RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	PCF11	P39081	626 aa	Predicted RBP	5.75	□□□□□ -1.49
VTC2	YFL004W	EMW1	P42842	904 aa	Known RBP	5.75	□□□□□ -1.49
VTC2	YFL004W	RPC17	P47076	161 aa		5.75	□□□□□ -1.49
VTC2	YFL004W	YJR008W	P47085	338 aa		5.75	□□□□□ -1.49
VTC2	YFL004W	SGM1	P47166	707 aa		5.75	□□□□□ -1.49
VTC2	YFL004W	RFX1	P48743	811 aa		5.75	□□□□□ -1.49
VTC2	YFL004W	CPR6	P53691	371 aa	Known RBP	5.75	□□□□□ -1.49
VTC2	YFL004W	RCF1	Q03713	159 aa		5.75	□□□□□ -1.49
VTC2	YFL004W	CSC1	Q06538	782 aa		5.75	□□□□□ -1.49
VTC2	YFL004W	LAM4	P38800	1345 aa		5.75	□□□□□ -1.49
VTC2	YFL004W	REP1	P03871	373 aa		5.74	□□□□□ -1.49
VTC2	YFL004W	MST1	P07236	462 aa		5.74	□□□□□ -1.49
VTC2	YFL004W	RSR1	P13856	272 aa		5.74	□□□□□ -1.49
VTC2	YFL004W	POL3	P15436	1097 aa		5.74	□□□□□ -1.49
VTC2	YFL004W	URA4	P20051	364 aa		5.74	□□□□□ -1.49
VTC2	YFL004W	GLN1	P32288	370 aa	Known RBP	5.74	□□□□□ -1.49
VTC2	YFL004W	SMY1	P32364	656 aa	Known RBP	5.74	□□□□□ -1.49
VTC2	YFL004W	YLF2	P38746	405 aa		5.74	□□□□□ -1.49
VTC2	YFL004W	ORC6	P38826	435 aa		5.74	□□□□□ -1.49
VTC2	YFL004W	SLX8	P40072	274 aa		5.74	□□□□□ -1.49
VTC2	YFL004W	HXT10	P43581	546 aa		5.74	□□□□□ -1.49
VTC2	YFL004W	PSR2	Q07949	397 aa		5.74	□□□□□ -1.49
VTC2	YFL004W	YAP7	Q08182	245 aa		5.74	□□□□□ -1.49
VTC2	YFL004W	BUG1	Q12191	341 aa		5.74	□□□□□ -1.49
VTC2	YFL004W	PTC5	Q12511	572 aa		5.74	□□□□□ -1.49
VTC2	YFL004W	CLN3	P13365	580 aa		5.74	□□□□□ -1.49
VTC2	YFL004W	YAK1	P14680	807 aa		5.74	□□□□□ -1.49
VTC2	YFL004W	GCN3	P14741	305 aa		5.74	□□□□□ -1.49
VTC2	YFL004W	VMA2	P16140	517 aa	Known RBP	5.74	□□□□□ -1.49
VTC2	YFL004W	OSM1	P21375	501 aa	Known RBP	5.74	□□□□□ -1.49
VTC2	YFL004W	UBA1	P22515	1024 aa	Known RBP	5.74	□□□□□ -1.49
VTC2	YFL004W	RFC3	P38629	340 aa		5.74	□□□□□ -1.49
VTC2	YFL004W	VMA22	P38784	181 aa		5.74	□□□□□ -1.49
VTC2	YFL004W	SMC2	P38989	1170 aa	Known RBP	5.74	□□□□□ -1.49
VTC2	YFL004W	ATG32	P40458	529 aa		5.74	□□□□□ -1.49
VTC2	YFL004W	UBP15	P50101	1230 aa		5.74	□□□□□ -1.49
VTC2	YFL004W	YGR054W	P53235	642 aa	Known RBP	5.74	□□□□□ -1.49
VTC2	YFL004W	PTA1	Q01329	785 aa	Predicted RBP	5.74	□□□□□ -1.49
VTC2	YFL004W	HMO1	Q03973	246 aa	Known RBP	5.74	□□□□□ -1.49
VTC2	YFL004W	WHI5	Q12416	295 aa		5.74	□□□□□ -1.49
VTC2	YFL004W	SWI4	P25302	1093 aa	Known RBP	5.73	□□□□□ -1.49
VTC2	YFL004W	HIR1	P32479	840 aa		5.73	□□□□□ -1.49
VTC2	YFL004W	MCD4	P36051	919 aa		5.73	□□□□□ -1.49
VTC2	YFL004W	YBL036C	P38197	257 aa		5.73	□□□□□ -1.49
VTC2	YFL004W	AKR1	P39010	764 aa		5.73	□□□□□ -1.49
VTC2	YFL004W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.73	□□□□□ -1.49	not detected
VTC2	YFL004W	SPC72	P39723	622 aa		5.73	□□□□□ -1.49
VTC2	YFL004W	NMD5	P46970	1048 aa		5.73	□□□□□ -1.49
VTC2	YFL004W	ALD6	P54115	500 aa	Known RBP	5.73	□□□□□ -1.49
VTC2	YFL004W	DIG1	Q03063	452 aa	Known RBP	5.73	□□□□□ -1.49
VTC2	YFL004W	ERB1	Q04660	807 aa	Known RBP	5.73	□□□□□ -1.49
VTC2	YFL004W	YOL075C	Q08234	1294 aa		5.73	□□□□□ -1.49
VTC2	YFL004W	TRM11	Q12463	433 aa		5.73	□□□□□ -1.49
VTC2	YFL004W	RPC34	P32910	317 aa		5.73	□□□□□ -1.49
VTC2	YFL004W	YBR032W	P38223	100 aa		5.73	□□□□□ -1.49
VTC2	YFL004W	MUM2	P38236	366 aa		5.73	□□□□□ -1.49
VTC2	YFL004W	ECL1	P48235	211 aa		5.73	□□□□□ -1.49
VTC2	YFL004W	KAP114	P53067	1004 aa		5.73	□□□□□ -1.49
VTC2	YFL004W	TMA20	P89886	181 aa	Predicted RBP	5.73	□□□□□ -1.49
VTC2	YFL004W	EST2	Q06163	884 aa		5.73	□□□□□ -1.49
VTC2	YFL004W	RPN8	Q08723	338 aa	Known RBP	5.73	□□□□□ -1.49
VTC2	YFL004W	BRR1	Q99177	341 aa	Predicted RBP	5.73	□□□□□ -1.49
VTC2	YFL004W	FKS3	Q04952	1785 aa		5.73	□□□□□ -1.49
VTC2	YFL004W	SEM1	O94742	89 aa		5.72	□□□□□ -1.49
VTC2	YFL004W	HIS4	P00815	799 aa	Known RBP	5.72	□□□□□ -1.49
VTC2	YFL004W	HIS3	P06633	220 aa		5.72	□□□□□ -1.49
VTC2	YFL004W	HEM1	P09950	548 aa	Predicted RBP	5.72	□□□□□ -1.49
VTC2	YFL004W	ERG11	P10614	530 aa		5.72	□□□□□ -1.49
VTC2	YFL004W	GDA1	P32621	518 aa		5.72	□□□□□ -1.49
VTC2	YFL004W	SMC1	P32908	1225 aa		5.72	□□□□□ -1.49
VTC2	YFL004W	NUP120	P35729	1037 aa		5.72	□□□□□ -1.49
VTC2	YFL004W	RCN1	P36054	211 aa		5.72	□□□□□ -1.49
VTC2	YFL004W	YKR078W	P36158	585 aa	Known RBP	5.72	□□□□□ -1.49
VTC2	YFL004W	YBR242W	P38331	238 aa		5.72	□□□□□ -1.49
VTC2	YFL004W	GTT3	P39996	337 aa		5.72	□□□□□ -1.49
VTC2	YFL004W	CAB2	P40506	365 aa		5.72	□□□□□ -1.49
VTC2	YFL004W	YGR266W	P53326	701 aa		5.72	□□□□□ -1.49
VTC2	YFL004W	UBP2	Q01476	1272 aa		5.72	□□□□□ -1.49
VTC2	YFL004W	SWP1	Q02795	286 aa		5.72	□□□□□ -1.49
VTC2	YFL004W	ATG13	Q06628	738 aa		5.72	□□□□□ -1.49
VTC2	YFL004W	BBP1	Q12365	385 aa		5.72	□□□□□ -1.49
VTC2	YFL004W	MDM20	Q12387	796 aa	Known RBP	5.72	□□□□□ -1.49
VTC2	YFL004W	BMH2	P34730	273 aa	Known RBP	5.72	□□□□□ -1.49
VTC2	YFL004W	YHB1	P39676	399 aa	Known RBP	5.72	□□□□□ -1.49
VTC2	YFL004W	NPT1	P39683	429 aa	Known RBP	5.72	□□□□□ -1.49
VTC2	YFL004W	FCY21	P40039	528 aa		5.72	□□□□□ -1.49
VTC2	YFL004W	EEB1	Q02891	456 aa		5.72	□□□□□ -1.49
VTC2	YFL004W	UIP4	Q08926	304 aa		5.72	□□□□□ -1.49
VTC2	YFL004W	SSF2	Q12153	453 aa	Predicted RBP	5.72	□□□□□ -1.49
VTC2	YFL004W	MPH2	P0CD99	609 aa		5.71	□□□□□ -1.49
VTC2	YFL004W	BCK2	P33306	851 aa		5.71	□□□□□ -1.49
VTC2	YFL004W	LSC1	P53598	329 aa	Known RBP	5.71	□□□□□ -1.49
VTC2	YFL004W	NAF1	P53919	492 aa	Known RBP	5.71	□□□□□ -1.49
VTC2	YFL004W	RAT1	Q02792	1006 aa	Known RBP	5.71	□□□□□ -1.49
VTC2	YFL004W	MTC5	Q03897	1148 aa		5.71	□□□□□ -1.49
VTC2	YFL004W	FIN1	Q03898	291 aa		5.71	□□□□□ -1.49
VTC2	YFL004W	MLH2	Q07980	695 aa		5.71	□□□□□ -1.49
VTC2	YFL004W	RPP1B	P10622	106 aa	Known RBP	5.71	□□□□□ -1.5
VTC2	YFL004W	SEC21	P32074	935 aa	Known RBP	5.71	□□□□□ -1.5
VTC2	YFL004W	DUR3	P33413	735 aa		5.71	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 50.9 ms