RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 AEBP2Q6ZN18 517 aaPredicted RBP13.05□□□□□ -0.32
CDC42EP3-205ENST00000494083 CHIC1Q5VXU3 224 aa12.45□□□□□ -0.42
CDC42EP3-205ENST00000494083 PHF23Q9BUL5 403 aaPredicted RBP11.03□□□□□ -0.64
CDC42EP3-205ENST00000494083 SENP3Q9H4L4 574 aaPredicted RBP10.94□□□□□ -0.66
CDC42EP3-205ENST00000494083 FOXD1Q16676 465 aa10.28□□□□□ -0.76
CDC42EP3-205ENST00000494083 PLPPR3Q6T4P5 718 aa9.99□□□□□ -0.81
CDC42EP3-205ENST00000494083 PPP6R1Q9UPN7 881 aa9.83□□□□□ -0.84
CDC42EP3-205ENST00000494083 ADRA2BP18089 450 aa9.78□□□□□ -0.84
CDC42EP3-205ENST00000494083 PIAS4Q8N2W9 510 aaPredicted RBP9.64□□□□□ -0.87
CDC42EP3-205ENST00000494083 MSH5O43196 834 aa9.41□□□□□ -0.9
CDC42EP3-205ENST00000494083 POTEDQ86YR6 584 aa9□□□□□ -0.97
CDC42EP3-205ENST00000494083 MAPK8IP2Q13387 824 aaPredicted RBP8.95□□□□□ -0.98
CDC42EP3-205ENST00000494083 PPP4R3CPQ6ZMV5 832 aa8.82□□□□□ -1
CDC42EP3-205ENST00000494083 SCAF1Q9H7N4 1312 aaKnown RBP8.73□□□□□ -1.01
CDC42EP3-205ENST00000494083 DMRT2Q9Y5R5 561 aa8.72□□□□□ -1.01
CDC42EP3-205ENST00000494083 CNKSR2Q8WXI2 1034 aa8.56□□□□□ -1.04
CDC42EP3-205ENST00000494083 KCNA4P22459 653 aa8.52□□□□□ -1.05
CDC42EP3-205ENST00000494083 HOXD11P31277 338 aaPredicted RBP8.47□□□□□ -1.05
CDC42EP3-205ENST00000494083 NPM3O75607 178 aaKnown RBP8.46□□□□□ -1.06
CDC42EP3-205ENST00000494083 RNF216Q9NWF9 866 aaPredicted RBP8.44□□□□□ -1.06
CDC42EP3-205ENST00000494083 DCAF8L1A6NGE4 600 aa8.43□□□□□ -1.06
CDC42EP3-205ENST00000494083 NCBP3Q53F19 620 aaKnown RBP8.42□□□□□ -1.06
CDC42EP3-205ENST00000494083 RNF39Q9H2S5 420 aa8.13□□□□□ -1.11
CDC42EP3-205ENST00000494083 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.08□□□□□ -1.12
CDC42EP3-205ENST00000494083 DNAJC5BQ9UF47 199 aa8.07□□□□□ -1.12
CDC42EP3-205ENST00000494083 SLC4A2P04920 1241 aa8.06□□□□□ -1.12
CDC42EP3-205ENST00000494083 CACNB1Q02641 598 aaPredicted RBP8.03□□□□□ -1.12
CDC42EP3-205ENST00000494083 U3KPZ7 1027 aaPredicted RBP8□□□□□ -1.13
CDC42EP3-205ENST00000494083 SLC4A1APQ9BWU0 796 aaKnown RBP7.99□□□□□ -1.13
CDC42EP3-205ENST00000494083 C1QBPQ07021 282 aaKnown RBP7.94□□□□□ -1.14
CDC42EP3-205ENST00000494083 ZBTB22O15209 634 aa7.89□□□□□ -1.15
CDC42EP3-205ENST00000494083 SPINK5Q9NQ38 1064 aaPredicted RBP7.88□□□□□ -1.15
CDC42EP3-205ENST00000494083 FOXD4L1Q9NU39 408 aa7.78□□□□□ -1.16
CDC42EP3-205ENST00000494083 CAPN15O75808 1086 aa7.77□□□□□ -1.17
CDC42EP3-205ENST00000494083 MYCNP04198 464 aaPredicted RBP7.74□□□□□ -1.17
CDC42EP3-205ENST00000494083 TRHP20396 242 aaPredicted RBP7.73□□□□□ -1.17
CDC42EP3-205ENST00000494083 ATF5Q9Y2D1 282 aaPredicted RBP7.7□□□□□ -1.18
CDC42EP3-205ENST00000494083 DSG3P32926 999 aa7.69□□□□□ -1.18
CDC42EP3-205ENST00000494083 EHMT2Q96KQ7 1210 aa7.69□□□□□ -1.18
CDC42EP3-205ENST00000494083 ABCB7O75027 752 aa7.68□□□□□ -1.18
CDC42EP3-205ENST00000494083 SAMD1Q6SPF0 538 aaPredicted RBP7.67□□□□□ -1.18
CDC42EP3-205ENST00000494083 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.66□□□□□ -1.18
CDC42EP3-205ENST00000494083 HNRNPUL2Q1KMD3 747 aaKnown RBP7.66□□□□□ -1.18
CDC42EP3-205ENST00000494083 CSRNP3Q8WYN3 585 aa7.63□□□□□ -1.19
CDC42EP3-205ENST00000494083 ZNF219Q9P2Y4 722 aaPredicted RBP7.61□□□□□ -1.19
CDC42EP3-205ENST00000494083 APLP2Q06481 763 aa7.55□□□□□ -1.2
CDC42EP3-205ENST00000494083 POLA2Q14181 598 aa7.55□□□□□ -1.2
CDC42EP3-205ENST00000494083 ATXN8OSP0DMR3 200 aa7.43□□□□□ -1.22
CDC42EP3-205ENST00000494083 OSCARQ8IYS5 282 aa7.35□□□□□ -1.23
CDC42EP3-205ENST00000494083 MKRN4PQ13434 485 aaPredicted RBP7.32□□□□□ -1.24
CDC42EP3-205ENST00000494083 ZBTB12Q9Y330 459 aaPredicted RBP7.25□□□□□ -1.25
CDC42EP3-205ENST00000494083 RBM42Q9BTD8 480 aaKnown RBP7.22□□□□□ -1.25
CDC42EP3-205ENST00000494083 FBLN2P98095 1184 aa7.19□□□□□ -1.26
CDC42EP3-205ENST00000494083 REM2Q8IYK8 340 aaPredicted RBP7.12□□□□□ -1.27
CDC42EP3-205ENST00000494083 AKT1S1Q96B36 256 aa7.12□□□□□ -1.27
CDC42EP3-205ENST00000494083 SPDYE2BA6NHP3 402 aa7.11□□□□□ -1.27
CDC42EP3-205ENST00000494083 SPDYE6P0CI01 402 aa7.11□□□□□ -1.27
CDC42EP3-205ENST00000494083 SPDYE2Q495Y8 402 aa7.11□□□□□ -1.27
CDC42EP3-205ENST00000494083 ZNF692Q9BU19 519 aaPredicted RBP7.1□□□□□ -1.27
CDC42EP3-205ENST00000494083 CHRDL2Q6WN34 429 aa7.1□□□□□ -1.27
CDC42EP3-205ENST00000494083 PITPNM1O00562 1244 aa7.08□□□□□ -1.28
CDC42EP3-205ENST00000494083 SSUH2Q9Y2M2 353 aa7.08□□□□□ -1.28
CDC42EP3-205ENST00000494083 POTEHQ6S545 545 aa7.07□□□□□ -1.28
CDC42EP3-205ENST00000494083 PABPN1Q86U42 306 aaKnown RBP eCLIP7.04□□□□□ -1.28
CDC42EP3-205ENST00000494083 CLEC11AQ9Y240 323 aa7.01□□□□□ -1.29
CDC42EP3-205ENST00000494083 SPDYE4A6NLX3 237 aa7□□□□□ -1.29
CDC42EP3-205ENST00000494083 PIP4P2Q8N4L2 257 aa6.98□□□□□ -1.29
CDC42EP3-205ENST00000494083 SPDYE1Q8NFV5 336 aaPredicted RBP6.93□□□□□ -1.3
CDC42EP3-205ENST00000494083 FXR2P51116 673 aaKnown RBP eCLIP6.92□□□□□ -1.3
CDC42EP3-205ENST00000494083 CHADLQ6NUI6 762 aa6.91□□□□□ -1.3
CDC42EP3-205ENST00000494083 FKBP8Q14318 412 aa6.9□□□□□ -1.31
CDC42EP3-205ENST00000494083 PRKAR2AP13861 404 aaKnown RBP6.87□□□□□ -1.31
CDC42EP3-205ENST00000494083 PRR29P0C7W0 189 aa6.86□□□□□ -1.31
CDC42EP3-205ENST00000494083 PROM2Q8N271 834 aa6.84□□□□□ -1.31
CDC42EP3-205ENST00000494083 EVX2Q03828 476 aa6.83□□□□□ -1.32
CDC42EP3-205ENST00000494083 HAX1O00165 279 aa6.79□□□□□ -1.32
CDC42EP3-205ENST00000494083 CREBZFQ9NS37 354 aa6.77□□□□□ -1.33
CDC42EP3-205ENST00000494083 FARP1Q9Y4F1 1045 aaPredicted RBP6.74□□□□□ -1.33
CDC42EP3-205ENST00000494083 STAG3Q9UJ98 1225 aa6.73□□□□□ -1.33
CDC42EP3-205ENST00000494083 MNX1P50219 401 aaPredicted RBP6.72□□□□□ -1.33
CDC42EP3-205ENST00000494083 SP7Q8TDD2 431 aaPredicted RBP6.69□□□□□ -1.34
CDC42EP3-205ENST00000494083 C19orf67A6NJJ6 358 aa6.68□□□□□ -1.34
CDC42EP3-205ENST00000494083 CD44P16070 742 aaKnown RBP6.66□□□□□ -1.34
CDC42EP3-205ENST00000494083 MIER1Q8N108 512 aa6.65□□□□□ -1.35
CDC42EP3-205ENST00000494083 PLCD3Q8N3E9 789 aa6.62□□□□□ -1.35
CDC42EP3-205ENST00000494083 ZRANB1Q9UGI0 708 aa6.59□□□□□ -1.35
CDC42EP3-205ENST00000494083 VASPP50552 380 aaPredicted RBP6.58□□□□□ -1.36
CDC42EP3-205ENST00000494083 RASEFQ8IZ41 740 aa6.58□□□□□ -1.36
CDC42EP3-205ENST00000494083 GABBR2O75899 941 aa6.58□□□□□ -1.36
CDC42EP3-205ENST00000494083 PHF12Q96QT6 1004 aa6.58□□□□□ -1.36
CDC42EP3-205ENST00000494083 TSPYL2Q9H2G4 693 aaPredicted RBP6.58□□□□□ -1.36
CDC42EP3-205ENST00000494083 FBXO3Q9UK99 471 aa6.54□□□□□ -1.36
CDC42EP3-205ENST00000494083 GALR2O43603 387 aaPredicted RBP6.54□□□□□ -1.36
CDC42EP3-205ENST00000494083 NPM1P06748 294 aaKnown RBP eCLIP6.53□□□□□ -1.36
CDC42EP3-205ENST00000494083 IFNLR1Q8IU57 520 aaPredicted RBP6.52□□□□□ -1.37
CDC42EP3-205ENST00000494083 ZNF579Q8NAF0 562 aaKnown RBP6.52□□□□□ -1.37
CDC42EP3-205ENST00000494083 NUBP1P53384 320 aa6.51□□□□□ -1.37
CDC42EP3-205ENST00000494083 CCDC61Q9Y6R9 512 aa6.51□□□□□ -1.37
CDC42EP3-205ENST00000494083 PLEKHG5O94827 1062 aa6.51□□□□□ -1.37
CDC42EP3-205ENST00000494083 POTEIP0CG38 1075 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms