RNA–Protein interactions for RNA: YCR035C

RRP43, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP43, Length 1,185 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP43YCR035C MSS51P32335 436 aa8.07□□□□□ -1.12
RRP43YCR035C SMC1P32908 1225 aa8.07□□□□□ -1.12
RRP43YCR035C XRS2P33301 854 aa8.07□□□□□ -1.12
RRP43YCR035C DUR3P33413 735 aa8.07□□□□□ -1.12
RRP43YCR035C VFA1P40080 203 aa8.07□□□□□ -1.12
RRP43YCR035C COS5P47187 383 aa8.07□□□□□ -1.12
RRP43YCR035C ORC5P50874 479 aa8.07□□□□□ -1.12
RRP43YCR035C DON1Q05610 365 aa8.07□□□□□ -1.12
RRP43YCR035C YLR297WQ05899 129 aa8.07□□□□□ -1.12
RRP43YCR035C YCG1Q06680 1035 aa8.07□□□□□ -1.12
RRP43YCR035C PLP2Q12017 286 aa8.07□□□□□ -1.12
RRP43YCR035C BMT6Q12291 365 aa8.07□□□□□ -1.12
RRP43YCR035C RRP43P25359 394 aaPredicted RBP8.06□□□□□ -1.12
RRP43YCR035C SPC110P32380 944 aa8.06□□□□□ -1.12
RRP43YCR035C NIP100P33420 868 aa8.06□□□□□ -1.12
RRP43YCR035C LDH1P38139 375 aa8.06□□□□□ -1.12
RRP43YCR035C ALD5P40047 520 aaKnown RBP8.06□□□□□ -1.12
RRP43YCR035C INP51P40559 946 aaKnown RBP8.06□□□□□ -1.12
RRP43YCR035C OSW7P43611 510 aa8.06□□□□□ -1.12
RRP43YCR035C SCD6P45978 349 aaKnown RBP RIP-Chip data8.06□□□□□ -1.12 RIP-Chip
RRP43YCR035C AZR1P50080 613 aa8.06□□□□□ -1.12
RRP43YCR035C SHE10P53075 577 aa8.06□□□□□ -1.12
RRP43YCR035C UBP3Q01477 912 aaKnown RBP RIP-Chip data8.06□□□□□ -1.12not detected
RRP43YCR035C TRS130Q03660 1102 aa8.06□□□□□ -1.12
RRP43YCR035C YDR344CQ05510 147 aa8.06□□□□□ -1.12
RRP43YCR035C ECM7Q06200 448 aa8.06□□□□□ -1.12
RRP43YCR035C HMI1Q12039 706 aa8.06□□□□□ -1.12
RRP43YCR035C SLX4Q12098 748 aa8.06□□□□□ -1.12
RRP43YCR035C YRR1Q12172 810 aa8.06□□□□□ -1.12
RRP43YCR035C ZPS1Q12512 249 aa8.06□□□□□ -1.12
RRP43YCR035C PPR1P07272 904 aaPredicted RBP8.05□□□□□ -1.12
RRP43YCR035C SPO12P17123 173 aa8.05□□□□□ -1.12
RRP43YCR035C PDC6P26263 563 aaKnown RBP8.05□□□□□ -1.12
RRP43YCR035C PCH2P38126 564 aa8.05□□□□□ -1.12
RRP43YCR035C NPP2P39997 493 aa8.05□□□□□ -1.12
RRP43YCR035C FIG4P42837 879 aa8.05□□□□□ -1.12
RRP43YCR035C ASN1P49089 572 aaKnown RBP8.05□□□□□ -1.12
RRP43YCR035C MNP1P53163 194 aaPredicted RBP8.05□□□□□ -1.12
RRP43YCR035C CUS1Q02554 436 aaPredicted RBP8.05□□□□□ -1.12
RRP43YCR035C CEF1Q03654 590 aaPredicted RBP8.05□□□□□ -1.12
RRP43YCR035C CSR1Q06705 408 aaKnown RBP8.05□□□□□ -1.12
RRP43YCR035C SHS1Q07657 551 aa8.05□□□□□ -1.12
RRP43YCR035C TUP1P16649 713 aa8.04□□□□□ -1.12
RRP43YCR035C SKG6P32900 734 aaPredicted RBP8.04□□□□□ -1.12
RRP43YCR035C PAM1P37304 830 aaKnown RBP8.04□□□□□ -1.12
RRP43YCR035C ATG3P40344 310 aa8.04□□□□□ -1.12
RRP43YCR035C IES1P43579 692 aa8.04□□□□□ -1.12
RRP43YCR035C BNI4P53858 892 aa8.04□□□□□ -1.12
RRP43YCR035C NIS1P53939 407 aa8.04□□□□□ -1.12
RRP43YCR035C TBF1Q02457 562 aa8.04□□□□□ -1.12
RRP43YCR035C VPS38Q05919 439 aa8.04□□□□□ -1.12
RRP43YCR035C YPR078CQ06813 372 aa8.04□□□□□ -1.12
RRP43YCR035C YDR524C-BQ3E6R4 66 aa8.04□□□□□ -1.12
RRP43YCR035C TOM70P07213 617 aaKnown RBP8.03□□□□□ -1.12
RRP43YCR035C IME1P21190 360 aa8.03□□□□□ -1.12
RRP43YCR035C MMS4P38257 691 aa8.03□□□□□ -1.12
RRP43YCR035C TVP23P38962 199 aa8.03□□□□□ -1.12
RRP43YCR035C SMC2P38989 1170 aaKnown RBP8.03□□□□□ -1.12
RRP43YCR035C SMC3P47037 1230 aa8.03□□□□□ -1.12
RRP43YCR035C TAD1P53065 400 aa8.03□□□□□ -1.12
RRP43YCR035C DMA2P53924 522 aa8.03□□□□□ -1.12
RRP43YCR035C MUK1Q02866 612 aa8.03□□□□□ -1.12
RRP43YCR035C RGA2Q06407 1009 aa8.03□□□□□ -1.12
RRP43YCR035C HEM1P09950 548 aaPredicted RBP8.02□□□□□ -1.13
RRP43YCR035C CBF2P32504 956 aa8.02□□□□□ -1.13
RRP43YCR035C SWI3P32591 825 aa8.02□□□□□ -1.13
RRP43YCR035C DRE2P36152 348 aa8.02□□□□□ -1.13
RRP43YCR035C JNM1P36224 373 aa8.02□□□□□ -1.13
RRP43YCR035C MRX3P38172 270 aa8.02□□□□□ -1.13
RRP43YCR035C SHQ1P40486 507 aaPredicted RBP8.02□□□□□ -1.13
RRP43YCR035C MMM1P41800 426 aa8.02□□□□□ -1.13
RRP43YCR035C CSN12P47130 423 aa8.02□□□□□ -1.13
RRP43YCR035C JSN1P47135 1091 aaKnown RBP RIP-Chip data8.02□□□□□ -1.13not detected
RRP43YCR035C SGM1P47166 707 aa8.02□□□□□ -1.13
RRP43YCR035C ERG5P54781 538 aa8.02□□□□□ -1.13
RRP43YCR035C ELP4Q02884 456 aaKnown RBP8.02□□□□□ -1.13
RRP43YCR035C DOT1Q04089 582 aaKnown RBP8.02□□□□□ -1.13
RRP43YCR035C IWR1Q07532 353 aaPredicted RBP8.02□□□□□ -1.13
RRP43YCR035C YDL206WQ12424 762 aa8.02□□□□□ -1.13
RRP43YCR035C YOL098CQ12496 1037 aa8.02□□□□□ -1.13
RRP43YCR035C COX4P04037 155 aa8.01□□□□□ -1.13
RRP43YCR035C ADE4P04046 510 aaKnown RBP8.01□□□□□ -1.13
RRP43YCR035C MTF2P10849 440 aa8.01□□□□□ -1.13
RRP43YCR035C PRR1P28708 518 aa8.01□□□□□ -1.13
RRP43YCR035C FTR1P40088 404 aa8.01□□□□□ -1.13
RRP43YCR035C SDS3P40505 327 aa8.01□□□□□ -1.13
RRP43YCR035C LAM5P43560 674 aa8.01□□□□□ -1.13
RRP43YCR035C HST2P53686 357 aa8.01□□□□□ -1.13
RRP43YCR035C CTR9P89105 1077 aa8.01□□□□□ -1.13
RRP43YCR035C UTP5Q04177 643 aaKnown RBP8.01□□□□□ -1.13
RRP43YCR035C ESC2Q06340 456 aa8.01□□□□□ -1.13
RRP43YCR035C OPY2Q06810 360 aa8.01□□□□□ -1.13
RRP43YCR035C NEW1Q08972 1196 aaKnown RBP8.01□□□□□ -1.13
RRP43YCR035C ASP3-2P0CX77 362 aa8□□□□□ -1.13
RRP43YCR035C ASP3-3P0CX78 362 aa8□□□□□ -1.13
RRP43YCR035C ASP3-4P0CX79 362 aa8□□□□□ -1.13
RRP43YCR035C ASP3-1P0CZ17 362 aa8□□□□□ -1.13
RRP43YCR035C RPL4AP10664 362 aaKnown RBP8□□□□□ -1.13
RRP43YCR035C NAT1P12945 854 aaKnown RBP8□□□□□ -1.13
RRP43YCR035C GLN3P18494 730 aa8□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms