RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C MPH2P0CD99 609 aa1.28□□□□□ -2.2
SEC1YDR164C SBA1P28707 216 aaKnown RBP1.28□□□□□ -2.2
SEC1YDR164C CCR4P31384 837 aaKnown RBP1.28□□□□□ -2.2
SEC1YDR164C YRO2P38079 344 aa1.28□□□□□ -2.2
SEC1YDR164C MET10P39692 1035 aa1.28□□□□□ -2.2
SEC1YDR164C PAC2P39937 518 aa1.28□□□□□ -2.2
SEC1YDR164C EEB1Q02891 456 aa1.28□□□□□ -2.2
SEC1YDR164C OSW1Q08692 278 aa1.28□□□□□ -2.2
SEC1YDR164C CIR2Q08822 631 aa1.28□□□□□ -2.2
SEC1YDR164C TAF3Q12297 353 aa1.28□□□□□ -2.2
SEC1YDR164C ERG11P10614 530 aa1.28□□□□□ -2.2
SEC1YDR164C BDH2P39713 417 aa1.28□□□□□ -2.2
SEC1YDR164C CCT7P42943 550 aaKnown RBP1.28□□□□□ -2.2
SEC1YDR164C ATG36P46983 293 aa1.28□□□□□ -2.2
SEC1YDR164C YJR107WP47145 328 aa1.28□□□□□ -2.2
SEC1YDR164C UBC9P50623 157 aaPredicted RBP1.28□□□□□ -2.2
SEC1YDR164C MRK1P50873 501 aa1.28□□□□□ -2.2
SEC1YDR164C YKE2P52553 114 aa1.28□□□□□ -2.2
SEC1YDR164C ASI2P53895 289 aa1.28□□□□□ -2.2
SEC1YDR164C VPS16Q03308 798 aa1.28□□□□□ -2.2
SEC1YDR164C PGK1P00560 416 aaKnown RBP1.27□□□□□ -2.21
SEC1YDR164C NUP1P20676 1076 aa1.27□□□□□ -2.21
SEC1YDR164C ASF1P32447 279 aa1.27□□□□□ -2.21
SEC1YDR164C GUS1P46655 708 aaKnown RBP RIP-Chip data1.27□□□□□ -2.21not detected
SEC1YDR164C YLR415CO13578 112 aa1.27□□□□□ -2.21
SEC1YDR164C PRP4P20053 465 aaKnown RBP1.27□□□□□ -2.21
SEC1YDR164C RPA135P22138 1203 aaKnown RBP1.27□□□□□ -2.21
SEC1YDR164C NAP1P25293 417 aaKnown RBP1.27□□□□□ -2.21
SEC1YDR164C AGP1P25376 633 aa1.27□□□□□ -2.21
SEC1YDR164C URA1P28272 314 aaPredicted RBP1.27□□□□□ -2.21
SEC1YDR164C MBP1P39678 833 aa1.27□□□□□ -2.21
SEC1YDR164C NIT3P49954 291 aa1.27□□□□□ -2.21
SEC1YDR164C CDC11P32458 415 aa1.26□□□□□ -2.21
SEC1YDR164C DUT1P33317 147 aa1.26□□□□□ -2.21
SEC1YDR164C YBR259WP38338 688 aa1.26□□□□□ -2.21
SEC1YDR164C BCD1P38772 366 aa1.26□□□□□ -2.21
SEC1YDR164C GGA2P38817 585 aaKnown RBP1.26□□□□□ -2.21
SEC1YDR164C UBC11P52492 156 aa1.26□□□□□ -2.21
SEC1YDR164C RSC3Q06639 885 aa1.26□□□□□ -2.21
SEC1YDR164C FAL1Q12099 399 aaKnown RBP1.26□□□□□ -2.21
SEC1YDR164C ABD1P32783 436 aaPredicted RBP1.25□□□□□ -2.21
SEC1YDR164C REC104P33323 182 aa1.25□□□□□ -2.21
SEC1YDR164C FYV10P40492 516 aa1.25□□□□□ -2.21
SEC1YDR164C YBP2P53169 641 aa1.25□□□□□ -2.21
SEC1YDR164C NOG2P53742 486 aaKnown RBP1.25□□□□□ -2.21
SEC1YDR164C LCD1Q04377 747 aa1.25□□□□□ -2.21
SEC1YDR164C GAD1Q04792 585 aa1.25□□□□□ -2.21
SEC1YDR164C ORM2Q06144 216 aa1.25□□□□□ -2.21
SEC1YDR164C CLF1Q12309 687 aaPredicted RBP1.25□□□□□ -2.21
SEC1YDR164C YKL033W-AQ86ZR7 236 aa1.25□□□□□ -2.21
SEC1YDR164C PYC1P11154 1178 aaKnown RBP1.25□□□□□ -2.21
SEC1YDR164C KCC4P25389 1037 aa1.25□□□□□ -2.21
SEC1YDR164C CYS3P31373 394 aaKnown RBP1.25□□□□□ -2.21
SEC1YDR164C SAP190P36123 1033 aa1.25□□□□□ -2.21
SEC1YDR164C SAK1P38990 1142 aa1.25□□□□□ -2.21
SEC1YDR164C CCT3P39077 534 aaKnown RBP1.25□□□□□ -2.21
SEC1YDR164C SIT1P39980 628 aa1.25□□□□□ -2.21
SEC1YDR164C DUS1P53759 423 aaKnown RBP1.25□□□□□ -2.21
SEC1YDR164C ATG4P53867 494 aa1.25□□□□□ -2.21
SEC1YDR164C HDA1P53973 706 aa1.25□□□□□ -2.21
SEC1YDR164C ASM4Q05166 528 aa1.25□□□□□ -2.21
SEC1YDR164C PRC1P00729 532 aa1.24□□□□□ -2.21
SEC1YDR164C PRP9P19736 530 aaKnown RBP1.24□□□□□ -2.21
SEC1YDR164C MUP3P38734 546 aa1.24□□□□□ -2.21
SEC1YDR164C SSY5P47002 699 aa1.24□□□□□ -2.21
SEC1YDR164C CWC24P53769 259 aa1.24□□□□□ -2.21
SEC1YDR164C FMP30Q02883 468 aa1.24□□□□□ -2.21
SEC1YDR164C GDE1Q02979 1223 aa1.24□□□□□ -2.21
SEC1YDR164C CTK1Q03957 528 aaKnown RBP1.24□□□□□ -2.21
SEC1YDR164C MUS81Q04149 632 aaPredicted RBP1.24□□□□□ -2.21
SEC1YDR164C SHE9Q04172 456 aa1.24□□□□□ -2.21
SEC1YDR164C ESC2Q06340 456 aa1.24□□□□□ -2.21
SEC1YDR164C GEP3Q08622 556 aa1.24□□□□□ -2.21
SEC1YDR164C TGL5Q12043 749 aa1.24□□□□□ -2.21
SEC1YDR164C NPP1P25353 742 aa1.24□□□□□ -2.21
SEC1YDR164C MRP8P35719 219 aa1.24□□□□□ -2.21
SEC1YDR164C APT2P36973 181 aa1.24□□□□□ -2.21
SEC1YDR164C PBY1P38254 753 aa1.24□□□□□ -2.21
SEC1YDR164C HRB1P38922 454 aaKnown RBP RIP-Chip data1.24□□□□□ -2.21not detected
SEC1YDR164C MTR3P48240 250 aaPredicted RBP1.24□□□□□ -2.21
SEC1YDR164C STP1Q00947 519 aa1.24□□□□□ -2.21
SEC1YDR164C NEW1Q08972 1196 aaKnown RBP1.24□□□□□ -2.21
SEC1YDR164C ADE5,7P07244 802 aaKnown RBP1.23□□□□□ -2.21
SEC1YDR164C MVD1P32377 396 aaKnown RBP1.23□□□□□ -2.21
SEC1YDR164C HIR1P32479 840 aa1.23□□□□□ -2.21
SEC1YDR164C ECM1P39715 212 aa1.23□□□□□ -2.21
SEC1YDR164C HOS4P40480 1083 aa1.23□□□□□ -2.21
SEC1YDR164C PFA3P42836 336 aa1.23□□□□□ -2.21
SEC1YDR164C IRC3Q06683 689 aa1.23□□□□□ -2.21
SEC1YDR164C SIR3P06701 978 aa1.23□□□□□ -2.21
SEC1YDR164C ABF1P14164 731 aa1.23□□□□□ -2.21
SEC1YDR164C APN1P22936 367 aa1.23□□□□□ -2.21
SEC1YDR164C HEM3P28789 327 aa1.23□□□□□ -2.21
SEC1YDR164C GMH1P36125 273 aa1.23□□□□□ -2.21
SEC1YDR164C VBA5P36172 582 aa1.23□□□□□ -2.21
SEC1YDR164C SIC1P38634 284 aa1.23□□□□□ -2.21
SEC1YDR164C ULP2P40537 1034 aaPredicted RBP1.23□□□□□ -2.21
SEC1YDR164C BAP3P41815 604 aa1.23□□□□□ -2.21
SEC1YDR164C PSA1P41940 361 aaKnown RBP1.23□□□□□ -2.21
SEC1YDR164C SEN54Q02825 467 aaPredicted RBP1.23□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 83.7 ms