RNA–Protein interactions for RNA: ENST00000510688.5

NEK11-209, Transcript of NIMA related kinase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK11, Length 2,754 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11-209ENST00000510688 UBR1Q8IWV7 1749 aa15.42■□□□□ 0.06
NEK11-209ENST00000510688 HMGN5P82970 282 aaKnown RBP15.42■□□□□ 0.06
NEK11-209ENST00000510688 PLEKHO1Q53GL0 409 aaPredicted RBP15.42■□□□□ 0.06
NEK11-209ENST00000510688 AKAP4Q5JQC9 854 aa15.42■□□□□ 0.06
NEK11-209ENST00000510688 CHST3Q7LGC8 479 aa15.42■□□□□ 0.06
NEK11-209ENST00000510688 TM6SF1Q9BZW5 370 aa15.42■□□□□ 0.06
NEK11-209ENST00000510688 USP42Q9H9J4 1324 aaKnown RBP15.42■□□□□ 0.06
NEK11-209ENST00000510688 A0A0G2JLW4 131 aa15.42■□□□□ 0.06
NEK11-209ENST00000510688 U2AF2P26368 475 aaKnown RBP eCLIP15.42■□□□□ 0.06
NEK11-209ENST00000510688 PXDNQ92626 1479 aa15.42■□□□□ 0.06
NEK11-209ENST00000510688 H3BQV1 296 aa15.41■□□□□ 0.06
NEK11-209ENST00000510688 PSMA5P28066 241 aa15.41■□□□□ 0.06
NEK11-209ENST00000510688 MTX1Q13505 466 aa15.41■□□□□ 0.06
NEK11-209ENST00000510688 IFFO2Q5TF58 517 aa15.41■□□□□ 0.06
NEK11-209ENST00000510688 ERC1Q8IUD2 1116 aa15.41■□□□□ 0.06
NEK11-209ENST00000510688 BABAM1Q9NWV8 329 aa15.41■□□□□ 0.06
NEK11-209ENST00000510688 PRDM4Q9UKN5 801 aa15.41■□□□□ 0.06
NEK11-209ENST00000510688 AXIN2Q9Y2T1 843 aa15.41■□□□□ 0.06
NEK11-209ENST00000510688 ZNF165P49910 485 aa15.41■□□□□ 0.06
NEK11-209ENST00000510688 ZC3H6P61129 1189 aaKnown RBP15.41■□□□□ 0.06
NEK11-209ENST00000510688 CCT2P78371 535 aaKnown RBP15.41■□□□□ 0.06
NEK11-209ENST00000510688 CHAF1AQ13111 956 aaPredicted RBP15.41■□□□□ 0.06
NEK11-209ENST00000510688 LINS1Q8NG48 757 aa15.41■□□□□ 0.06
NEK11-209ENST00000510688 XAGE3Q8WTP9 111 aa15.41■□□□□ 0.06
NEK11-209ENST00000510688 ORAI2Q96SN7 254 aa15.41■□□□□ 0.06
NEK11-209ENST00000510688 RNF20Q5VTR2 975 aa15.41■□□□□ 0.06
NEK11-209ENST00000510688 Q6ZUG5 572 aa15.41■□□□□ 0.06
NEK11-209ENST00000510688 COPS6Q7L5N1 327 aa15.41■□□□□ 0.06
NEK11-209ENST00000510688 COL15A1P39059 1388 aa15.4■□□□□ 0.06
NEK11-209ENST00000510688 TFCP2Q12800 502 aa15.4■□□□□ 0.06
NEK11-209ENST00000510688 NCOA5Q9HCD5 579 aaKnown RBP15.4■□□□□ 0.06
NEK11-209ENST00000510688 DBNLQ9UJU6 430 aaKnown RBP15.4■□□□□ 0.06
NEK11-209ENST00000510688 TAF5LO75529 589 aa15.4■□□□□ 0.06
NEK11-209ENST00000510688 ALDH1L1O75891 902 aa15.4■□□□□ 0.06
NEK11-209ENST00000510688 CCDC144BQ3MJ40 725 aa15.4■□□□□ 0.06
NEK11-209ENST00000510688 UBE3BQ7Z3V4 1068 aa15.4■□□□□ 0.06
NEK11-209ENST00000510688 CCDC144CPQ8IYA2 1237 aa15.4■□□□□ 0.06
NEK11-209ENST00000510688 ANKRD24Q8TF21 1146 aa15.4■□□□□ 0.06
NEK11-209ENST00000510688 GOLGA6L6A8MZA4 724 aa15.39■□□□□ 0.05
NEK11-209ENST00000510688 PDCL2Q8N4E4 241 aa15.39■□□□□ 0.05
NEK11-209ENST00000510688 DBNDD2Q9BQY9 259 aa15.39■□□□□ 0.05
NEK11-209ENST00000510688 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.39■□□□□ 0.05
NEK11-209ENST00000510688 USP16Q9Y5T5 823 aa15.39■□□□□ 0.05
NEK11-209ENST00000510688 V9GYY5 206 aaPredicted RBP15.39■□□□□ 0.05
NEK11-209ENST00000510688 LRRC37A3O60309 1634 aa15.39■□□□□ 0.05
NEK11-209ENST00000510688 PDCP20941 246 aa15.39■□□□□ 0.05
NEK11-209ENST00000510688 RAB11FIP4Q86YS3 637 aa15.39■□□□□ 0.05
NEK11-209ENST00000510688 NPHP4O75161 1426 aaPredicted RBP15.38■□□□□ 0.05
NEK11-209ENST00000510688 MTERF4Q7Z6M4 381 aaKnown RBP15.38■□□□□ 0.05
NEK11-209ENST00000510688 GCP02774 474 aa15.38■□□□□ 0.05
NEK11-209ENST00000510688 HOXB7P09629 217 aa15.38■□□□□ 0.05
NEK11-209ENST00000510688 C11orf57Q6ZUT1 292 aaPredicted RBP15.38■□□□□ 0.05
NEK11-209ENST00000510688 FILIP1Q7Z7B0 1213 aa15.38■□□□□ 0.05
NEK11-209ENST00000510688 THEMISQ8N1K5 641 aaPredicted RBP15.38■□□□□ 0.05
NEK11-209ENST00000510688 NFATC2IPQ8NCF5 419 aa15.38■□□□□ 0.05
NEK11-209ENST00000510688 CACTINQ8WUQ7 758 aaKnown RBP15.38■□□□□ 0.05
NEK11-209ENST00000510688 KCNB2Q92953 911 aa15.38■□□□□ 0.05
NEK11-209ENST00000510688 SCAND2PQ9GZW5 306 aaPredicted RBP15.38■□□□□ 0.05
NEK11-209ENST00000510688 CLIP2Q9UDT6 1046 aa15.38■□□□□ 0.05
NEK11-209ENST00000510688 CYP21A2P08686 494 aa15.37■□□□□ 0.05
NEK11-209ENST00000510688 PDIA6Q15084 440 aa15.37■□□□□ 0.05
NEK11-209ENST00000510688 SYTL4Q96C24 671 aaPredicted RBP15.37■□□□□ 0.05
NEK11-209ENST00000510688 NEUROD6Q96NK8 337 aa15.37■□□□□ 0.05
NEK11-209ENST00000510688 NEK1Q96PY6 1258 aa15.37■□□□□ 0.05
NEK11-209ENST00000510688 ZNF75DP51815 510 aa15.37■□□□□ 0.05
NEK11-209ENST00000510688 NPHP3Q7Z494 1330 aa15.37■□□□□ 0.05
NEK11-209ENST00000510688 DDX58O95786 925 aaKnown RBP15.36■□□□□ 0.05
NEK11-209ENST00000510688 APOBRQ0VD83 1088 aa15.36■□□□□ 0.05
NEK11-209ENST00000510688 ZSCAN25Q6NSZ9 544 aa15.36■□□□□ 0.05
NEK11-209ENST00000510688 TRMT1Q9NXH9 659 aaKnown RBP15.36■□□□□ 0.05
NEK11-209ENST00000510688 USP27XA6NNY8 438 aa15.36■□□□□ 0.05
NEK11-209ENST00000510688 NEURL1BA8MQ27 555 aa15.36■□□□□ 0.05
NEK11-209ENST00000510688 TNNT1P13805 278 aa15.36■□□□□ 0.05
NEK11-209ENST00000510688 NEXNQ0ZGT2 675 aa15.36■□□□□ 0.05
NEK11-209ENST00000510688 SCRN1Q12765 414 aa15.36■□□□□ 0.05
NEK11-209ENST00000510688 OTUD7BQ6GQQ9 843 aa15.36■□□□□ 0.05
NEK11-209ENST00000510688 STOX1Q6ZVD7 989 aa15.36■□□□□ 0.05
NEK11-209ENST00000510688 CLSTN2Q9H4D0 955 aa15.36■□□□□ 0.05
NEK11-209ENST00000510688 NPHP1O15259 732 aa15.36■□□□□ 0.05
NEK11-209ENST00000510688 TPD52L1Q16890 204 aaPredicted RBP15.36■□□□□ 0.05
NEK11-209ENST00000510688 DDX21Q9NR30 783 aaKnown RBP eCLIP15.36■□□□□ 0.05
NEK11-209ENST00000510688 GTF2F1P35269 517 aaKnown RBP eCLIP15.35■□□□□ 0.05
NEK11-209ENST00000510688 GCKRQ14397 625 aa15.35■□□□□ 0.05
NEK11-209ENST00000510688 ANKRD1Q15327 319 aa15.35■□□□□ 0.05
NEK11-209ENST00000510688 GTF3C6Q969F1 213 aa15.35■□□□□ 0.05
NEK11-209ENST00000510688 GPHNQ9NQX3 736 aaPredicted RBP15.35■□□□□ 0.05
NEK11-209ENST00000510688 NLRP2Q9NX02 1062 aa15.35■□□□□ 0.05
NEK11-209ENST00000510688 HIP1O00291 1037 aa15.35■□□□□ 0.05
NEK11-209ENST00000510688 ZNF496Q96IT1 587 aaPredicted RBP15.35■□□□□ 0.05
NEK11-209ENST00000510688 MED23Q9ULK4 1368 aa15.34■□□□□ 0.05
NEK11-209ENST00000510688 GOLIM4O00461 696 aa15.34■□□□□ 0.05
NEK11-209ENST00000510688 ZSCAN20P17040 1043 aaPredicted RBP15.34■□□□□ 0.05
NEK11-209ENST00000510688 RESTQ13127 1097 aa15.34■□□□□ 0.05
NEK11-209ENST00000510688 GOLPH3LQ9H4A5 285 aa15.34■□□□□ 0.05
NEK11-209ENST00000510688 TIMM10P62072 90 aa15.34■□□□□ 0.05
NEK11-209ENST00000510688 HSP90AB3PQ58FF7 597 aa15.34■□□□□ 0.05
NEK11-209ENST00000510688 TNNI3KQ59H18 835 aa15.34■□□□□ 0.05
NEK11-209ENST00000510688 DDX19AQ9NUU7 478 aaKnown RBP15.34■□□□□ 0.05
NEK11-209ENST00000510688 FPGT-TNNI3KV9GXZ4 949 aa15.34■□□□□ 0.05
NEK11-209ENST00000510688 ELP1O95163 1332 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms