR240C	SSE1	P32589	693 aa	Known RBP	4.72	□□□□□ -1.65
PFK1	YGR240C	NPL6	P32832	435 aa		4.72	□□□□□ -1.65
PFK1	YGR240C	MRP4	P32902	394 aa		4.72	□□□□□ -1.65
PFK1	YGR240C	VPS45	P38932	577 aa		4.72	□□□□□ -1.65
PFK1	YGR240C	GEM1	P39722	662 aa		4.72	□□□□□ -1.65
PFK1	YGR240C	NEO1	P40527	1151 aa		4.72	□□□□□ -1.65
PFK1	YGR240C	CCT7	P42943	550 aa	Known RBP	4.72	□□□□□ -1.65
PFK1	YGR240C	IRC6	P43615	237 aa		4.72	□□□□□ -1.65
PFK1	YGR240C	POL31	P46957	487 aa		4.72	□□□□□ -1.65
PFK1	YGR240C	YAP1802	P53309	568 aa		4.72	□□□□□ -1.65
PFK1	YGR240C	MSH6	Q03834	1242 aa		4.72	□□□□□ -1.65
PFK1	YGR240C	ERV41	Q04651	352 aa		4.72	□□□□□ -1.65
PFK1	YGR240C	GSF2	Q04697	403 aa	Known RBP	4.72	□□□□□ -1.65
PFK1	YGR240C	ADF1	Q2V2Q1	113 aa		4.72	□□□□□ -1.65
PFK1	YGR240C	CMK1	P27466	446 aa	Known RBP	4.72	□□□□□ -1.65
PFK1	YGR240C	NIP1	P32497	812 aa	Known RBP	4.72	□□□□□ -1.65
PFK1	YGR240C	VPS17	P32913	551 aa		4.72	□□□□□ -1.65
PFK1	YGR240C	SWH1	P35845	1188 aa		4.72	□□□□□ -1.65
PFK1	YGR240C	YIL161W	P40449	235 aa	Known RBP	4.72	□□□□□ -1.65
PFK1	YGR240C	YGR266W	P53326	701 aa		4.72	□□□□□ -1.65
PFK1	YGR240C	YNL144C	P53907	740 aa		4.72	□□□□□ -1.65
PFK1	YGR240C	GTR1	Q00582	310 aa		4.72	□□□□□ -1.65
PFK1	YGR240C	MEC3	Q02574	474 aa		4.72	□□□□□ -1.65
PFK1	YGR240C	INP2	Q03824	705 aa		4.72	□□□□□ -1.65
PFK1	YGR240C	HFD1	Q04458	532 aa		4.72	□□□□□ -1.65
PFK1	YGR240C	RGA2	Q06407	1009 aa		4.72	□□□□□ -1.65
PFK1	YGR240C	NOP6	Q07623	225 aa	Known RBP	4.72	□□□□□ -1.65
PFK1	YGR240C	SLK19	Q08581	821 aa	Known RBP	4.72	□□□□□ -1.65
PFK1	YGR240C	LSO1	Q3E827	93 aa		4.72	□□□□□ -1.65
PFK1	YGR240C	PUT4	P15380	627 aa		4.71	□□□□□ -1.65
PFK1	YGR240C	NPP1	P25353	742 aa		4.71	□□□□□ -1.65
PFK1	YGR240C	SEC21	P32074	935 aa	Known RBP	4.71	□□□□□ -1.65
PFK1	YGR240C	PEX32	P38292	413 aa		4.71	□□□□□ -1.65
PFK1	YGR240C	YBR184W	P38299	523 aa		4.71	□□□□□ -1.65
PFK1	YGR240C	SIC1	P38634	284 aa		4.71	□□□□□ -1.65
PFK1	YGR240C	SPR3	P41901	512 aa		4.71	□□□□□ -1.65
PFK1	YGR240C	ERR3	P42222	437 aa		4.71	□□□□□ -1.65
PFK1	YGR240C	MDR1	P53258	950 aa		4.71	□□□□□ -1.65
PFK1	YGR240C	TIM50	Q02776	476 aa		4.71	□□□□□ -1.65
PFK1	YGR240C	YDR338C	Q05497	695 aa		4.71	□□□□□ -1.65
PFK1	YGR240C	FAL1	Q12099	399 aa	Known RBP	4.71	□□□□□ -1.65
PFK1	YGR240C	MIS1	P09440	975 aa	Known RBP	4.71	□□□□□ -1.66
PFK1	YGR240C	HO	P09932	586 aa		4.71	□□□□□ -1.66
PFK1	YGR240C	PDX1	P16451	410 aa		4.71	□□□□□ -1.66
PFK1	YGR240C	DBP1	P24784	617 aa	Known RBP	4.71	□□□□□ -1.66
PFK1	YGR240C	VPS35	P34110	944 aa		4.71	□□□□□ -1.66
PFK1	YGR240C	SET3	P36124	751 aa		4.71	□□□□□ -1.66
PFK1	YGR240C	BAP2	P38084	609 aa		4.71	□□□□□ -1.66
PFK1	YGR240C	YCK3	P39962	524 aa		4.71	□□□□□ -1.66
PFK1	YGR240C	INA22	P40576	216 aa		4.71	□□□□□ -1.66
PFK1	YGR240C	MKT1	P40850	830 aa	Known RBP	4.71	□□□□□ -1.66
PFK1	YGR240C	APP1	P53933	587 aa		4.71	□□□□□ -1.66
PFK1	YGR240C	VPS9	P54787	451 aa		4.71	□□□□□ -1.66
PFK1	YGR240C	SSQ1	Q05931	657 aa	Predicted RBP	4.71	□□□□□ -1.66
PFK1	YGR240C	TFC8	Q12308	588 aa		4.71	□□□□□ -1.66
PFK1	YGR240C	MSH1	P25846	959 aa		4.71	□□□□□ -1.66
PFK1	YGR240C	RPL8B	P29453	256 aa	Known RBP	4.71	□□□□□ -1.66
PFK1	YGR240C	MDL1	P33310	695 aa		4.71	□□□□□ -1.66
PFK1	YGR240C	NOP16	P40007	231 aa	Known RBP	4.71	□□□□□ -1.66
PFK1	YGR240C	PCL10	P53124	433 aa		4.71	□□□□□ -1.66
PFK1	YGR240C	LSC1	P53598	329 aa	Known RBP	4.71	□□□□□ -1.66
PFK1	YGR240C	SRT1	Q03175	343 aa		4.71	□□□□□ -1.66
PFK1	YGR240C	VPS20	Q04272	221 aa		4.71	□□□□□ -1.66
PFK1	YGR240C	YDR306C	Q06640	478 aa		4.71	□□□□□ -1.66
PFK1	YGR240C	MCM16	Q12262	181 aa		4.71	□□□□□ -1.66
PFK1	YGR240C	AAC3	P18238	307 aa		4.7	□□□□□ -1.66
PFK1	YGR240C	YSW1	P38280	609 aa		4.7	□□□□□ -1.66
PFK1	YGR240C	YHL008C	P38750	627 aa		4.7	□□□□□ -1.66
PFK1	YGR240C	RSC30	P38781	883 aa		4.7	□□□□□ -1.66
PFK1	YGR240C	TMN3	P40071	706 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms