RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 AEBP2Q6ZN18 517 aaPredicted RBP18.46■□□□□ 0.55
HTT-210ENST00000512909 CHIC1Q5VXU3 224 aa18.32■□□□□ 0.52
HTT-210ENST00000512909 PHF23Q9BUL5 403 aaPredicted RBP16.02■□□□□ 0.16
HTT-210ENST00000512909 SENP3Q9H4L4 574 aaPredicted RBP15.88■□□□□ 0.13
HTT-210ENST00000512909 PLPPR3Q6T4P5 718 aa15.12■□□□□ 0.01
HTT-210ENST00000512909 FOXD1Q16676 465 aa14.77□□□□□ -0.05
HTT-210ENST00000512909 ADRA2BP18089 450 aa14.15□□□□□ -0.14
HTT-210ENST00000512909 POTEDQ86YR6 584 aa14.05□□□□□ -0.16
HTT-210ENST00000512909 PPP6R1Q9UPN7 881 aa14.04□□□□□ -0.16
HTT-210ENST00000512909 MSH5O43196 834 aa13.99□□□□□ -0.17
HTT-210ENST00000512909 PIAS4Q8N2W9 510 aaPredicted RBP13.83□□□□□ -0.2
HTT-210ENST00000512909 PPP4R3CPQ6ZMV5 832 aa13.32□□□□□ -0.28
HTT-210ENST00000512909 KCNA4P22459 653 aa13.27□□□□□ -0.29
HTT-210ENST00000512909 NCBP3Q53F19 620 aaKnown RBP13.21□□□□□ -0.29
HTT-210ENST00000512909 SCAF1Q9H7N4 1312 aaKnown RBP13.17□□□□□ -0.3
HTT-210ENST00000512909 CNKSR2Q8WXI2 1034 aa12.91□□□□□ -0.34
HTT-210ENST00000512909 EHMT2Q96KQ7 1210 aa12.82□□□□□ -0.36
HTT-210ENST00000512909 SLC4A1APQ9BWU0 796 aaKnown RBP12.82□□□□□ -0.36
HTT-210ENST00000512909 NPM3O75607 178 aaKnown RBP12.8□□□□□ -0.36
HTT-210ENST00000512909 MAPK8IP2Q13387 824 aaPredicted RBP12.72□□□□□ -0.37
HTT-210ENST00000512909 RNF216Q9NWF9 866 aaPredicted RBP12.55□□□□□ -0.4
HTT-210ENST00000512909 DMRT2Q9Y5R5 561 aa12.52□□□□□ -0.41
HTT-210ENST00000512909 CSRNP3Q8WYN3 585 aa12.36□□□□□ -0.43
HTT-210ENST00000512909 HOXD11P31277 338 aaPredicted RBP12.35□□□□□ -0.43
HTT-210ENST00000512909 DNAJC5BQ9UF47 199 aa12.27□□□□□ -0.45
HTT-210ENST00000512909 FOXD4L1Q9NU39 408 aa12.22□□□□□ -0.45
HTT-210ENST00000512909 DCAF8L1A6NGE4 600 aa12.21□□□□□ -0.45
HTT-210ENST00000512909 CACNB1Q02641 598 aaPredicted RBP12.15□□□□□ -0.46
HTT-210ENST00000512909 ZBTB22O15209 634 aa12.1□□□□□ -0.47
HTT-210ENST00000512909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.98□□□□□ -0.49
HTT-210ENST00000512909 MYCNP04198 464 aaPredicted RBP11.94□□□□□ -0.5
HTT-210ENST00000512909 SLC4A2P04920 1241 aa11.94□□□□□ -0.5
HTT-210ENST00000512909 RNF39Q9H2S5 420 aa11.88□□□□□ -0.51
HTT-210ENST00000512909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.81□□□□□ -0.52
HTT-210ENST00000512909 HNRNPUL2Q1KMD3 747 aaKnown RBP11.81□□□□□ -0.52
HTT-210ENST00000512909 ATXN8OSP0DMR3 200 aa11.76□□□□□ -0.53
HTT-210ENST00000512909 C1QBPQ07021 282 aaKnown RBP11.72□□□□□ -0.53
HTT-210ENST00000512909 SAMD1Q6SPF0 538 aaPredicted RBP11.72□□□□□ -0.53
HTT-210ENST00000512909 APLP2Q06481 763 aa11.69□□□□□ -0.54
HTT-210ENST00000512909 U3KPZ7 1027 aaPredicted RBP11.62□□□□□ -0.55
HTT-210ENST00000512909 ATF5Q9Y2D1 282 aaPredicted RBP11.4□□□□□ -0.58
HTT-210ENST00000512909 CAPN15O75808 1086 aa11.35□□□□□ -0.59
HTT-210ENST00000512909 TRHP20396 242 aaPredicted RBP11.35□□□□□ -0.59
HTT-210ENST00000512909 ZNF219Q9P2Y4 722 aaPredicted RBP11.35□□□□□ -0.59
HTT-210ENST00000512909 FKBP8Q14318 412 aa11.31□□□□□ -0.6
HTT-210ENST00000512909 SPINK5Q9NQ38 1064 aaPredicted RBP11.22□□□□□ -0.61
HTT-210ENST00000512909 FBLN2P98095 1184 aa11.21□□□□□ -0.61
HTT-210ENST00000512909 POLA2Q14181 598 aa11.15□□□□□ -0.62
HTT-210ENST00000512909 ZBTB12Q9Y330 459 aaPredicted RBP11.11□□□□□ -0.63
HTT-210ENST00000512909 ABCB7O75027 752 aa11.08□□□□□ -0.64
HTT-210ENST00000512909 DSG3P32926 999 aa11.03□□□□□ -0.64
HTT-210ENST00000512909 SPDYE4A6NLX3 237 aa11.01□□□□□ -0.65
HTT-210ENST00000512909 POTEHQ6S545 545 aa10.97□□□□□ -0.65
HTT-210ENST00000512909 MKRN4PQ13434 485 aaPredicted RBP10.93□□□□□ -0.66
HTT-210ENST00000512909 FBXO3Q9UK99 471 aa10.92□□□□□ -0.66
HTT-210ENST00000512909 AMER1Q5JTC6 1135 aaPredicted RBP10.87□□□□□ -0.67
HTT-210ENST00000512909 ZNF692Q9BU19 519 aaPredicted RBP10.79□□□□□ -0.68
HTT-210ENST00000512909 SPDYE2BA6NHP3 402 aa10.75□□□□□ -0.69
HTT-210ENST00000512909 SPDYE6P0CI01 402 aa10.75□□□□□ -0.69
HTT-210ENST00000512909 SPDYE2Q495Y8 402 aa10.75□□□□□ -0.69
HTT-210ENST00000512909 OSCARQ8IYS5 282 aa10.74□□□□□ -0.69
HTT-210ENST00000512909 RTN4Q9NQC3 1192 aaKnown RBP10.7□□□□□ -0.7
HTT-210ENST00000512909 PROM2Q8N271 834 aa10.66□□□□□ -0.7
HTT-210ENST00000512909 VASPP50552 380 aaPredicted RBP10.64□□□□□ -0.71
HTT-210ENST00000512909 PABPN1Q86U42 306 aaKnown RBP eCLIP10.62□□□□□ -0.71
HTT-210ENST00000512909 RBM42Q9BTD8 480 aaKnown RBP10.6□□□□□ -0.71
HTT-210ENST00000512909 STAG3Q9UJ98 1225 aa10.6□□□□□ -0.71
HTT-210ENST00000512909 PLEKHG5O94827 1062 aa10.58□□□□□ -0.72
HTT-210ENST00000512909 SSUH2Q9Y2M2 353 aa10.58□□□□□ -0.72
HTT-210ENST00000512909 KLHL34Q8N239 644 aa10.57□□□□□ -0.72
HTT-210ENST00000512909 PLCD3Q8N3E9 789 aa10.56□□□□□ -0.72
HTT-210ENST00000512909 MIER1Q8N108 512 aa10.5□□□□□ -0.73
HTT-210ENST00000512909 IFNLR1Q8IU57 520 aaPredicted RBP10.43□□□□□ -0.74
HTT-210ENST00000512909 ZBTB47Q9UFB7 747 aaPredicted RBP10.43□□□□□ -0.74
HTT-210ENST00000512909 CHRDL2Q6WN34 429 aa10.42□□□□□ -0.74
HTT-210ENST00000512909 AKT1S1Q96B36 256 aa10.42□□□□□ -0.74
HTT-210ENST00000512909 DCAF8L2P0C7V8 631 aa10.41□□□□□ -0.74
HTT-210ENST00000512909 SPDYE1Q8NFV5 336 aaPredicted RBP10.41□□□□□ -0.74
HTT-210ENST00000512909 SPOCK2Q92563 424 aa10.41□□□□□ -0.74
HTT-210ENST00000512909 CLEC11AQ9Y240 323 aa10.4□□□□□ -0.74
HTT-210ENST00000512909 PRR29P0C7W0 189 aa10.32□□□□□ -0.76
HTT-210ENST00000512909 REM2Q8IYK8 340 aaPredicted RBP10.28□□□□□ -0.76
HTT-210ENST00000512909 SLC24A1O60721 1099 aa10.27□□□□□ -0.77
HTT-210ENST00000512909 CIZ1Q9ULV3 898 aaPredicted RBP10.27□□□□□ -0.77
HTT-210ENST00000512909 ECM2O94769 699 aaPredicted RBP10.25□□□□□ -0.77
HTT-210ENST00000512909 PKD2Q13563 968 aa10.17□□□□□ -0.78
HTT-210ENST00000512909 GSE1Q14687 1217 aa10.17□□□□□ -0.78
HTT-210ENST00000512909 SP7Q8TDD2 431 aaPredicted RBP10.17□□□□□ -0.78
HTT-210ENST00000512909 NPM1P06748 294 aaKnown RBP eCLIP10.15□□□□□ -0.78
HTT-210ENST00000512909 TRIM41Q8WV44 630 aa10.15□□□□□ -0.78
HTT-210ENST00000512909 PITPNM1O00562 1244 aa10.14□□□□□ -0.79
HTT-210ENST00000512909 DCAF8Q5TAQ9 597 aa10.14□□□□□ -0.79
HTT-210ENST00000512909 FAM212AQ96EL1 285 aa10.11□□□□□ -0.79
HTT-210ENST00000512909 PIP4P2Q8N4L2 257 aa10.1□□□□□ -0.79
HTT-210ENST00000512909 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.09□□□□□ -0.79
HTT-210ENST00000512909 CREBZFQ9NS37 354 aa10.08□□□□□ -0.8
HTT-210ENST00000512909 TAOK2Q9UL54 1235 aa10.07□□□□□ -0.8
HTT-210ENST00000512909 HAX1O00165 279 aa10.02□□□□□ -0.81
HTT-210ENST00000512909 RGL2O15211 777 aa10.01□□□□□ -0.81
HTT-210ENST00000512909 FXR2P51116 673 aaKnown RBP eCLIP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms