RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 CSRNP1Q96S65 589 aa6.88□□□□□ -1.31
HTT-210ENST00000512909 RBSNQ9H1K0 784 aa6.88□□□□□ -1.31
HTT-210ENST00000512909 DNAJC25Q9H1X3 360 aa6.88□□□□□ -1.31
HTT-210ENST00000512909 GGNBP2Q9H3C7 697 aa6.88□□□□□ -1.31
HTT-210ENST00000512909 PPP4R2Q9NY27 417 aa6.88□□□□□ -1.31
HTT-210ENST00000512909 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.88□□□□□ -1.31
HTT-210ENST00000512909 GPR25O00155 361 aa6.87□□□□□ -1.31
HTT-210ENST00000512909 BNIP3LO60238 219 aa6.87□□□□□ -1.31
HTT-210ENST00000512909 P4HBP07237 508 aaKnown RBP6.87□□□□□ -1.31
HTT-210ENST00000512909 NXF1Q9UBU9 619 aaKnown RBP6.87□□□□□ -1.31
HTT-210ENST00000512909 RBM47A0AV96 593 aaKnown RBP6.86□□□□□ -1.31
HTT-210ENST00000512909 FAM177BA6PVY3 158 aa6.86□□□□□ -1.31
HTT-210ENST00000512909 GPR182O15218 404 aa6.86□□□□□ -1.31
HTT-210ENST00000512909 GADD45BO75293 160 aaPredicted RBP6.86□□□□□ -1.31
HTT-210ENST00000512909 TNFRSF21O75509 655 aa6.86□□□□□ -1.31
HTT-210ENST00000512909 NFKB1P19838 968 aa6.86□□□□□ -1.31
HTT-210ENST00000512909 MX2P20592 715 aa6.86□□□□□ -1.31
HTT-210ENST00000512909 KCNQ4P56696 695 aa6.86□□□□□ -1.31
HTT-210ENST00000512909 PSMD2Q13200 908 aa6.86□□□□□ -1.31
HTT-210ENST00000512909 PCSK7Q16549 785 aa6.86□□□□□ -1.31
HTT-210ENST00000512909 KLRG1Q96E93 195 aa6.86□□□□□ -1.31
HTT-210ENST00000512909 CUEDC1Q9NWM3 386 aaPredicted RBP6.86□□□□□ -1.31
HTT-210ENST00000512909 SPG7Q9UQ90 795 aa6.86□□□□□ -1.31
HTT-210ENST00000512909 KCNMB2Q9Y691 235 aa6.86□□□□□ -1.31
HTT-210ENST00000512909 EIF1AYO14602 144 aaKnown RBP6.85□□□□□ -1.31
HTT-210ENST00000512909 PRPF40AO75400 957 aaKnown RBP6.85□□□□□ -1.31
HTT-210ENST00000512909 XKR5Q6UX68 686 aa6.85□□□□□ -1.31
HTT-210ENST00000512909 NCAPG2Q86XI2 1143 aa6.85□□□□□ -1.31
HTT-210ENST00000512909 MICALL1Q8N3F8 863 aa6.85□□□□□ -1.31
HTT-210ENST00000512909 UBE2OQ9C0C9 1292 aaKnown RBP6.85□□□□□ -1.31
HTT-210ENST00000512909 EFSO43281 561 aa6.84□□□□□ -1.31
HTT-210ENST00000512909 EGFRP00533 1210 aa6.84□□□□□ -1.31
HTT-210ENST00000512909 EDN3P14138 238 aa6.84□□□□□ -1.31
HTT-210ENST00000512909 ZNF16P17020 682 aaPredicted RBP6.84□□□□□ -1.31
HTT-210ENST00000512909 TARSP26639 723 aaKnown RBP6.84□□□□□ -1.31
HTT-210ENST00000512909 VEGFBP49765 207 aa6.84□□□□□ -1.31
HTT-210ENST00000512909 PLAURQ03405 335 aa6.84□□□□□ -1.31
HTT-210ENST00000512909 FMR1Q06787 632 aaKnown RBP eCLIP6.84□□□□□ -1.31
HTT-210ENST00000512909 HYAL2Q12891 473 aa6.84□□□□□ -1.31
HTT-210ENST00000512909 ORC1Q13415 861 aa6.84□□□□□ -1.31
HTT-210ENST00000512909 TRIP4Q15650 581 aaPredicted RBP6.84□□□□□ -1.31
HTT-210ENST00000512909 NPAS3Q8IXF0 933 aa6.84□□□□□ -1.31
HTT-210ENST00000512909 FBF1Q8TES7 1133 aa6.84□□□□□ -1.31
HTT-210ENST00000512909 FRMD6Q96NE9 622 aa6.84□□□□□ -1.31
HTT-210ENST00000512909 GSX2Q9BZM3 304 aa6.84□□□□□ -1.31
HTT-210ENST00000512909 FOXD3Q9UJU5 478 aaPredicted RBP6.84□□□□□ -1.31
HTT-210ENST00000512909 GHRHP01286 108 aa6.83□□□□□ -1.32
HTT-210ENST00000512909 MAP2K3P46734 347 aa6.83□□□□□ -1.32
HTT-210ENST00000512909 DSC3Q14574 896 aa6.83□□□□□ -1.32
HTT-210ENST00000512909 ENOX2Q16206 610 aaKnown RBP6.83□□□□□ -1.32
HTT-210ENST00000512909 FAM182BQ5T319 152 aa6.83□□□□□ -1.32
HTT-210ENST00000512909 RAB44Q7Z6P3 723 aaPredicted RBP6.83□□□□□ -1.32
HTT-210ENST00000512909 ZFYVE28Q9HCC9 887 aa6.83□□□□□ -1.32
HTT-210ENST00000512909 TMEM63CQ9P1W3 806 aa6.83□□□□□ -1.32
HTT-210ENST00000512909 VTI1BQ9UEU0 232 aa6.83□□□□□ -1.32
HTT-210ENST00000512909 ALAS2P22557 587 aa6.82□□□□□ -1.32
HTT-210ENST00000512909 NANOS1Q8WY41 292 aaKnown RBP6.82□□□□□ -1.32
HTT-210ENST00000512909 MRRFQ96E11 262 aaKnown RBP6.82□□□□□ -1.32
HTT-210ENST00000512909 DUSP9Q99956 384 aaKnown RBP6.82□□□□□ -1.32
HTT-210ENST00000512909 STRN4Q9NRL3 753 aa6.82□□□□□ -1.32
HTT-210ENST00000512909 SORBS3O60504 671 aa6.81□□□□□ -1.32
HTT-210ENST00000512909 POLR3DP05423 398 aaPredicted RBP6.81□□□□□ -1.32
HTT-210ENST00000512909 EIF4BP23588 611 aaKnown RBP6.81□□□□□ -1.32
HTT-210ENST00000512909 DHX32Q7L7V1 743 aaKnown RBP6.81□□□□□ -1.32
HTT-210ENST00000512909 C1orf127Q8N9H9 656 aa6.81□□□□□ -1.32
HTT-210ENST00000512909 IRF7Q92985 503 aa6.81□□□□□ -1.32
HTT-210ENST00000512909 CCDC74AQ96AQ1 378 aa6.81□□□□□ -1.32
HTT-210ENST00000512909 SLC30A3Q99726 388 aa6.81□□□□□ -1.32
HTT-210ENST00000512909 NDFIP2Q9NV92 336 aa6.81□□□□□ -1.32
HTT-210ENST00000512909 TLR7Q9NYK1 1049 aaKnown RBP6.81□□□□□ -1.32
HTT-210ENST00000512909 KANSL3Q9P2N6 904 aa6.81□□□□□ -1.32
HTT-210ENST00000512909 PARP2Q9UGN5 583 aa6.81□□□□□ -1.32
HTT-210ENST00000512909 POTECB2RU33 542 aa6.8□□□□□ -1.32
HTT-210ENST00000512909 GIPC1O14908 333 aa6.8□□□□□ -1.32
HTT-210ENST00000512909 MMP20O60882 483 aa6.8□□□□□ -1.32
HTT-210ENST00000512909 MAP3K6O95382 1288 aa6.8□□□□□ -1.32
HTT-210ENST00000512909 ADH6P28332 368 aa6.8□□□□□ -1.32
HTT-210ENST00000512909 CTBSQ01459 385 aa6.8□□□□□ -1.32
HTT-210ENST00000512909 SYT9Q86SS6 491 aa6.8□□□□□ -1.32
HTT-210ENST00000512909 OR13H1Q8NG92 308 aa6.8□□□□□ -1.32
HTT-210ENST00000512909 NSUN5Q96P11 429 aaKnown RBP6.8□□□□□ -1.32
HTT-210ENST00000512909 EHD4Q9H223 541 aa6.8□□□□□ -1.32
HTT-210ENST00000512909 MBIPQ9NS73 344 aa6.8□□□□□ -1.32
HTT-210ENST00000512909 WWC3Q9ULE0 1092 aa6.8□□□□□ -1.32
HTT-210ENST00000512909 TRAK1Q9UPV9 953 aa6.8□□□□□ -1.32
HTT-210ENST00000512909 RB1CC1Q8TDY2 1594 aa6.79□□□□□ -1.32
HTT-210ENST00000512909 EREGO14944 169 aa6.79□□□□□ -1.32
HTT-210ENST00000512909 THBS1P07996 1170 aa6.79□□□□□ -1.32
HTT-210ENST00000512909 EIF2AK2P19525 551 aaKnown RBP6.79□□□□□ -1.32
HTT-210ENST00000512909 GNA15P30679 374 aa6.79□□□□□ -1.32
HTT-210ENST00000512909 PCBP4P57723 403 aaKnown RBP6.79□□□□□ -1.32
HTT-210ENST00000512909 FBXO33Q7Z6M2 555 aa6.79□□□□□ -1.32
HTT-210ENST00000512909 ZNF428Q96B54 188 aa6.79□□□□□ -1.32
HTT-210ENST00000512909 CNTN3Q9P232 1028 aa6.79□□□□□ -1.32
HTT-210ENST00000512909 H3BM21 787 aa6.78□□□□□ -1.32
HTT-210ENST00000512909 TERTO14746 1132 aaKnown RBP6.78□□□□□ -1.32
HTT-210ENST00000512909 SOX18P35713 384 aa6.78□□□□□ -1.32
HTT-210ENST00000512909 NRLP54845 237 aa6.78□□□□□ -1.32
HTT-210ENST00000512909 MLLT1Q03111 559 aaPredicted RBP6.78□□□□□ -1.32
HTT-210ENST00000512909 UBAP2LQ14157 1087 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms