RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 RGS20O76081 388 aa8.48□□□□□ -1.05
HMGB1P47-201ENST00000511281 F11P03951 625 aa8.48□□□□□ -1.05
HMGB1P47-201ENST00000511281 IRS1P35568 1242 aa8.48□□□□□ -1.05
HMGB1P47-201ENST00000511281 SCARF1Q14162 830 aa8.48□□□□□ -1.05
HMGB1P47-201ENST00000511281 TAF1CQ15572 869 aaPredicted RBP8.48□□□□□ -1.05
HMGB1P47-201ENST00000511281 ANKRD24Q8TF21 1146 aa8.48□□□□□ -1.05
HMGB1P47-201ENST00000511281 SUV39H2Q9H5I1 410 aa8.48□□□□□ -1.05
HMGB1P47-201ENST00000511281 SRA1Q9HD15 236 aaKnown RBP8.48□□□□□ -1.05
HMGB1P47-201ENST00000511281 C6orf118Q5T5N4 469 aa8.47□□□□□ -1.05
HMGB1P47-201ENST00000511281 KIAA0319Q5VV43 1072 aa8.47□□□□□ -1.05
HMGB1P47-201ENST00000511281 HS2ST1Q7LGA3 356 aa8.47□□□□□ -1.05
HMGB1P47-201ENST00000511281 ZNF654Q8IZM8 581 aa8.47□□□□□ -1.05
HMGB1P47-201ENST00000511281 CEP63Q96MT8 703 aa8.47□□□□□ -1.05
HMGB1P47-201ENST00000511281 NPHS2Q9NP85 383 aa8.47□□□□□ -1.05
HMGB1P47-201ENST00000511281 EFSO43281 561 aa8.46□□□□□ -1.06
HMGB1P47-201ENST00000511281 FAM157BP0CG42 384 aa8.46□□□□□ -1.06
HMGB1P47-201ENST00000511281 RHOQP17081 205 aa8.46□□□□□ -1.06
HMGB1P47-201ENST00000511281 GNL2Q13823 731 aaKnown RBP8.46□□□□□ -1.06
HMGB1P47-201ENST00000511281 CTC1Q2NKJ3 1217 aa8.46□□□□□ -1.06
HMGB1P47-201ENST00000511281 ERMP1Q7Z2K6 904 aa8.46□□□□□ -1.06
HMGB1P47-201ENST00000511281 C1orf127Q8N9H9 656 aa8.46□□□□□ -1.06
HMGB1P47-201ENST00000511281 ACBD3Q9H3P7 528 aa8.46□□□□□ -1.06
HMGB1P47-201ENST00000511281 BRD7Q9NPI1 651 aa8.46□□□□□ -1.06
HMGB1P47-201ENST00000511281 CNTN3Q9P232 1028 aa8.46□□□□□ -1.06
HMGB1P47-201ENST00000511281 EREGO14944 169 aa8.45□□□□□ -1.06
HMGB1P47-201ENST00000511281 RACK1P63244 317 aaKnown RBP8.45□□□□□ -1.06
HMGB1P47-201ENST00000511281 TRIM46Q7Z4K8 759 aa8.45□□□□□ -1.06
HMGB1P47-201ENST00000511281 CRIPAKQ8N1N5 446 aa8.45□□□□□ -1.06
HMGB1P47-201ENST00000511281 BCO2Q9BYV7 579 aa8.45□□□□□ -1.06
HMGB1P47-201ENST00000511281 GJA3Q9Y6H8 435 aa8.45□□□□□ -1.06
HMGB1P47-201ENST00000511281 USP17L7P0C7H9 530 aa8.44□□□□□ -1.06
HMGB1P47-201ENST00000511281 MEI1Q5TIA1 1274 aa8.44□□□□□ -1.06
HMGB1P47-201ENST00000511281 PRPF40BQ6NWY9 871 aaKnown RBP8.44□□□□□ -1.06
HMGB1P47-201ENST00000511281 USP48Q86UV5 1035 aa8.44□□□□□ -1.06
HMGB1P47-201ENST00000511281 NOC4LQ9BVI4 516 aaKnown RBP8.44□□□□□ -1.06
HMGB1P47-201ENST00000511281 TANGO6Q9C0B7 1094 aa8.44□□□□□ -1.06
HMGB1P47-201ENST00000511281 EFCC1Q9HA90 598 aa8.44□□□□□ -1.06
HMGB1P47-201ENST00000511281 CAPN10Q9HC96 672 aa8.44□□□□□ -1.06
HMGB1P47-201ENST00000511281 SENP3-EIF4A1A0A087X0R7 540 aa8.43□□□□□ -1.06
HMGB1P47-201ENST00000511281 HOXD8P13378 290 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P47-201ENST00000511281 GJA8P48165 433 aa8.43□□□□□ -1.06
HMGB1P47-201ENST00000511281 LAMC2Q13753 1193 aa8.43□□□□□ -1.06
HMGB1P47-201ENST00000511281 GRM2Q14416 872 aa8.43□□□□□ -1.06
HMGB1P47-201ENST00000511281 ZNF394Q53GI3 561 aa8.43□□□□□ -1.06
HMGB1P47-201ENST00000511281 FIGNL1Q6PIW4 674 aa8.43□□□□□ -1.06
HMGB1P47-201ENST00000511281 NXPE4Q6UWF7 544 aa8.43□□□□□ -1.06
HMGB1P47-201ENST00000511281 PGBD3Q8N328 593 aa8.43□□□□□ -1.06
HMGB1P47-201ENST00000511281 GLIS3Q8NEA6 775 aa8.43□□□□□ -1.06
HMGB1P47-201ENST00000511281 ZCCHC2Q9C0B9 1178 aaKnown RBP8.43□□□□□ -1.06
HMGB1P47-201ENST00000511281 PRKAG2Q9UGJ0 569 aa8.43□□□□□ -1.06
HMGB1P47-201ENST00000511281 TRAK1Q9UPV9 953 aa8.43□□□□□ -1.06
HMGB1P47-201ENST00000511281 KCNH4Q9UQ05 1017 aa8.43□□□□□ -1.06
HMGB1P47-201ENST00000511281 EDN3P14138 238 aa8.42□□□□□ -1.06
HMGB1P47-201ENST00000511281 CES1P23141 567 aa8.42□□□□□ -1.06
HMGB1P47-201ENST00000511281 GSTT1P30711 240 aa8.42□□□□□ -1.06
HMGB1P47-201ENST00000511281 UBAP2LQ14157 1087 aaKnown RBP8.42□□□□□ -1.06
HMGB1P47-201ENST00000511281 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.42□□□□□ -1.06
HMGB1P47-201ENST00000511281 EFHC2Q5JST6 749 aa8.42□□□□□ -1.06
HMGB1P47-201ENST00000511281 C3orf58Q8NDZ4 430 aa8.42□□□□□ -1.06
HMGB1P47-201ENST00000511281 OR13H1Q8NG92 308 aa8.42□□□□□ -1.06
HMGB1P47-201ENST00000511281 RUBCNLQ9H714 662 aa8.42□□□□□ -1.06
HMGB1P47-201ENST00000511281 CUEDC1Q9NWM3 386 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P47-201ENST00000511281 GGT7Q9UJ14 662 aa8.42□□□□□ -1.06
HMGB1P47-201ENST00000511281 DNMT3LQ9UJW3 386 aa8.42□□□□□ -1.06
HMGB1P47-201ENST00000511281 PPM1HQ9ULR3 514 aa8.42□□□□□ -1.06
HMGB1P47-201ENST00000511281 PDZRN3Q9UPQ7 1066 aa8.42□□□□□ -1.06
HMGB1P47-201ENST00000511281 POLR3DP05423 398 aaPredicted RBP8.41□□□□□ -1.06
HMGB1P47-201ENST00000511281 THBS1P07996 1170 aa8.41□□□□□ -1.06
HMGB1P47-201ENST00000511281 SOX18P35713 384 aa8.41□□□□□ -1.06
HMGB1P47-201ENST00000511281 TNNI2P48788 182 aa8.41□□□□□ -1.06
HMGB1P47-201ENST00000511281 TTC39BQ5VTQ0 682 aaPredicted RBP8.41□□□□□ -1.06
HMGB1P47-201ENST00000511281 PEAR1Q5VY43 1037 aaPredicted RBP8.41□□□□□ -1.06
HMGB1P47-201ENST00000511281 GSX2Q9BZM3 304 aa8.41□□□□□ -1.06
HMGB1P47-201ENST00000511281 GPAMQ9HCL2 828 aa8.41□□□□□ -1.06
HMGB1P47-201ENST00000511281 SALL4Q9UJQ4 1053 aa8.41□□□□□ -1.06
HMGB1P47-201ENST00000511281 FIGNL2A6NMB9 653 aa8.4□□□□□ -1.06
HMGB1P47-201ENST00000511281 GADD45BO75293 160 aaPredicted RBP8.4□□□□□ -1.06
HMGB1P47-201ENST00000511281 XRCC5P13010 732 aaKnown RBP8.4□□□□□ -1.06
HMGB1P47-201ENST00000511281 BMP1P13497 986 aa8.4□□□□□ -1.06
HMGB1P47-201ENST00000511281 CCINQ13939 588 aa8.4□□□□□ -1.06
HMGB1P47-201ENST00000511281 ZFP42Q96MM3 310 aa8.4□□□□□ -1.06
HMGB1P47-201ENST00000511281 RSRP1Q9BUV0 290 aa8.4□□□□□ -1.06
HMGB1P47-201ENST00000511281 NDFIP2Q9NV92 336 aa8.4□□□□□ -1.06
HMGB1P47-201ENST00000511281 INPP5FQ9Y2H2 1132 aa8.4□□□□□ -1.06
HMGB1P47-201ENST00000511281 PCDHGB7Q9Y5F8 929 aa8.4□□□□□ -1.06
HMGB1P47-201ENST00000511281 A0A1W2PP55 124 aa8.39□□□□□ -1.07
HMGB1P47-201ENST00000511281 FAM187AA6NFU0 413 aa8.39□□□□□ -1.07
HMGB1P47-201ENST00000511281 KIF4AO95239 1232 aa8.39□□□□□ -1.07
HMGB1P47-201ENST00000511281 MAP3K6O95382 1288 aa8.39□□□□□ -1.07
HMGB1P47-201ENST00000511281 ATP2B1P20020 1258 aa8.39□□□□□ -1.07
HMGB1P47-201ENST00000511281 CANXP27824 592 aaKnown RBP8.39□□□□□ -1.07
HMGB1P47-201ENST00000511281 ARID5AQ03989 594 aa8.39□□□□□ -1.07
HMGB1P47-201ENST00000511281 RBL2Q08999 1139 aa8.39□□□□□ -1.07
HMGB1P47-201ENST00000511281 RASGRP4Q8TDF6 673 aa8.39□□□□□ -1.07
HMGB1P47-201ENST00000511281 PPP4R2Q9NY27 417 aa8.39□□□□□ -1.07
HMGB1P47-201ENST00000511281 PCDHGC4Q9Y5F7 938 aa8.39□□□□□ -1.07
HMGB1P47-201ENST00000511281 ATXN7O15265 892 aaPredicted RBP8.38□□□□□ -1.07
HMGB1P47-201ENST00000511281 DGAT1O75907 488 aa8.38□□□□□ -1.07
HMGB1P47-201ENST00000511281 MAP3K10Q02779 954 aa8.38□□□□□ -1.07
HMGB1P47-201ENST00000511281 PPP1R1BQ9UD71 204 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms