RNA–Protein interactions for RNA: ENST00000489071.5

ERGIC3-218, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-218ENST00000489071 NLRP3Q96P20 1036 aa10.97□□□□□ -0.65
ERGIC3-218ENST00000489071 CRAMP1Q96RY5 1269 aa10.97□□□□□ -0.65
ERGIC3-218ENST00000489071 TMX4Q9H1E5 349 aaPredicted RBP10.97□□□□□ -0.65
ERGIC3-218ENST00000489071 SUPT16HQ9Y5B9 1047 aaKnown RBP10.97□□□□□ -0.65
ERGIC3-218ENST00000489071 UBN2Q6ZU65 1347 aa10.97□□□□□ -0.65
ERGIC3-218ENST00000489071 ZNF541Q9H0D2 1346 aa10.96□□□□□ -0.65
ERGIC3-218ENST00000489071 NTSR2O95665 410 aa10.96□□□□□ -0.65
ERGIC3-218ENST00000489071 POTEIP0CG38 1075 aa10.96□□□□□ -0.65
ERGIC3-218ENST00000489071 POTEJP0CG39 1038 aa10.96□□□□□ -0.65
ERGIC3-218ENST00000489071 EPHX2P34913 555 aa10.96□□□□□ -0.65
ERGIC3-218ENST00000489071 EIF6P56537 245 aaKnown RBP10.96□□□□□ -0.65
ERGIC3-218ENST00000489071 EAPPQ56P03 285 aaPredicted RBP10.96□□□□□ -0.65
ERGIC3-218ENST00000489071 HSP90AB3PQ58FF7 597 aa10.96□□□□□ -0.65
ERGIC3-218ENST00000489071 GPC2Q8N158 579 aa10.96□□□□□ -0.65
ERGIC3-218ENST00000489071 UTP14AQ9BVJ6 771 aaKnown RBP10.96□□□□□ -0.65
ERGIC3-218ENST00000489071 HSPA1AP0DMV8 641 aaKnown RBP10.95□□□□□ -0.66
ERGIC3-218ENST00000489071 HSPA1BP0DMV9 641 aaKnown RBP10.95□□□□□ -0.66
ERGIC3-218ENST00000489071 BRPF1P55201 1214 aaPredicted RBP10.95□□□□□ -0.66
ERGIC3-218ENST00000489071 GSE1Q14687 1217 aa10.95□□□□□ -0.66
ERGIC3-218ENST00000489071 PDIA6Q15084 440 aa10.95□□□□□ -0.66
ERGIC3-218ENST00000489071 ALDH1L2Q3SY69 923 aa10.95□□□□□ -0.66
ERGIC3-218ENST00000489071 SLC10A5Q5PT55 438 aa10.95□□□□□ -0.66
ERGIC3-218ENST00000489071 LRP10Q7Z4F1 713 aa10.95□□□□□ -0.66
ERGIC3-218ENST00000489071 SNED1Q8TER0 1413 aa10.94□□□□□ -0.66
ERGIC3-218ENST00000489071 CACNA1FO60840 1977 aa10.94□□□□□ -0.66
ERGIC3-218ENST00000489071 PASKQ96RG2 1323 aa10.94□□□□□ -0.66
ERGIC3-218ENST00000489071 PPEF1O14829 653 aaPredicted RBP10.94□□□□□ -0.66
ERGIC3-218ENST00000489071 COL13A1Q5TAT6 717 aaPredicted RBP10.94□□□□□ -0.66
ERGIC3-218ENST00000489071 LARGE2Q8N3Y3 721 aa10.94□□□□□ -0.66
ERGIC3-218ENST00000489071 BBXQ8WY36 941 aaPredicted RBP10.94□□□□□ -0.66
ERGIC3-218ENST00000489071 VPS33BQ9H267 617 aa10.94□□□□□ -0.66
ERGIC3-218ENST00000489071 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.94□□□□□ -0.66
ERGIC3-218ENST00000489071 MKRN1Q9UHC7 482 aaKnown RBP10.94□□□□□ -0.66
ERGIC3-218ENST00000489071 ANKRD36CQ5JPF3 1778 aa10.94□□□□□ -0.66
ERGIC3-218ENST00000489071 TMEM88BA6NKF7 163 aa10.93□□□□□ -0.66
ERGIC3-218ENST00000489071 ITGBL1O95965 494 aaPredicted RBP10.93□□□□□ -0.66
ERGIC3-218ENST00000489071 MS4A1P11836 297 aa10.93□□□□□ -0.66
ERGIC3-218ENST00000489071 LMOD1P29536 600 aaPredicted RBP10.93□□□□□ -0.66
ERGIC3-218ENST00000489071 RARSP54136 660 aaKnown RBP10.93□□□□□ -0.66
ERGIC3-218ENST00000489071 RRP1P56182 461 aaKnown RBP10.93□□□□□ -0.66
ERGIC3-218ENST00000489071 EXOSC9Q06265 439 aaKnown RBP10.93□□□□□ -0.66
ERGIC3-218ENST00000489071 PROSER3Q2NL68 480 aa10.93□□□□□ -0.66
ERGIC3-218ENST00000489071 COPS6Q7L5N1 327 aa10.93□□□□□ -0.66
ERGIC3-218ENST00000489071 DDX21Q9NR30 783 aaKnown RBP eCLIP10.93□□□□□ -0.66
ERGIC3-218ENST00000489071 MBIPQ9NS73 344 aa10.93□□□□□ -0.66
ERGIC3-218ENST00000489071 TCERG1O14776 1098 aaKnown RBP10.92□□□□□ -0.66
ERGIC3-218ENST00000489071 BBOX1O75936 387 aa10.92□□□□□ -0.66
ERGIC3-218ENST00000489071 ANXA1P04083 346 aa10.92□□□□□ -0.66
ERGIC3-218ENST00000489071 HOXB7P09629 217 aa10.92□□□□□ -0.66
ERGIC3-218ENST00000489071 AIMP1Q12904 312 aaKnown RBP10.92□□□□□ -0.66
ERGIC3-218ENST00000489071 TCIRG1Q13488 830 aa10.92□□□□□ -0.66
ERGIC3-218ENST00000489071 NIM1KQ8IY84 436 aa10.92□□□□□ -0.66
ERGIC3-218ENST00000489071 TNS4Q8IZW8 715 aa10.92□□□□□ -0.66
ERGIC3-218ENST00000489071 CNTROBQ8N137 903 aa10.92□□□□□ -0.66
ERGIC3-218ENST00000489071 SUPT20HQ8NEM7 779 aa10.92□□□□□ -0.66
ERGIC3-218ENST00000489071 XAGE3Q8WTP9 111 aa10.92□□□□□ -0.66
ERGIC3-218ENST00000489071 TSR2Q969E8 191 aaKnown RBP10.92□□□□□ -0.66
ERGIC3-218ENST00000489071 ATP6V0A2Q9Y487 856 aa10.92□□□□□ -0.66
ERGIC3-218ENST00000489071 LAS1LQ9Y4W2 734 aaKnown RBP10.92□□□□□ -0.66
ERGIC3-218ENST00000489071 GTF3C3Q9Y5Q9 886 aa10.92□□□□□ -0.66
ERGIC3-218ENST00000489071 GJA3Q9Y6H8 435 aa10.92□□□□□ -0.66
ERGIC3-218ENST00000489071 ADAMTSL1Q8N6G6 1762 aa10.92□□□□□ -0.66
ERGIC3-218ENST00000489071 CNTNAP1P78357 1384 aa10.91□□□□□ -0.66
ERGIC3-218ENST00000489071 LAMB2P55268 1798 aa10.91□□□□□ -0.66
ERGIC3-218ENST00000489071 PPIP5K2O43314 1243 aa10.91□□□□□ -0.66
ERGIC3-218ENST00000489071 AAMPQ13685 434 aa10.91□□□□□ -0.66
ERGIC3-218ENST00000489071 PDE3AQ14432 1141 aa10.91□□□□□ -0.66
ERGIC3-218ENST00000489071 C3orf67Q6ZVT6 689 aa10.91□□□□□ -0.66
ERGIC3-218ENST00000489071 DDX46Q7L014 1031 aaKnown RBP10.91□□□□□ -0.66
ERGIC3-218ENST00000489071 NLRP10Q86W26 655 aa10.91□□□□□ -0.66
ERGIC3-218ENST00000489071 SP8Q8IXZ3 490 aa10.91□□□□□ -0.66
ERGIC3-218ENST00000489071 NECTIN2Q92692 538 aa10.91□□□□□ -0.66
ERGIC3-218ENST00000489071 TRMT112Q9UI30 125 aaKnown RBP10.91□□□□□ -0.66
ERGIC3-218ENST00000489071 ABCC4O15439 1325 aa10.9□□□□□ -0.66
ERGIC3-218ENST00000489071 SH3TC1Q8TE82 1336 aa10.9□□□□□ -0.66
ERGIC3-218ENST00000489071 KIF16BQ96L93 1317 aa10.9□□□□□ -0.66
ERGIC3-218ENST00000489071 IPO8O15397 1037 aaKnown RBP10.9□□□□□ -0.66
ERGIC3-218ENST00000489071 VAMP4O75379 141 aa10.9□□□□□ -0.66
ERGIC3-218ENST00000489071 NUBP1P53384 320 aa10.9□□□□□ -0.66
ERGIC3-218ENST00000489071 TWISTNBQ3B726 338 aaPredicted RBP10.9□□□□□ -0.66
ERGIC3-218ENST00000489071 HDGFL1Q5TGJ6 251 aa10.9□□□□□ -0.66
ERGIC3-218ENST00000489071 MAP1SQ66K74 1059 aaPredicted RBP10.9□□□□□ -0.66
ERGIC3-218ENST00000489071 TRPM7Q96QT4 1865 aa10.89□□□□□ -0.67
ERGIC3-218ENST00000489071 HCLS1P14317 486 aaPredicted RBP10.89□□□□□ -0.67
ERGIC3-218ENST00000489071 DPP8Q6V1X1 898 aaPredicted RBP10.89□□□□□ -0.67
ERGIC3-218ENST00000489071 USP50Q70EL3 339 aaPredicted RBP10.89□□□□□ -0.67
ERGIC3-218ENST00000489071 TMC4Q7Z404 712 aa10.89□□□□□ -0.67
ERGIC3-218ENST00000489071 MPNDQ8N594 471 aa10.89□□□□□ -0.67
ERGIC3-218ENST00000489071 PLBD2Q8NHP8 589 aa10.89□□□□□ -0.67
ERGIC3-218ENST00000489071 ARHGAP45Q92619 1136 aa10.89□□□□□ -0.67
ERGIC3-218ENST00000489071 RTFDC1Q9BY42 306 aaPredicted RBP10.89□□□□□ -0.67
ERGIC3-218ENST00000489071 CHPF2Q9P2E5 772 aa10.89□□□□□ -0.67
ERGIC3-218ENST00000489071 DBF4Q9UBU7 674 aaPredicted RBP10.89□□□□□ -0.67
ERGIC3-218ENST00000489071 ZNRF3Q9ULT6 936 aa10.89□□□□□ -0.67
ERGIC3-218ENST00000489071 COL4A5P29400 1685 aa10.89□□□□□ -0.67
ERGIC3-218ENST00000489071 TAF1P21675 1872 aa10.88□□□□□ -0.67
ERGIC3-218ENST00000489071 EPS15P42566 896 aa10.88□□□□□ -0.67
ERGIC3-218ENST00000489071 VEGFBP49765 207 aa10.88□□□□□ -0.67
ERGIC3-218ENST00000489071 SCNN1DP51172 638 aa10.88□□□□□ -0.67
ERGIC3-218ENST00000489071 GRAPQ13588 217 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms