RNA–Protein interactions for RNA: YDR477W

SNF1, Transcript of AMP-activated serine/threonine protein kinase, yeast

Gene SNF1, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF1	YDR477W	MRF1	P30775	413 aa	Predicted RBP	10.68	□□□□□ -0.7
SNF1	YDR477W	NCL1	P38205	684 aa	Known RBP	10.68	□□□□□ -0.7
SNF1	YDR477W	UBP9	P39967	754 aa		10.68	□□□□□ -0.7
SNF1	YDR477W	PSY2	P40164	858 aa		10.68	□□□□□ -0.7
SNF1	YDR477W	SIP5	P40210	489 aa	Known RBP	10.68	□□□□□ -0.7
SNF1	YDR477W	ULP2	P40537	1034 aa	Predicted RBP	10.68	□□□□□ -0.7
SNF1	YDR477W	FIG4	P42837	879 aa		10.68	□□□□□ -0.7
SNF1	YDR477W	BRE2	P43132	505 aa		10.68	□□□□□ -0.7
SNF1	YDR477W	UBX4	P54730	416 aa		10.68	□□□□□ -0.7
SNF1	YDR477W	LGE1	Q02796	332 aa	Known RBP	10.68	□□□□□ -0.7
SNF1	YDR477W	ARO80	Q04052	950 aa		10.68	□□□□□ -0.7
SNF1	YDR477W	HFD1	Q04458	532 aa		10.68	□□□□□ -0.7
SNF1	YDR477W	RSA3	Q05942	220 aa	Known RBP	10.68	□□□□□ -0.7
SNF1	YDR477W	YPL277C	Q08989	487 aa		10.68	□□□□□ -0.7
SNF1	YDR477W	RPL8A	P17076	256 aa	Known RBP	10.68	□□□□□ -0.7
SNF1	YDR477W	SRO9	P25567	434 aa	Known RBP	10.68	□□□□□ -0.7
SNF1	YDR477W	RAD54	P32863	898 aa		10.68	□□□□□ -0.7
SNF1	YDR477W	YBP1	P38315	674 aa		10.68	□□□□□ -0.7
SNF1	YDR477W	TDA11	P38854	504 aa		10.68	□□□□□ -0.7
SNF1	YDR477W	STN1	P38960	494 aa		10.68	□□□□□ -0.7
SNF1	YDR477W	BEM4	P39011	633 aa		10.68	□□□□□ -0.7
SNF1	YDR477W	GTB1	Q04924	702 aa		10.68	□□□□□ -0.7
SNF1	YDR477W	RIX7	Q07844	837 aa	Known RBP	10.68	□□□□□ -0.7
SNF1	YDR477W	CDC53	Q12018	815 aa	Known RBP	10.68	□□□□□ -0.7
SNF1	YDR477W	ECM4	P36156	370 aa		10.67	□□□□□ -0.7
SNF1	YDR477W	PPX1	P38698	397 aa		10.67	□□□□□ -0.7
SNF1	YDR477W	MCM6	P53091	1017 aa	Known RBP	10.67	□□□□□ -0.7
SNF1	YDR477W	STE20	Q03497	939 aa	Known RBP	10.67	□□□□□ -0.7
SNF1	YDR477W	RTP1	Q12751	981 aa		10.67	□□□□□ -0.7
SNF1	YDR477W	RPL24A	P04449	155 aa	Known RBP	10.66	□□□□□ -0.7
SNF1	YDR477W	THS1	P04801	734 aa	Known RBP	10.66	□□□□□ -0.7
SNF1	YDR477W	GCR1	P07261	785 aa		10.66	□□□□□ -0.7
SNF1	YDR477W	SRM1	P21827	482 aa		10.66	□□□□□ -0.7
SNF1	YDR477W	SPC72	P39723	622 aa		10.66	□□□□□ -0.7
SNF1	YDR477W	RPN11	P43588	306 aa	Known RBP	10.66	□□□□□ -0.7
SNF1	YDR477W	UBP2	Q01476	1272 aa		10.66	□□□□□ -0.7
SNF1	YDR477W	BUG1	Q12191	341 aa		10.66	□□□□□ -0.7
SNF1	YDR477W	YPT6	Q99260	215 aa		10.66	□□□□□ -0.7
SNF1	YDR477W	GSC2	P40989	1895 aa		10.66	□□□□□ -0.7
SNF1	YDR477W	ENO2	P00925	437 aa	Known RBP	10.66	□□□□□ -0.7
SNF1	YDR477W	TRM2	P33753	639 aa		10.66	□□□□□ -0.7
SNF1	YDR477W	LAM1	P38851	1228 aa		10.66	□□□□□ -0.7
SNF1	YDR477W	OAF1	P39720	1047 aa	Predicted RBP	10.66	□□□□□ -0.7
SNF1	YDR477W	ALG5	P40350	334 aa		10.66	□□□□□ -0.7
SNF1	YDR477W	LCB2	P40970	561 aa		10.66	□□□□□ -0.7
SNF1	YDR477W	ALD6	P54115	500 aa	Known RBP	10.66	□□□□□ -0.7
SNF1	YDR477W	TRM11	Q12463	433 aa		10.66	□□□□□ -0.7
SNF1	YDR477W	YML002W	P0CF17	737 aa		10.65	□□□□□ -0.7
SNF1	YDR477W	PRE8	P23639	250 aa		10.65	□□□□□ -0.7
SNF1	YDR477W	RPL5	P26321	297 aa	Known RBP	10.65	□□□□□ -0.7
SNF1	YDR477W	RRN6	P32786	894 aa		10.65	□□□□□ -0.7
SNF1	YDR477W	PGM2	P37012	569 aa	Known RBP	10.65	□□□□□ -0.7
SNF1	YDR477W	PAM1	P37304	830 aa	Known RBP	10.65	□□□□□ -0.7
SNF1	YDR477W	SUL1	P38359	859 aa		10.65	□□□□□ -0.7
SNF1	YDR477W	NDT80	P38830	627 aa		10.65	□□□□□ -0.7
SNF1	YDR477W	SCS2	P40075	244 aa	Known RBP	10.65	□□□□□ -0.7
SNF1	YDR477W	SEC27	P41811	889 aa	Known RBP	10.65	□□□□□ -0.7
SNF1	YDR477W	SET4	P42948	560 aa		10.65	□□□□□ -0.7
SNF1	YDR477W	VID30	P53076	958 aa		10.65	□□□□□ -0.7
SNF1	YDR477W	HPC2	Q01448	625 aa		10.65	□□□□□ -0.7
SNF1	YDR477W	SKG3	Q06315	1026 aa		10.65	□□□□□ -0.7
SNF1	YDR477W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	10.65	□□□□□ -0.7	not detected
SNF1	YDR477W	YAH1	Q12184	172 aa	Known RBP	10.65	□□□□□ -0.7
SNF1	YDR477W	SNA3	P14359	133 aa		10.64	□□□□□ -0.71
SNF1	YDR477W	SAM2	P19358	384 aa	Known RBP	10.64	□□□□□ -0.71
SNF1	YDR477W	PYC2	P32327	1180 aa	Known RBP	10.64	□□□□□ -0.71
SNF1	YDR477W	PEX2	P32800	271 aa		10.64	□□□□□ -0.71
SNF1	YDR477W	VPS45	P38932	577 aa		10.64	□□□□□ -0.71
SNF1	YDR477W	NPR2	P39923	615 aa		10.64	□□□□□ -0.71
SNF1	YDR477W	TFG1	P41895	735 aa	Predicted RBP	10.64	□□□□□ -0.71
SNF1	YDR477W	COS5	P47187	383 aa		10.64	□□□□□ -0.71
SNF1	YDR477W	TAF6	P53040	516 aa		10.64	□□□□□ -0.71
SNF1	YDR477W	PUS6	P53294	404 aa		10.64	□□□□□ -0.71
SNF1	YDR477W	PPM1	Q04081	328 aa		10.64	□□□□□ -0.71
SNF1	YDR477W	ERV41	Q04651	352 aa		10.64	□□□□□ -0.71
SNF1	YDR477W	RGA2	Q06407	1009 aa		10.64	□□□□□ -0.71
SNF1	YDR477W	SNF1	P06782	633 aa	Known RBP	10.64	□□□□□ -0.71
SNF1	YDR477W	SWI6	P09959	803 aa		10.64	□□□□□ -0.71
SNF1	YDR477W	PAN5	P38787	379 aa		10.64	□□□□□ -0.71
SNF1	YDR477W	ALA1	P40825	983 aa	Known RBP	10.64	□□□□□ -0.71
SNF1	YDR477W	GSM1	P42950	618 aa		10.64	□□□□□ -0.71
SNF1	YDR477W	SEN54	Q02825	467 aa	Predicted RBP	10.64	□□□□□ -0.71
SNF1	YDR477W	TAL1	P15019	335 aa	Known RBP	10.63	□□□□□ -0.71
SNF1	YDR477W	TPS2	P31688	896 aa	Known RBP	10.63	□□□□□ -0.71
SNF1	YDR477W	SEC21	P32074	935 aa	Known RBP	10.63	□□□□□ -0.71
SNF1	YDR477W	DBF4	P32325	704 aa		10.63	□□□□□ -0.71
SNF1	YDR477W	TOA1	P32773	286 aa		10.63	□□□□□ -0.71
SNF1	YDR477W	MRE11	P32829	692 aa		10.63	□□□□□ -0.71
SNF1	YDR477W	COS6	P53344	381 aa		10.63	□□□□□ -0.71
SNF1	YDR477W	NOP15	P53927	220 aa	Predicted RBP	10.63	□□□□□ -0.71
SNF1	YDR477W	OSH6	Q02201	448 aa		10.63	□□□□□ -0.71
SNF1	YDR477W	CMD1	P06787	147 aa	Known RBP	10.62	□□□□□ -0.71
SNF1	YDR477W	YMR134W	P40207	237 aa		10.62	□□□□□ -0.71
SNF1	YDR477W	JEM1	P40358	645 aa		10.62	□□□□□ -0.71
SNF1	YDR477W	PFK26	P40433	827 aa	Known RBP	10.62	□□□□□ -0.71
SNF1	YDR477W	ASG1	P40467	964 aa		10.62	□□□□□ -0.71
SNF1	YDR477W	VPS70	P47161	811 aa		10.62	□□□□□ -0.71
SNF1	YDR477W	DIP5	P53388	608 aa		10.62	□□□□□ -0.71
SNF1	YDR477W	CHS2	P14180	963 aa		10.62	□□□□□ -0.71
SNF1	YDR477W	TYR1	P20049	452 aa		10.62	□□□□□ -0.71

Retrieved 100 of 5,963 RNA–protein pairs in 52.4 ms