RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 STRIP2Q9ULQ0 834 aa9.91□□□□□ -0.82
SMARCA2-243ENST00000635590 A6NJY4 79 aa9.91□□□□□ -0.82
SMARCA2-243ENST00000635590 BHMG1C9JSJ3 638 aaPredicted RBP9.91□□□□□ -0.82
SMARCA2-243ENST00000635590 HOXB1P14653 301 aaPredicted RBP9.91□□□□□ -0.82
SMARCA2-243ENST00000635590 DGKZQ13574 1117 aa9.91□□□□□ -0.82
SMARCA2-243ENST00000635590 GPR152Q8TDT2 470 aa9.91□□□□□ -0.82
SMARCA2-243ENST00000635590 CCDC74AQ96AQ1 378 aa9.91□□□□□ -0.82
SMARCA2-243ENST00000635590 C8orf48Q96LL4 319 aa9.91□□□□□ -0.82
SMARCA2-243ENST00000635590 RPS6KC1Q96S38 1066 aa9.91□□□□□ -0.82
SMARCA2-243ENST00000635590 RAD54L2Q9Y4B4 1467 aa9.9□□□□□ -0.82
SMARCA2-243ENST00000635590 SYNJ1O43426 1573 aa9.9□□□□□ -0.82
SMARCA2-243ENST00000635590 ERBB3P21860 1342 aa9.9□□□□□ -0.82
SMARCA2-243ENST00000635590 HCLS1P14317 486 aaPredicted RBP9.9□□□□□ -0.82
SMARCA2-243ENST00000635590 PCSK2P16519 638 aa9.9□□□□□ -0.82
SMARCA2-243ENST00000635590 MTFR1Q15390 333 aa9.9□□□□□ -0.82
SMARCA2-243ENST00000635590 C11orf91Q3C1V1 193 aa9.9□□□□□ -0.82
SMARCA2-243ENST00000635590 POTEAQ6S8J7 498 aa9.9□□□□□ -0.82
SMARCA2-243ENST00000635590 PGBD3Q8N328 593 aa9.9□□□□□ -0.82
SMARCA2-243ENST00000635590 CNTN3Q9P232 1028 aa9.9□□□□□ -0.82
SMARCA2-243ENST00000635590 SNAPC4Q5SXM2 1469 aa9.9□□□□□ -0.82
SMARCA2-243ENST00000635590 SOX9P48436 509 aa9.89□□□□□ -0.83
SMARCA2-243ENST00000635590 INTS6LQ5JSJ4 861 aaKnown RBP9.89□□□□□ -0.83
SMARCA2-243ENST00000635590 EAF1Q96JC9 268 aaPredicted RBP9.89□□□□□ -0.83
SMARCA2-243ENST00000635590 UBA5Q9GZZ9 404 aa9.89□□□□□ -0.83
SMARCA2-243ENST00000635590 EID1Q9Y6B2 187 aa9.89□□□□□ -0.83
SMARCA2-243ENST00000635590 WDR97A6NE52 1622 aa9.89□□□□□ -0.83
SMARCA2-243ENST00000635590 MAGI1Q96QZ7 1491 aaPredicted RBP9.89□□□□□ -0.83
SMARCA2-243ENST00000635590 PPFIA4O75335 1185 aa9.89□□□□□ -0.83
SMARCA2-243ENST00000635590 HSP90AB4PQ58FF6 505 aa9.89□□□□□ -0.83
SMARCA2-243ENST00000635590 TSHZ1Q6ZSZ6 1077 aa9.89□□□□□ -0.83
SMARCA2-243ENST00000635590 IFT43Q96FT9 208 aa9.89□□□□□ -0.83
SMARCA2-243ENST00000635590 HOMER2Q9NSB8 354 aa9.89□□□□□ -0.83
SMARCA2-243ENST00000635590 TMEM260Q9NX78 707 aa9.89□□□□□ -0.83
SMARCA2-243ENST00000635590 PRKAG3Q9UGI9 489 aa9.89□□□□□ -0.83
SMARCA2-243ENST00000635590 AXIN2Q9Y2T1 843 aa9.89□□□□□ -0.83
SMARCA2-243ENST00000635590 MSRB2Q9Y3D2 182 aa9.89□□□□□ -0.83
SMARCA2-243ENST00000635590 USP3Q9Y6I4 520 aa9.89□□□□□ -0.83
SMARCA2-243ENST00000635590 ANAPC16Q96DE5 110 aa9.88□□□□□ -0.83
SMARCA2-243ENST00000635590 CEP89Q96ST8 783 aa9.88□□□□□ -0.83
SMARCA2-243ENST00000635590 RSRP1Q9BUV0 290 aa9.88□□□□□ -0.83
SMARCA2-243ENST00000635590 KLK14Q9P0G3 267 aa9.88□□□□□ -0.83
SMARCA2-243ENST00000635590 R3HCC1Q9Y3T6 440 aaKnown RBP9.88□□□□□ -0.83
SMARCA2-243ENST00000635590 CENPBP07199 599 aaPredicted RBP9.87□□□□□ -0.83
SMARCA2-243ENST00000635590 VIL1P09327 827 aaKnown RBP9.87□□□□□ -0.83
SMARCA2-243ENST00000635590 SMTNP53814 917 aa9.87□□□□□ -0.83
SMARCA2-243ENST00000635590 PPP4CP60510 307 aa9.87□□□□□ -0.83
SMARCA2-243ENST00000635590 SH3PXD2AQ5TCZ1 1133 aa9.87□□□□□ -0.83
SMARCA2-243ENST00000635590 RAVER1Q8IY67 606 aaKnown RBP9.87□□□□□ -0.83
SMARCA2-243ENST00000635590 FEZ1Q99689 392 aa9.87□□□□□ -0.83
SMARCA2-243ENST00000635590 CCDC113Q9H0I3 377 aa9.87□□□□□ -0.83
SMARCA2-243ENST00000635590 CHMP3Q9Y3E7 222 aa9.87□□□□□ -0.83
SMARCA2-243ENST00000635590 F6X3S4 739 aa9.86□□□□□ -0.83
SMARCA2-243ENST00000635590 SQSTM1Q13501 440 aa9.86□□□□□ -0.83
SMARCA2-243ENST00000635590 TKFCQ3LXA3 575 aa9.86□□□□□ -0.83
SMARCA2-243ENST00000635590 NXPE4Q6UWF7 544 aa9.86□□□□□ -0.83
SMARCA2-243ENST00000635590 C16orf86Q6ZW13 317 aa9.86□□□□□ -0.83
SMARCA2-243ENST00000635590 EMID1Q96A84 441 aaPredicted RBP9.86□□□□□ -0.83
SMARCA2-243ENST00000635590 NOC4LQ9BVI4 516 aaKnown RBP9.86□□□□□ -0.83
SMARCA2-243ENST00000635590 GRIN2BQ13224 1484 aa9.86□□□□□ -0.83
SMARCA2-243ENST00000635590 GAPVD1Q14C86 1478 aa9.86□□□□□ -0.83
SMARCA2-243ENST00000635590 EVA1CP58658 441 aa9.86□□□□□ -0.83
SMARCA2-243ENST00000635590 SPTY2D1Q68D10 685 aaPredicted RBP9.86□□□□□ -0.83
SMARCA2-243ENST00000635590 ALDH16A1Q8IZ83 802 aa9.86□□□□□ -0.83
SMARCA2-243ENST00000635590 TTC16Q8NEE8 873 aa9.86□□□□□ -0.83
SMARCA2-243ENST00000635590 SRCIN1Q9C0H9 1055 aa9.86□□□□□ -0.83
SMARCA2-243ENST00000635590 SYNJ2O15056 1496 aa9.86□□□□□ -0.83
SMARCA2-243ENST00000635590 MINDY4BA8MYZ0 360 aa9.85□□□□□ -0.83
SMARCA2-243ENST00000635590 EML1O00423 815 aa9.85□□□□□ -0.83
SMARCA2-243ENST00000635590 RTN1Q16799 776 aa9.85□□□□□ -0.83
SMARCA2-243ENST00000635590 CELF2-AS1Q8N7Q2 184 aa9.85□□□□□ -0.83
SMARCA2-243ENST00000635590 CPLX3Q8WVH0 158 aa9.85□□□□□ -0.83
SMARCA2-243ENST00000635590 TSR2Q969E8 191 aaKnown RBP9.85□□□□□ -0.83
SMARCA2-243ENST00000635590 FOXD3Q9UJU5 478 aaPredicted RBP9.85□□□□□ -0.83
SMARCA2-243ENST00000635590 EIF4A3P38919 411 aaKnown RBP9.84□□□□□ -0.83
SMARCA2-243ENST00000635590 MAP9Q49MG5 647 aa9.84□□□□□ -0.83
SMARCA2-243ENST00000635590 TREML1Q86YW5 311 aa9.84□□□□□ -0.83
SMARCA2-243ENST00000635590 TCEAL9Q9UHQ7 104 aa9.84□□□□□ -0.83
SMARCA2-243ENST00000635590 LEMD3Q9Y2U8 911 aa9.84□□□□□ -0.83
SMARCA2-243ENST00000635590 PAX3P23760 479 aa9.84□□□□□ -0.83
SMARCA2-243ENST00000635590 CDKN1CP49918 316 aaPredicted RBP9.84□□□□□ -0.83
SMARCA2-243ENST00000635590 C4orf46Q504U0 113 aa9.84□□□□□ -0.83
SMARCA2-243ENST00000635590 HPS5Q9UPZ3 1129 aa9.84□□□□□ -0.83
SMARCA2-243ENST00000635590 FGD5Q6ZNL6 1462 aa9.83□□□□□ -0.84
SMARCA2-243ENST00000635590 HIRAP54198 1017 aaPredicted RBP9.83□□□□□ -0.84
SMARCA2-243ENST00000635590 JAMLQ86YT9 394 aa9.83□□□□□ -0.84
SMARCA2-243ENST00000635590 MRPL50Q8N5N7 158 aaKnown RBP9.83□□□□□ -0.84
SMARCA2-243ENST00000635590 ZNF296Q8WUU4 475 aaPredicted RBP9.83□□□□□ -0.84
SMARCA2-243ENST00000635590 BCO2Q9BYV7 579 aa9.83□□□□□ -0.84
SMARCA2-243ENST00000635590 TMPRSS4Q9NRS4 437 aa9.83□□□□□ -0.84
SMARCA2-243ENST00000635590 SERTM1A2A2V5 107 aa9.82□□□□□ -0.84
SMARCA2-243ENST00000635590 TNFRSF21O75509 655 aa9.82□□□□□ -0.84
SMARCA2-243ENST00000635590 POTEIP0CG38 1075 aa9.82□□□□□ -0.84
SMARCA2-243ENST00000635590 WNT7BP56706 349 aa9.82□□□□□ -0.84
SMARCA2-243ENST00000635590 EXOSC10Q01780 885 aaKnown RBP9.82□□□□□ -0.84
SMARCA2-243ENST00000635590 IFRD2Q12894 506 aaPredicted RBP9.82□□□□□ -0.84
SMARCA2-243ENST00000635590 COL9A2Q14055 689 aaPredicted RBP9.82□□□□□ -0.84
SMARCA2-243ENST00000635590 RELL1Q8IUW5 271 aa9.82□□□□□ -0.84
SMARCA2-243ENST00000635590 TEX2Q8IWB9 1127 aa9.82□□□□□ -0.84
SMARCA2-243ENST00000635590 TERF2IPQ9NYB0 399 aa9.82□□□□□ -0.84
SMARCA2-243ENST00000635590 HCN4Q9Y3Q4 1203 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms