RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 ERVH48-1M5A8F1 160 aa11.33□□□□□ -0.6
VPS45-210ENST00000497638 PMFBP1Q8TBY8 1022 aa11.33□□□□□ -0.6
VPS45-210ENST00000497638 INSM2Q96T92 566 aaPredicted RBP11.33□□□□□ -0.6
VPS45-210ENST00000497638 DHX57Q6P158 1386 aaKnown RBP11.32□□□□□ -0.6
VPS45-210ENST00000497638 DLC1Q96QB1 1528 aa11.32□□□□□ -0.6
VPS45-210ENST00000497638 CTSOP43234 321 aaPredicted RBP11.32□□□□□ -0.6
VPS45-210ENST00000497638 RGL3Q3MIN7 710 aa11.32□□□□□ -0.6
VPS45-210ENST00000497638 ACIN1Q9UKV3 1341 aaKnown RBP11.32□□□□□ -0.6
VPS45-210ENST00000497638 CAMTA1Q9Y6Y1 1673 aa11.31□□□□□ -0.6
VPS45-210ENST00000497638 PDE3BQ13370 1112 aa11.31□□□□□ -0.6
VPS45-210ENST00000497638 CCDC155Q8N6L0 562 aa11.31□□□□□ -0.6
VPS45-210ENST00000497638 PRAM1Q96QH2 718 aa11.31□□□□□ -0.6
VPS45-210ENST00000497638 TRIM34Q9BYJ4 488 aa11.31□□□□□ -0.6
VPS45-210ENST00000497638 C14orf93Q9H972 538 aaKnown RBP11.31□□□□□ -0.6
VPS45-210ENST00000497638 SENP3-EIF4A1A0A087X0R7 540 aa11.3□□□□□ -0.6
VPS45-210ENST00000497638 RGPD3A6NKT7 1758 aaPredicted RBP11.3□□□□□ -0.6
VPS45-210ENST00000497638 RGPD4Q7Z3J3 1758 aa11.3□□□□□ -0.6
VPS45-210ENST00000497638 KIAA0232Q92628 1395 aa11.29□□□□□ -0.6
VPS45-210ENST00000497638 ADH1AP07327 375 aa11.29□□□□□ -0.6
VPS45-210ENST00000497638 SAFB2Q14151 953 aaKnown RBP eCLIP11.29□□□□□ -0.6
VPS45-210ENST00000497638 STRN4Q9NRL3 753 aa11.29□□□□□ -0.6
VPS45-210ENST00000497638 TULP4Q9NRJ4 1543 aa11.29□□□□□ -0.6
VPS45-210ENST00000497638 NRKQ7Z2Y5 1582 aa11.28□□□□□ -0.6
VPS45-210ENST00000497638 SSH2Q76I76 1423 aa11.28□□□□□ -0.6
VPS45-210ENST00000497638 ADD1P35611 737 aaKnown RBP11.28□□□□□ -0.6
VPS45-210ENST00000497638 GPR161Q8N6U8 529 aaKnown RBP11.28□□□□□ -0.6
VPS45-210ENST00000497638 POGKQ9P215 609 aa11.28□□□□□ -0.6
VPS45-210ENST00000497638 PCDHB9Q9Y5E1 797 aa11.28□□□□□ -0.6
VPS45-210ENST00000497638 CASZ1Q86V15 1759 aa11.28□□□□□ -0.6
VPS45-210ENST00000497638 PHRF1Q9P1Y6 1649 aaKnown RBP11.27□□□□□ -0.6
VPS45-210ENST00000497638 ATP7BP35670 1465 aa11.27□□□□□ -0.6
VPS45-210ENST00000497638 SLC35F4A4IF30 521 aa11.27□□□□□ -0.61
VPS45-210ENST00000497638 ZBBXA8MT70 800 aa11.27□□□□□ -0.61
VPS45-210ENST00000497638 ESPNB1AK53 854 aa11.27□□□□□ -0.61
VPS45-210ENST00000497638 CNTNAP3BQ96NU0 1288 aa11.27□□□□□ -0.61
VPS45-210ENST00000497638 CNTNAP3Q9BZ76 1288 aa11.27□□□□□ -0.61
VPS45-210ENST00000497638 UTRNP46939 3433 aa11.27□□□□□ -0.61
VPS45-210ENST00000497638 CHD4Q14839 1912 aa11.27□□□□□ -0.61
VPS45-210ENST00000497638 LILRA1O75019 489 aa11.26□□□□□ -0.61
VPS45-210ENST00000497638 PTGIRP43119 386 aa11.26□□□□□ -0.61
VPS45-210ENST00000497638 C1QTNF8P60827 252 aa11.26□□□□□ -0.61
VPS45-210ENST00000497638 CHRNA2Q15822 529 aa11.26□□□□□ -0.61
VPS45-210ENST00000497638 TCP11L2Q8N4U5 519 aa11.26□□□□□ -0.61
VPS45-210ENST00000497638 NGDNQ8NEJ9 315 aaKnown RBP11.26□□□□□ -0.61
VPS45-210ENST00000497638 CYLDQ9NQC7 956 aa11.26□□□□□ -0.61
VPS45-210ENST00000497638 USP35Q9P2H5 1018 aa11.26□□□□□ -0.61
VPS45-210ENST00000497638 PRR36Q9H6K5 1346 aa11.26□□□□□ -0.61
VPS45-210ENST00000497638 CDC14CA4D256 554 aa11.25□□□□□ -0.61
VPS45-210ENST00000497638 CFAP70Q5T0N1 1121 aa11.25□□□□□ -0.61
VPS45-210ENST00000497638 RNF217Q8TC41 542 aa11.25□□□□□ -0.61
VPS45-210ENST00000497638 THRAP3Q9Y2W1 955 aaKnown RBP11.25□□□□□ -0.61
VPS45-210ENST00000497638 PARP4Q9UKK3 1724 aaKnown RBP11.25□□□□□ -0.61
VPS45-210ENST00000497638 OVOS2A0A0G2JMS6 1433 aa11.25□□□□□ -0.61
VPS45-210ENST00000497638 OVOS2A0A0J9YW53 1432 aa11.25□□□□□ -0.61
VPS45-210ENST00000497638 OVOS2Q6IE36 1432 aa11.25□□□□□ -0.61
VPS45-210ENST00000497638 MYOM1P52179 1685 aa11.24□□□□□ -0.61
VPS45-210ENST00000497638 ITSN1Q15811 1721 aa11.24□□□□□ -0.61
VPS45-210ENST00000497638 PLSCR1O15162 318 aa11.24□□□□□ -0.61
VPS45-210ENST00000497638 GIGYF1O75420 1035 aaPredicted RBP11.24□□□□□ -0.61
VPS45-210ENST00000497638 ITGA6P23229 1130 aa11.24□□□□□ -0.61
VPS45-210ENST00000497638 EVA1CP58658 441 aa11.24□□□□□ -0.61
VPS45-210ENST00000497638 NANOS1Q8WY41 292 aaKnown RBP11.24□□□□□ -0.61
VPS45-210ENST00000497638 WASLO00401 505 aaPredicted RBP11.23□□□□□ -0.61
VPS45-210ENST00000497638 FBXO45P0C2W1 286 aa11.23□□□□□ -0.61
VPS45-210ENST00000497638 ZC3H6P61129 1189 aaKnown RBP11.23□□□□□ -0.61
VPS45-210ENST00000497638 VWA5B2Q8N398 1253 aa11.23□□□□□ -0.61
VPS45-210ENST00000497638 HIRIP3Q9BW71 556 aaPredicted RBP11.23□□□□□ -0.61
VPS45-210ENST00000497638 COL25A1Q9BXS0 654 aaPredicted RBP11.23□□□□□ -0.61
VPS45-210ENST00000497638 ADGRB1O14514 1584 aa11.23□□□□□ -0.61
VPS45-210ENST00000497638 PEAK1Q9H792 1746 aa11.23□□□□□ -0.61
VPS45-210ENST00000497638 CPDO75976 1380 aa11.22□□□□□ -0.61
VPS45-210ENST00000497638 KRT76Q01546 638 aa11.22□□□□□ -0.61
VPS45-210ENST00000497638 LARP1Q6PKG0 1096 aaKnown RBP11.22□□□□□ -0.61
VPS45-210ENST00000497638 SV2AQ7L0J3 742 aa11.22□□□□□ -0.61
VPS45-210ENST00000497638 LMO7Q8WWI1 1683 aa11.22□□□□□ -0.61
VPS45-210ENST00000497638 BRPF1P55201 1214 aaPredicted RBP11.21□□□□□ -0.61
VPS45-210ENST00000497638 FOXD4L5Q5VV16 416 aaPredicted RBP11.21□□□□□ -0.61
VPS45-210ENST00000497638 LYSMD3Q7Z3D4 306 aa11.21□□□□□ -0.61
VPS45-210ENST00000497638 SBF2Q86WG5 1849 aa11.21□□□□□ -0.62
VPS45-210ENST00000497638 ZBTB7AO95365 584 aa11.2□□□□□ -0.62
VPS45-210ENST00000497638 KDF1Q8NAX2 398 aaPredicted RBP11.2□□□□□ -0.62
VPS45-210ENST00000497638 SYT17Q9BSW7 474 aa11.2□□□□□ -0.62
VPS45-210ENST00000497638 CEP350Q5VT06 3117 aa11.2□□□□□ -0.62
VPS45-210ENST00000497638 ATP5J2-PTCD1G3V325 749 aa11.19□□□□□ -0.62
VPS45-210ENST00000497638 RNF20Q5VTR2 975 aa11.19□□□□□ -0.62
VPS45-210ENST00000497638 PPARGC1BQ86YN6 1023 aaKnown RBP11.19□□□□□ -0.62
VPS45-210ENST00000497638 MPHOSPH9Q99550 1183 aa11.19□□□□□ -0.62
VPS45-210ENST00000497638 FHDC1Q9C0D6 1143 aaPredicted RBP11.19□□□□□ -0.62
VPS45-210ENST00000497638 TRAK1Q9UPV9 953 aa11.19□□□□□ -0.62
VPS45-210ENST00000497638 COL5A2P05997 1499 aaPredicted RBP11.19□□□□□ -0.62
VPS45-210ENST00000497638 CRB1P82279 1406 aa11.18□□□□□ -0.62
VPS45-210ENST00000497638 POLR3AO14802 1390 aaPredicted RBP11.18□□□□□ -0.62
VPS45-210ENST00000497638 MAP3K5Q99683 1374 aa11.18□□□□□ -0.62
VPS45-210ENST00000497638 USP19O94966 1318 aa11.18□□□□□ -0.62
VPS45-210ENST00000497638 LRRC37A3O60309 1634 aa11.18□□□□□ -0.62
VPS45-210ENST00000497638 PRICKLE2Q7Z3G6 844 aa11.18□□□□□ -0.62
VPS45-210ENST00000497638 PDGFDQ9GZP0 370 aaPredicted RBP11.18□□□□□ -0.62
VPS45-210ENST00000497638 ZNF330Q9Y3S2 320 aaPredicted RBP11.18□□□□□ -0.62
VPS45-210ENST00000497638 BCL9O00512 1426 aa11.18□□□□□ -0.62
VPS45-210ENST00000497638 MEN1O00255 615 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms