RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 RGL4Q8IZJ4 473 aa4.13□□□□□ -1.75
CDC42EP3-205ENST00000494083 NUDT8Q8WV74 236 aa4.13□□□□□ -1.75
CDC42EP3-205ENST00000494083 KCNH4Q9UQ05 1017 aa4.13□□□□□ -1.75
CDC42EP3-205ENST00000494083 CC2D2AQ9P2K1 1620 aa4.13□□□□□ -1.75
CDC42EP3-205ENST00000494083 ACIN1Q9UKV3 1341 aaKnown RBP4.13□□□□□ -1.75
CDC42EP3-205ENST00000494083 SIN3BO75182 1162 aa4.13□□□□□ -1.75
CDC42EP3-205ENST00000494083 INPP5BP32019 993 aa4.13□□□□□ -1.75
CDC42EP3-205ENST00000494083 KCNQ4P56696 695 aa4.13□□□□□ -1.75
CDC42EP3-205ENST00000494083 PLAURQ03405 335 aa4.13□□□□□ -1.75
CDC42EP3-205ENST00000494083 ADCY10Q96PN6 1610 aa4.13□□□□□ -1.75
CDC42EP3-205ENST00000494083 GNB5O14775 395 aa4.12□□□□□ -1.75
CDC42EP3-205ENST00000494083 MLLT1Q03111 559 aaPredicted RBP4.12□□□□□ -1.75
CDC42EP3-205ENST00000494083 LAMC2Q13753 1193 aa4.12□□□□□ -1.75
CDC42EP3-205ENST00000494083 TNFRSF25Q93038 417 aa4.12□□□□□ -1.75
CDC42EP3-205ENST00000494083 GOLGA3Q08378 1498 aa4.12□□□□□ -1.75
CDC42EP3-205ENST00000494083 ARAP1Q96P48 1450 aa4.12□□□□□ -1.75
CDC42EP3-205ENST00000494083 CD163Q86VB7 1156 aa4.12□□□□□ -1.75
CDC42EP3-205ENST00000494083 PLVAPQ9BX97 442 aa4.12□□□□□ -1.75
CDC42EP3-205ENST00000494083 GSX2Q9BZM3 304 aa4.12□□□□□ -1.75
CDC42EP3-205ENST00000494083 AVENQ9NQS1 362 aaPredicted RBP4.12□□□□□ -1.75
CDC42EP3-205ENST00000494083 GPC6Q9Y625 555 aaPredicted RBP4.12□□□□□ -1.75
CDC42EP3-205ENST00000494083 OPLAHO14841 1288 aa4.12□□□□□ -1.75
CDC42EP3-205ENST00000494083 TRIP4Q15650 581 aaPredicted RBP4.12□□□□□ -1.75
CDC42EP3-205ENST00000494083 SEPT3Q9UH03 358 aa4.12□□□□□ -1.75
CDC42EP3-205ENST00000494083 ANKIB1Q9P2G1 1089 aa4.11□□□□□ -1.75
CDC42EP3-205ENST00000494083 ZBTB39O15060 712 aa4.11□□□□□ -1.75
CDC42EP3-205ENST00000494083 FOXO3O43524 673 aa4.11□□□□□ -1.75
CDC42EP3-205ENST00000494083 SASH3O75995 380 aa4.11□□□□□ -1.75
CDC42EP3-205ENST00000494083 MTMR3Q13615 1198 aa4.11□□□□□ -1.75
CDC42EP3-205ENST00000494083 TREML1Q86YW5 311 aa4.11□□□□□ -1.75
CDC42EP3-205ENST00000494083 UBE2OQ9C0C9 1292 aaKnown RBP4.11□□□□□ -1.75
CDC42EP3-205ENST00000494083 TNIKQ9UKE5 1360 aa4.11□□□□□ -1.75
CDC42EP3-205ENST00000494083 C1QTNF9BB2RNN3 333 aa4.11□□□□□ -1.75
CDC42EP3-205ENST00000494083 GRIK4Q16099 956 aa4.11□□□□□ -1.75
CDC42EP3-205ENST00000494083 IER5Q5VY09 327 aa4.11□□□□□ -1.75
CDC42EP3-205ENST00000494083 ADARB2-AS1A8MUL3 147 aa4.1□□□□□ -1.75
CDC42EP3-205ENST00000494083 TNFRSF10BO14763 440 aa4.1□□□□□ -1.75
CDC42EP3-205ENST00000494083 MICAL2O94851 1124 aa4.1□□□□□ -1.75
CDC42EP3-205ENST00000494083 SWI5Q1ZZU3 235 aa4.1□□□□□ -1.75
CDC42EP3-205ENST00000494083 HFE2Q6ZVN8 426 aa4.1□□□□□ -1.75
CDC42EP3-205ENST00000494083 MICALL1Q8N3F8 863 aa4.1□□□□□ -1.75
CDC42EP3-205ENST00000494083 PBXIP1Q96AQ6 731 aa4.1□□□□□ -1.75
CDC42EP3-205ENST00000494083 CCDC97Q96F63 343 aaPredicted RBP4.1□□□□□ -1.75
CDC42EP3-205ENST00000494083 DNAJB12Q9NXW2 375 aaKnown RBP4.1□□□□□ -1.75
CDC42EP3-205ENST00000494083 CUL7Q14999 1698 aa4.1□□□□□ -1.75
CDC42EP3-205ENST00000494083 LAMC1P11047 1609 aa4.1□□□□□ -1.75
CDC42EP3-205ENST00000494083 ZBTB42B2RXF5 422 aa4.1□□□□□ -1.75
CDC42EP3-205ENST00000494083 NID1P14543 1247 aa4.1□□□□□ -1.75
CDC42EP3-205ENST00000494083 C20orf204Q6ZNR8 217 aa4.1□□□□□ -1.75
CDC42EP3-205ENST00000494083 VTI1AQ96AJ9 217 aa4.1□□□□□ -1.75
CDC42EP3-205ENST00000494083 IFT43Q96FT9 208 aa4.1□□□□□ -1.75
CDC42EP3-205ENST00000494083 JPH1Q9HDC5 661 aaPredicted RBP4.1□□□□□ -1.75
CDC42EP3-205ENST00000494083 CXXC1Q9P0U4 656 aaPredicted RBP4.1□□□□□ -1.75
CDC42EP3-205ENST00000494083 RTCBQ9Y3I0 505 aaKnown RBP4.1□□□□□ -1.75
CDC42EP3-205ENST00000494083 ATG7O95352 703 aa4.1□□□□□ -1.75
CDC42EP3-205ENST00000494083 PSAPL1Q6NUJ1 521 aa4.1□□□□□ -1.75
CDC42EP3-205ENST00000494083 ATCAYQ86WG3 371 aa4.1□□□□□ -1.75
CDC42EP3-205ENST00000494083 MYO19Q96H55 970 aa4.1□□□□□ -1.75
CDC42EP3-205ENST00000494083 SLC6A14Q9UN76 642 aa4.1□□□□□ -1.75
CDC42EP3-205ENST00000494083 CPB1P15086 417 aa4.09□□□□□ -1.75
CDC42EP3-205ENST00000494083 SUZ12Q15022 739 aaKnown RBP4.09□□□□□ -1.75
CDC42EP3-205ENST00000494083 NSUN5Q96P11 429 aaKnown RBP4.09□□□□□ -1.75
CDC42EP3-205ENST00000494083 KCNMB2Q9Y691 235 aa4.09□□□□□ -1.75
CDC42EP3-205ENST00000494083 SHROOM2Q13796 1616 aa4.09□□□□□ -1.75
CDC42EP3-205ENST00000494083 MSTNO14793 375 aa4.09□□□□□ -1.75
CDC42EP3-205ENST00000494083 SHISA2Q6UWI4 295 aa4.09□□□□□ -1.75
CDC42EP3-205ENST00000494083 PNMA5Q96PV4 448 aa4.09□□□□□ -1.75
CDC42EP3-205ENST00000494083 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.09□□□□□ -1.75
CDC42EP3-205ENST00000494083 TIAM1Q13009 1591 aa4.09□□□□□ -1.76
CDC42EP3-205ENST00000494083 FURINP09958 794 aa4.09□□□□□ -1.76
CDC42EP3-205ENST00000494083 CCINQ13939 588 aa4.09□□□□□ -1.76
CDC42EP3-205ENST00000494083 FAM35AQ86V20 835 aa4.09□□□□□ -1.76
CDC42EP3-205ENST00000494083 CMTR1Q8N1G2 835 aaKnown RBP4.09□□□□□ -1.76
CDC42EP3-205ENST00000494083 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.09□□□□□ -1.76
CDC42EP3-205ENST00000494083 ARSDP51689 593 aa4.08□□□□□ -1.76
CDC42EP3-205ENST00000494083 ELOAQ14241 798 aaKnown RBP4.08□□□□□ -1.76
CDC42EP3-205ENST00000494083 XYLBO75191 536 aa4.08□□□□□ -1.76
CDC42EP3-205ENST00000494083 RARAP10276 462 aa4.08□□□□□ -1.76
CDC42EP3-205ENST00000494083 ALAS2P22557 587 aa4.08□□□□□ -1.76
CDC42EP3-205ENST00000494083 C11orf91Q3C1V1 193 aa4.08□□□□□ -1.76
CDC42EP3-205ENST00000494083 C16orf46Q6P387 395 aa4.08□□□□□ -1.76
CDC42EP3-205ENST00000494083 CEP152O94986 1710 aa4.08□□□□□ -1.76
CDC42EP3-205ENST00000494083 AQRO60306 1485 aaKnown RBP eCLIP4.08□□□□□ -1.76
CDC42EP3-205ENST00000494083 AFF1P51825 1210 aaKnown RBP4.08□□□□□ -1.76
CDC42EP3-205ENST00000494083 DHX32Q7L7V1 743 aaKnown RBP4.08□□□□□ -1.76
CDC42EP3-205ENST00000494083 LPIN3Q9BQK8 851 aa4.08□□□□□ -1.76
CDC42EP3-205ENST00000494083 J3QW42 95 aa4.07□□□□□ -1.76
CDC42EP3-205ENST00000494083 ITGB7P26010 798 aa4.07□□□□□ -1.76
CDC42EP3-205ENST00000494083 PERM1Q5SV97 790 aa4.07□□□□□ -1.76
CDC42EP3-205ENST00000494083 ADAMTSL4Q6UY14 1074 aa4.07□□□□□ -1.76
CDC42EP3-205ENST00000494083 ADGBQ8N7X0 1667 aa4.07□□□□□ -1.76
CDC42EP3-205ENST00000494083 TMEM88BA6NKF7 163 aa4.07□□□□□ -1.76
CDC42EP3-205ENST00000494083 MMP20O60882 483 aa4.07□□□□□ -1.76
CDC42EP3-205ENST00000494083 LILRB5O75023 590 aa4.07□□□□□ -1.76
CDC42EP3-205ENST00000494083 ATP2B4P23634 1241 aa4.07□□□□□ -1.76
CDC42EP3-205ENST00000494083 TRIM26Q12899 539 aaPredicted RBP4.07□□□□□ -1.76
CDC42EP3-205ENST00000494083 NEUROD1Q13562 356 aa4.07□□□□□ -1.76
CDC42EP3-205ENST00000494083 DENND4BO75064 1496 aaPredicted RBP4.07□□□□□ -1.76
CDC42EP3-205ENST00000494083 LOC100996750A0A140TA64 210 aa4.07□□□□□ -1.76
CDC42EP3-205ENST00000494083 A6NHS1 94 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms