RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 MEIOBQ8N635 442 aa5.86□□□□□ -1.47
HMGB1P21-201ENST00000502313 MORC4Q8TE76 937 aa5.86□□□□□ -1.47
HMGB1P21-201ENST00000502313 METTL5Q9NRN9 209 aaKnown RBP5.86□□□□□ -1.47
HMGB1P21-201ENST00000502313 IFT57Q9NWB7 429 aa5.86□□□□□ -1.47
HMGB1P21-201ENST00000502313 PKD2L1Q9P0L9 805 aa5.86□□□□□ -1.47
HMGB1P21-201ENST00000502313 ANKIB1Q9P2G1 1089 aa5.86□□□□□ -1.47
HMGB1P21-201ENST00000502313 VTI1BQ9UEU0 232 aa5.86□□□□□ -1.47
HMGB1P21-201ENST00000502313 POLIQ9UNA4 740 aa5.86□□□□□ -1.47
HMGB1P21-201ENST00000502313 FAN1Q9Y2M0 1017 aa5.86□□□□□ -1.47
HMGB1P21-201ENST00000502313 COL4A3BPQ9Y5P4 624 aa5.86□□□□□ -1.47
HMGB1P21-201ENST00000502313 TOP2BQ02880 1626 aa5.85□□□□□ -1.47
HMGB1P21-201ENST00000502313 BIVM-ERCC5R4GMW8 1640 aa5.85□□□□□ -1.47
HMGB1P21-201ENST00000502313 SYNJ1O43426 1573 aa5.85□□□□□ -1.47
HMGB1P21-201ENST00000502313 SOGA1O94964 1423 aa5.85□□□□□ -1.47
HMGB1P21-201ENST00000502313 SORBS3O60504 671 aa5.85□□□□□ -1.47
HMGB1P21-201ENST00000502313 BMP2P12643 396 aa5.85□□□□□ -1.47
HMGB1P21-201ENST00000502313 ARID5AQ03989 594 aa5.85□□□□□ -1.47
HMGB1P21-201ENST00000502313 FMR1Q06787 632 aaKnown RBP eCLIP5.85□□□□□ -1.47
HMGB1P21-201ENST00000502313 SH3PXD2AQ5TCZ1 1133 aa5.85□□□□□ -1.47
HMGB1P21-201ENST00000502313 ALG1LQ6GMV1 187 aa5.85□□□□□ -1.47
HMGB1P21-201ENST00000502313 FILIP1Q7Z7B0 1213 aa5.85□□□□□ -1.47
HMGB1P21-201ENST00000502313 TREML1Q86YW5 311 aa5.85□□□□□ -1.47
HMGB1P21-201ENST00000502313 LINC00528Q8N1L1 170 aa5.85□□□□□ -1.47
HMGB1P21-201ENST00000502313 ZDHHC1Q8WTX9 485 aa5.85□□□□□ -1.47
HMGB1P21-201ENST00000502313 INSM2Q96T92 566 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P21-201ENST00000502313 NIF3L1Q9GZT8 377 aa5.85□□□□□ -1.47
HMGB1P21-201ENST00000502313 GABBR1Q9UBS5 961 aa5.85□□□□□ -1.47
HMGB1P21-201ENST00000502313 WWC3Q9ULE0 1092 aa5.85□□□□□ -1.47
HMGB1P21-201ENST00000502313 LRFN2Q9ULH4 789 aa5.85□□□□□ -1.47
HMGB1P21-201ENST00000502313 G3BP2Q9UN86 482 aaKnown RBP5.85□□□□□ -1.47
HMGB1P21-201ENST00000502313 FNDC3AQ9Y2H6 1198 aaKnown RBP5.85□□□□□ -1.47
HMGB1P21-201ENST00000502313 HRH3Q9Y5N1 445 aa5.85□□□□□ -1.47
HMGB1P21-201ENST00000502313 PNMA6FA0A0J9YX94 578 aa5.84□□□□□ -1.47
HMGB1P21-201ENST00000502313 CCDC194A0A1B0GVG4 234 aa5.84□□□□□ -1.47
HMGB1P21-201ENST00000502313 CAPN5O15484 640 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P21-201ENST00000502313 PDGFAP04085 211 aa5.84□□□□□ -1.47
HMGB1P21-201ENST00000502313 EPB42P16452 691 aa5.84□□□□□ -1.47
HMGB1P21-201ENST00000502313 HSD3B2P26439 372 aa5.84□□□□□ -1.47
HMGB1P21-201ENST00000502313 PHKA2P46019 1235 aa5.84□□□□□ -1.47
HMGB1P21-201ENST00000502313 SCARF1Q14162 830 aa5.84□□□□□ -1.47
HMGB1P21-201ENST00000502313 PLEKHG6Q3KR16 790 aa5.84□□□□□ -1.47
HMGB1P21-201ENST00000502313 ARSJQ5FYB0 599 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P21-201ENST00000502313 RNF187Q5TA31 235 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P21-201ENST00000502313 SOGA3Q5TF21 947 aa5.84□□□□□ -1.47
HMGB1P21-201ENST00000502313 TMC4Q7Z404 712 aa5.84□□□□□ -1.47
HMGB1P21-201ENST00000502313 ZCRB1Q8TBF4 217 aaKnown RBP5.84□□□□□ -1.47
HMGB1P21-201ENST00000502313 GPR152Q8TDT2 470 aa5.84□□□□□ -1.47
HMGB1P21-201ENST00000502313 PMM1Q92871 262 aa5.84□□□□□ -1.47
HMGB1P21-201ENST00000502313 SETDB2Q96T68 719 aa5.84□□□□□ -1.47
HMGB1P21-201ENST00000502313 BRINP2Q9C0B6 783 aa5.84□□□□□ -1.47
HMGB1P21-201ENST00000502313 PCDH12Q9NPG4 1184 aa5.84□□□□□ -1.47
HMGB1P21-201ENST00000502313 ZDHHC3Q9NYG2 299 aa5.84□□□□□ -1.47
HMGB1P21-201ENST00000502313 INPP5FQ9Y2H2 1132 aa5.84□□□□□ -1.47
HMGB1P21-201ENST00000502313 GPC6Q9Y625 555 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P21-201ENST00000502313 ABCA5Q8WWZ7 1642 aa5.84□□□□□ -1.47
HMGB1P21-201ENST00000502313 WRNQ14191 1432 aaPredicted RBP eCLIP5.83□□□□□ -1.48
HMGB1P21-201ENST00000502313 TDRD9Q8NDG6 1382 aaKnown RBP5.83□□□□□ -1.48
HMGB1P21-201ENST00000502313 TGFBR3LH3BV60 316 aa5.83□□□□□ -1.48
HMGB1P21-201ENST00000502313 GPR182O15218 404 aa5.83□□□□□ -1.48
HMGB1P21-201ENST00000502313 RNF144AP50876 292 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P21-201ENST00000502313 DAB2P98082 770 aa5.83□□□□□ -1.48
HMGB1P21-201ENST00000502313 C4orf17Q53FE4 359 aa5.83□□□□□ -1.48
HMGB1P21-201ENST00000502313 HSP90AB2PQ58FF8 381 aa5.83□□□□□ -1.48
HMGB1P21-201ENST00000502313 C6orf118Q5T5N4 469 aa5.83□□□□□ -1.48
HMGB1P21-201ENST00000502313 ETFBKMTQ8IXQ9 262 aa5.83□□□□□ -1.48
HMGB1P21-201ENST00000502313 RPUSD2Q8IZ73 545 aaKnown RBP5.83□□□□□ -1.48
HMGB1P21-201ENST00000502313 ALKBH8Q96BT7 664 aaKnown RBP5.83□□□□□ -1.48
HMGB1P21-201ENST00000502313 NUDT16Q96DE0 195 aaKnown RBP5.83□□□□□ -1.48
HMGB1P21-201ENST00000502313 FAM129BQ96TA1 746 aa5.83□□□□□ -1.48
HMGB1P21-201ENST00000502313 ZBTB39O15060 712 aa5.82□□□□□ -1.48
HMGB1P21-201ENST00000502313 STK10O94804 968 aaKnown RBP5.82□□□□□ -1.48
HMGB1P21-201ENST00000502313 SMPD1P17405 629 aa5.82□□□□□ -1.48
HMGB1P21-201ENST00000502313 TXLNAP40222 546 aa5.82□□□□□ -1.48
HMGB1P21-201ENST00000502313 RACK1P63244 317 aaKnown RBP5.82□□□□□ -1.48
HMGB1P21-201ENST00000502313 ZNF394Q53GI3 561 aa5.82□□□□□ -1.48
HMGB1P21-201ENST00000502313 POTEAQ6S8J7 498 aa5.82□□□□□ -1.48
HMGB1P21-201ENST00000502313 MCF2L2Q86YR7 1114 aa5.82□□□□□ -1.48
HMGB1P21-201ENST00000502313 GJD3Q8N144 294 aa5.82□□□□□ -1.48
HMGB1P21-201ENST00000502313 KDF1Q8NAX2 398 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P21-201ENST00000502313 FBF1Q8TES7 1133 aa5.82□□□□□ -1.48
HMGB1P21-201ENST00000502313 KLF16Q9BXK1 252 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P21-201ENST00000502313 MAGEC2Q9UBF1 373 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P21-201ENST00000502313 SPG7Q9UQ90 795 aa5.82□□□□□ -1.48
HMGB1P21-201ENST00000502313 PCDHGB7Q9Y5F8 929 aa5.82□□□□□ -1.48
HMGB1P21-201ENST00000502313 SPINT1O43278 529 aa5.81□□□□□ -1.48
HMGB1P21-201ENST00000502313 RGS20O76081 388 aa5.81□□□□□ -1.48
HMGB1P21-201ENST00000502313 MICAL2O94851 1124 aa5.81□□□□□ -1.48
HMGB1P21-201ENST00000502313 ARSDP51689 593 aa5.81□□□□□ -1.48
HMGB1P21-201ENST00000502313 DSC3Q14574 896 aa5.81□□□□□ -1.48
HMGB1P21-201ENST00000502313 LYSMD3Q7Z3D4 306 aa5.81□□□□□ -1.48
HMGB1P21-201ENST00000502313 PRICKLE2Q7Z3G6 844 aa5.81□□□□□ -1.48
HMGB1P21-201ENST00000502313 APBB1IPQ7Z5R6 666 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P21-201ENST00000502313 PGBD3Q8N328 593 aa5.81□□□□□ -1.48
HMGB1P21-201ENST00000502313 STAG1Q8WVM7 1258 aa5.81□□□□□ -1.48
HMGB1P21-201ENST00000502313 EVI5LQ96CN4 794 aa5.81□□□□□ -1.48
HMGB1P21-201ENST00000502313 GRIP2Q9C0E4 1043 aa5.81□□□□□ -1.48
HMGB1P21-201ENST00000502313 IRF2BPLQ9H1B7 796 aa5.81□□□□□ -1.48
HMGB1P21-201ENST00000502313 TOR4AQ9NXH8 423 aa5.81□□□□□ -1.48
HMGB1P21-201ENST00000502313 MAGI1Q96QZ7 1491 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P21-201ENST00000502313 CLASP1Q7Z460 1538 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms