RNA–Protein interactions for RNA: YCL050C

APA1, Transcript of AP4A phosphorylase, yeast

Gene APA1, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APA1	YCL050C	VHR1	P40522	640 aa		5.52	□□□□□ -1.53
APA1	YCL050C	AIM21	P40563	679 aa		5.52	□□□□□ -1.53
APA1	YCL050C	ALY2	P47029	1046 aa		5.52	□□□□□ -1.53
APA1	YCL050C	PKH1	Q03407	766 aa		5.52	□□□□□ -1.53
APA1	YCL050C	MET6	P05694	767 aa	Known RBP	5.51	□□□□□ -1.53
APA1	YCL050C	SAK1	P38990	1142 aa		5.51	□□□□□ -1.53
APA1	YCL050C	MAL11	P53048	616 aa		5.51	□□□□□ -1.53
APA1	YCL050C	POB3	Q04636	552 aa	Known RBP	5.51	□□□□□ -1.53
APA1	YCL050C	LAS17	Q12446	633 aa		5.51	□□□□□ -1.53
APA1	YCL050C	TRM11	Q12463	433 aa		5.51	□□□□□ -1.53
APA1	YCL050C	YBR182C-A	Q8TGU6	64 aa		5.51	□□□□□ -1.53
APA1	YCL050C	EFT1	P32324	842 aa	Known RBP	5.5	□□□□□ -1.53
APA1	YCL050C	PPG1	P32838	368 aa		5.5	□□□□□ -1.53
APA1	YCL050C	SUN4	P53616	420 aa		5.5	□□□□□ -1.53
APA1	YCL050C	SLU7	Q02775	382 aa	Known RBP	5.5	□□□□□ -1.53
APA1	YCL050C	CRR1	Q05790	422 aa		5.5	□□□□□ -1.53
APA1	YCL050C	PUS9	Q12069	462 aa		5.5	□□□□□ -1.53
APA1	YCL050C	TRP4	P07285	380 aa	Predicted RBP	5.49	□□□□□ -1.53
APA1	YCL050C	TUB3	P09734	445 aa	Known RBP	5.49	□□□□□ -1.53
APA1	YCL050C	STO1	P34160	861 aa	Known RBP	5.49	□□□□□ -1.53
APA1	YCL050C	THI21	Q08975	551 aa		5.49	□□□□□ -1.53
APA1	YCL050C	PNS1	Q12412	539 aa		5.49	□□□□□ -1.53
APA1	YCL050C	MDM12	Q92328	271 aa		5.49	□□□□□ -1.53
APA1	YCL050C	VBA3	P25594	458 aa		5.48	□□□□□ -1.53
APA1	YCL050C	MSH2	P25847	964 aa		5.48	□□□□□ -1.53
APA1	YCL050C	MTC2	P34246	357 aa		5.48	□□□□□ -1.53
APA1	YCL050C	CTF13	P35203	478 aa		5.48	□□□□□ -1.53
APA1	YCL050C	RPP1	P38786	293 aa		5.48	□□□□□ -1.53
APA1	YCL050C	RPN10	P38886	268 aa	Known RBP	5.48	□□□□□ -1.53
APA1	YCL050C	MTR3	P48240	250 aa	Predicted RBP	5.48	□□□□□ -1.53
APA1	YCL050C	ASI2	P53895	289 aa		5.48	□□□□□ -1.53
APA1	YCL050C	KIN4	Q01919	800 aa		5.48	□□□□□ -1.53
APA1	YCL050C	MUS81	Q04149	632 aa	Predicted RBP	5.48	□□□□□ -1.53
APA1	YCL050C	CDC9	P04819	755 aa		5.47	□□□□□ -1.53
APA1	YCL050C	MET3	P08536	511 aa		5.47	□□□□□ -1.53
APA1	YCL050C	PEX6	P33760	1030 aa		5.47	□□□□□ -1.53
APA1	YCL050C	KTR4	P38131	464 aa		5.47	□□□□□ -1.53
APA1	YCL050C	SUL1	P38359	859 aa		5.47	□□□□□ -1.53
APA1	YCL050C	TY4A-J	P47023	414 aa		5.47	□□□□□ -1.53
APA1	YCL050C	ZIP2	P53061	704 aa		5.47	□□□□□ -1.53
APA1	YCL050C	RNH70	P53331	553 aa		5.47	□□□□□ -1.53
APA1	YCL050C	UGO1	Q03327	502 aa		5.47	□□□□□ -1.53
APA1	YCL050C	ERG4	P25340	473 aa		5.46	□□□□□ -1.54
APA1	YCL050C	YFL052W	P43551	465 aa		5.46	□□□□□ -1.54
APA1	YCL050C	HXT16	P47185	567 aa		5.46	□□□□□ -1.54
APA1	YCL050C	MEF1	P25039	761 aa		5.45	□□□□□ -1.54
APA1	YCL050C	MCD4	P36051	919 aa		5.45	□□□□□ -1.54
APA1	YCL050C	FKH2	P41813	862 aa		5.45	□□□□□ -1.54
APA1	YCL050C	PFA3	P42836	336 aa		5.45	□□□□□ -1.54
APA1	YCL050C	BUL1	P48524	976 aa		5.45	□□□□□ -1.54
APA1	YCL050C	DLT1	Q04216	342 aa		5.45	□□□□□ -1.54
APA1	YCL050C	YLR415C	O13578	112 aa		5.44	□□□□□ -1.54
APA1	YCL050C	PRP4	P20053	465 aa	Known RBP	5.44	□□□□□ -1.54
APA1	YCL050C	RRP14	P36080	434 aa	Known RBP	5.44	□□□□□ -1.54
APA1	YCL050C	CAF16	P43569	289 aa		5.44	□□□□□ -1.54
APA1	YCL050C	SNP1	Q00916	300 aa	Predicted RBP	5.44	□□□□□ -1.54
APA1	YCL050C	RNT1	Q02555	471 aa		5.44	□□□□□ -1.54
APA1	YCL050C	NRG1	Q03125	231 aa		5.44	□□□□□ -1.54
APA1	YCL050C	YLR040C	Q07988	224 aa		5.44	□□□□□ -1.54
APA1	YCL050C	SRD1	P09007	221 aa		5.43	□□□□□ -1.54
APA1	YCL050C	CAF20	P12962	161 aa	Known RBP	5.43	□□□□□ -1.54
APA1	YCL050C	NPY1	P53164	384 aa		5.43	□□□□□ -1.54
APA1	YCL050C	YBP2	P53169	641 aa		5.43	□□□□□ -1.54
APA1	YCL050C	ALG12	P53730	551 aa		5.43	□□□□□ -1.54
APA1	YCL050C	ERG5	P54781	538 aa		5.43	□□□□□ -1.54
APA1	YCL050C	ORC1	P54784	914 aa	Predicted RBP	5.43	□□□□□ -1.54
APA1	YCL050C	YDR338C	Q05497	695 aa		5.43	□□□□□ -1.54
APA1	YCL050C	NTG2	Q08214	380 aa		5.43	□□□□□ -1.54
APA1	YCL050C	YOL073C	Q08232	322 aa		5.43	□□□□□ -1.54
APA1	YCL050C	RAD18	P10862	487 aa		5.42	□□□□□ -1.54
APA1	YCL050C	ELO3	P40319	345 aa		5.42	□□□□□ -1.54
APA1	YCL050C	DOT6	P40059	670 aa	Known RBP	5.41	□□□□□ -1.54
APA1	YCL050C	MRPS35	P53292	345 aa		5.41	□□□□□ -1.54
APA1	YCL050C	NHX1	Q04121	633 aa		5.41	□□□□□ -1.54
APA1	YCL050C	ALG7	P07286	448 aa		5.4	□□□□□ -1.54
APA1	YCL050C	HOG1	P32485	435 aa		5.4	□□□□□ -1.54
APA1	YCL050C	HSL7	P38274	827 aa		5.4	□□□□□ -1.54
APA1	YCL050C	YBR259W	P38338	688 aa		5.4	□□□□□ -1.54
APA1	YCL050C	NMD2	P38798	1089 aa	Known RBP	5.4	□□□□□ -1.54
APA1	YCL050C	BNA2	P47125	453 aa		5.4	□□□□□ -1.54
APA1	YCL050C	AMA1	P50082	593 aa		5.4	□□□□□ -1.54
APA1	YCL050C	MUP1	P50276	574 aa		5.4	□□□□□ -1.54
APA1	YCL050C	ORC4	P54791	529 aa		5.4	□□□□□ -1.54
APA1	YCL050C	CTF4	Q01454	927 aa		5.4	□□□□□ -1.54
APA1	YCL050C	ASM4	Q05166	528 aa		5.4	□□□□□ -1.54
APA1	YCL050C	FRE5	Q08908	694 aa		5.4	□□□□□ -1.54
APA1	YCL050C	TRM13	Q12383	476 aa		5.4	□□□□□ -1.54
APA1	YCL050C	PPR1	P07272	904 aa	Predicted RBP	5.39	□□□□□ -1.55
APA1	YCL050C	SIC1	P38634	284 aa		5.39	□□□□□ -1.55
APA1	YCL050C	CHS7	P38843	316 aa		5.39	□□□□□ -1.55
APA1	YCL050C	SFP1	P32432	683 aa		5.38	□□□□□ -1.55
APA1	YCL050C	PRP31	P49704	494 aa	Predicted RBP	5.38	□□□□□ -1.55
APA1	YCL050C	TFB2	Q02939	513 aa		5.38	□□□□□ -1.55
APA1	YCL050C	YMR206W	Q03695	313 aa		5.38	□□□□□ -1.55
APA1	YCL050C	RPN7	Q06103	429 aa	Known RBP	5.38	□□□□□ -1.55
APA1	YCL050C	YLR149C	Q99296	730 aa		5.38	□□□□□ -1.55
APA1	YCL050C	Q0142	Q9ZZW4	58 aa		5.38	□□□□□ -1.55
APA1	YCL050C	YEL1	P34225	687 aa		5.37	□□□□□ -1.55
APA1	YCL050C	MNN1	P39106	762 aa		5.37	□□□□□ -1.55
APA1	YCL050C	YIR042C	P40586	236 aa		5.37	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 141.4 ms