RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP13	YBL067C	YJL068C	P40363	299 aa		7.68	□□□□□ -1.18
UBP13	YBL067C	YAP5	P40574	245 aa		7.68	□□□□□ -1.18
UBP13	YBL067C	SIW14	P53965	281 aa		7.68	□□□□□ -1.18
UBP13	YBL067C	ELP4	Q02884	456 aa	Known RBP	7.68	□□□□□ -1.18
UBP13	YBL067C	SEM1	O94742	89 aa		7.67	□□□□□ -1.18
UBP13	YBL067C	CDC16	P09798	840 aa		7.67	□□□□□ -1.18
UBP13	YBL067C	YEL1	P34225	687 aa		7.67	□□□□□ -1.18
UBP13	YBL067C	PET10	P36139	283 aa		7.67	□□□□□ -1.18
UBP13	YBL067C	PEX28	P38848	579 aa		7.67	□□□□□ -1.18
UBP13	YBL067C	LAM1	P38851	1228 aa		7.67	□□□□□ -1.18
UBP13	YBL067C	KEL2	P50090	882 aa		7.67	□□□□□ -1.18
UBP13	YBL067C	PRO2	P54885	456 aa	Known RBP	7.67	□□□□□ -1.18
UBP13	YBL067C	SEC5	P89102	971 aa		7.67	□□□□□ -1.18
UBP13	YBL067C	GUD1	Q07729	489 aa		7.67	□□□□□ -1.18
UBP13	YBL067C	PAR32	Q12515	295 aa	Known RBP	7.67	□□□□□ -1.18
UBP13	YBL067C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	7.67	□□□□□ -1.18	not detected
UBP13	YBL067C	PMS1	P14242	873 aa		7.67	□□□□□ -1.18
UBP13	YBL067C	RAM1	P22007	431 aa		7.67	□□□□□ -1.18
UBP13	YBL067C	MNE1	P24720	663 aa		7.67	□□□□□ -1.18
UBP13	YBL067C	YKU70	P32807	602 aa		7.67	□□□□□ -1.18
UBP13	YBL067C	ARC19	P33204	171 aa	Known RBP	7.67	□□□□□ -1.18
UBP13	YBL067C	MCM7	P38132	845 aa		7.67	□□□□□ -1.18
UBP13	YBL067C	CCZ1	P38273	704 aa		7.67	□□□□□ -1.18
UBP13	YBL067C	YGL176C	P46945	554 aa		7.67	□□□□□ -1.18
UBP13	YBL067C	NOP9	P47077	666 aa	Known RBP	7.67	□□□□□ -1.18
UBP13	YBL067C	PIL1	P53252	339 aa	Known RBP	7.67	□□□□□ -1.18
UBP13	YBL067C	REX2	P54964	269 aa	Known RBP	7.67	□□□□□ -1.18
UBP13	YBL067C	MSH6	Q03834	1242 aa		7.67	□□□□□ -1.18
UBP13	YBL067C	YPR071W	Q12346	211 aa		7.67	□□□□□ -1.18
UBP13	YBL067C	GSY1	P23337	708 aa		7.66	□□□□□ -1.18
UBP13	YBL067C	AFR1	P33304	620 aa		7.66	□□□□□ -1.18
UBP13	YBL067C	YJR039W	P47107	1121 aa		7.66	□□□□□ -1.18
UBP13	YBL067C	YNR068C	P53754	272 aa		7.66	□□□□□ -1.18
UBP13	YBL067C	TEP1	P53916	434 aa		7.66	□□□□□ -1.18
UBP13	YBL067C	VID22	Q05934	901 aa		7.66	□□□□□ -1.18
UBP13	YBL067C	PEX15	Q08215	383 aa		7.66	□□□□□ -1.18
UBP13	YBL067C	BMS1	Q08965	1183 aa	Known RBP	7.66	□□□□□ -1.18
UBP13	YBL067C	NSI1	Q12457	570 aa		7.66	□□□□□ -1.18
UBP13	YBL067C	MIS1	P09440	975 aa	Known RBP	7.66	□□□□□ -1.18
UBP13	YBL067C	ROX1	P25042	368 aa		7.66	□□□□□ -1.18
UBP13	YBL067C	NAM7	P30771	971 aa	Known RBP	7.66	□□□□□ -1.18
UBP13	YBL067C	FUN30	P31380	1131 aa		7.66	□□□□□ -1.18
UBP13	YBL067C	CTM1	P38818	585 aa		7.66	□□□□□ -1.18
UBP13	YBL067C	YER034W	P40022	185 aa	Known RBP	7.66	□□□□□ -1.18
UBP13	YBL067C	CIR1	P42940	261 aa		7.66	□□□□□ -1.18
UBP13	YBL067C	GYP8	P43570	497 aa		7.66	□□□□□ -1.18
UBP13	YBL067C	SAP155	P43612	1002 aa		7.66	□□□□□ -1.18
UBP13	YBL067C	SPO74	P45819	413 aa		7.66	□□□□□ -1.18
UBP13	YBL067C	MNP1	P53163	194 aa	Predicted RBP	7.66	□□□□□ -1.18
UBP13	YBL067C	RIA1	P53893	1110 aa		7.66	□□□□□ -1.18
UBP13	YBL067C	OLE1	P21147	510 aa	Known RBP	7.65	□□□□□ -1.18
UBP13	YBL067C	FTH1	P38310	465 aa		7.65	□□□□□ -1.18
UBP13	YBL067C	YIL161W	P40449	235 aa	Known RBP	7.65	□□□□□ -1.18
UBP13	YBL067C	ALG2	P43636	503 aa		7.65	□□□□□ -1.18
UBP13	YBL067C	ARP7	Q12406	477 aa		7.65	□□□□□ -1.18
UBP13	YBL067C	FRE6	Q12473	712 aa		7.65	□□□□□ -1.18
UBP13	YBL067C	APE1	P14904	514 aa		7.64	□□□□□ -1.19
UBP13	YBL067C	CKA1	P15790	372 aa		7.64	□□□□□ -1.19
UBP13	YBL067C	HOP1	P20050	605 aa		7.64	□□□□□ -1.19
UBP13	YBL067C	LCB1	P25045	558 aa	Known RBP	7.64	□□□□□ -1.19
UBP13	YBL067C	MCD4	P36051	919 aa		7.64	□□□□□ -1.19
UBP13	YBL067C	IFA38	P38286	347 aa		7.64	□□□□□ -1.19
UBP13	YBL067C	RFC1	P38630	861 aa	Known RBP	7.64	□□□□□ -1.19
UBP13	YBL067C	RGA1	P39083	1007 aa		7.64	□□□□□ -1.19
UBP13	YBL067C	LAM5	P43560	674 aa		7.64	□□□□□ -1.19
UBP13	YBL067C	CAF16	P43569	289 aa		7.64	□□□□□ -1.19
UBP13	YBL067C	FYV8	P46949	817 aa	Known RBP	7.64	□□□□□ -1.19
UBP13	YBL067C	CCM1	P48237	864 aa	Predicted RBP	7.64	□□□□□ -1.19
UBP13	YBL067C	HST1	P53685	503 aa		7.64	□□□□□ -1.19
UBP13	YBL067C	VHS3	Q08438	674 aa		7.64	□□□□□ -1.19
UBP13	YBL067C	MPC54	Q08550	464 aa		7.64	□□□□□ -1.19
UBP13	YBL067C	RPS21B	Q3E754	87 aa	Known RBP	7.64	□□□□□ -1.19
UBP13	YBL067C	LEU1	P07264	779 aa	Known RBP	7.64	□□□□□ -1.19
UBP13	YBL067C	GPI10	P30777	616 aa		7.64	□□□□□ -1.19
UBP13	YBL067C	SEG2	P34250	1132 aa		7.64	□□□□□ -1.19
UBP13	YBL067C	FAT1	P38225	669 aa		7.64	□□□□□ -1.19
UBP13	YBL067C	AIP1	P46680	615 aa	Known RBP	7.64	□□□□□ -1.19
UBP13	YBL067C	YPL107W	Q02873	248 aa		7.64	□□□□□ -1.19
UBP13	YBL067C	RUD3	Q12234	484 aa	Known RBP	7.64	□□□□□ -1.19
UBP13	YBL067C	SES1	P07284	462 aa	Known RBP	7.63	□□□□□ -1.19
UBP13	YBL067C	RTS1	P38903	757 aa		7.63	□□□□□ -1.19
UBP13	YBL067C	SLD3	P53135	668 aa		7.63	□□□□□ -1.19
UBP13	YBL067C	HAS1	Q03532	505 aa	Known RBP	7.63	□□□□□ -1.19
UBP13	YBL067C	SKY1	Q03656	742 aa		7.63	□□□□□ -1.19
UBP13	YBL067C	DPL1	Q05567	589 aa		7.63	□□□□□ -1.19
UBP13	YBL067C	HTA1	P04911	132 aa	Known RBP	7.63	□□□□□ -1.19
UBP13	YBL067C	HTA2	P04912	132 aa		7.63	□□□□□ -1.19
UBP13	YBL067C	MTF2	P10849	440 aa		7.63	□□□□□ -1.19
UBP13	YBL067C	MDL1	P33310	695 aa		7.63	□□□□□ -1.19
UBP13	YBL067C	BSD2	P38356	321 aa		7.63	□□□□□ -1.19
UBP13	YBL067C	YHR131C	P38835	850 aa		7.63	□□□□□ -1.19
UBP13	YBL067C	LCB2	P40970	561 aa		7.63	□□□□□ -1.19
UBP13	YBL067C	STU2	P46675	888 aa		7.63	□□□□□ -1.19
UBP13	YBL067C	DPB4	Q04603	196 aa	Known RBP	7.63	□□□□□ -1.19
UBP13	YBL067C	OMS1	Q06668	471 aa		7.63	□□□□□ -1.19
UBP13	YBL067C	YDL073W	Q07454	984 aa		7.63	□□□□□ -1.19
UBP13	YBL067C	DIT1	P21623	536 aa		7.62	□□□□□ -1.19
UBP13	YBL067C	ADP1	P25371	1049 aa		7.62	□□□□□ -1.19
UBP13	YBL067C	SLA1	P32790	1244 aa		7.62	□□□□□ -1.19
UBP13	YBL067C	MIC60	P36112	540 aa		7.62	□□□□□ -1.19

Retrieved 100 of 5,963 RNA–protein pairs in 94.6 ms