RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 RPGRQ92834 1020 aaKnown RBP26■■□□□ 1.75
CTDSPL-206ENST00000443503 ERCC4Q92889 916 aaPredicted RBP26■■□□□ 1.75
CTDSPL-206ENST00000443503 TMEM2Q9UHN6 1383 aa26■■□□□ 1.75
CTDSPL-206ENST00000443503 C6orf229H3BNL8 230 aa26■■□□□ 1.75
CTDSPL-206ENST00000443503 EPB41L2O43491 1005 aaKnown RBP26■■□□□ 1.75
CTDSPL-206ENST00000443503 ISM2Q6H9L7 571 aa26■■□□□ 1.75
CTDSPL-206ENST00000443503 KLHDC4Q8TBB5 520 aa26■■□□□ 1.75
CTDSPL-206ENST00000443503 ARHGAP29Q52LW3 1261 aa25.99■■□□□ 1.75
CTDSPL-206ENST00000443503 ODF2Q5BJF6 829 aa25.99■■□□□ 1.75
CTDSPL-206ENST00000443503 CCDC194A0A1B0GVG4 234 aa25.99■■□□□ 1.75
CTDSPL-206ENST00000443503 HELBQ8NG08 1087 aaPredicted RBP25.99■■□□□ 1.75
CTDSPL-206ENST00000443503 TSPY2A6NKD2 308 aa25.99■■□□□ 1.75
CTDSPL-206ENST00000443503 SLC4A8Q2Y0W8 1093 aa25.99■■□□□ 1.75
CTDSPL-206ENST00000443503 CRACR2BQ8N4Y2 399 aaPredicted RBP25.99■■□□□ 1.75
CTDSPL-206ENST00000443503 ERVK-7P63135 1459 aa25.98■■□□□ 1.75
CTDSPL-206ENST00000443503 HOXB7P09629 217 aa25.98■■□□□ 1.75
CTDSPL-206ENST00000443503 ATP6V1AP38606 617 aa25.98■■□□□ 1.75
CTDSPL-206ENST00000443503 STX1AQ16623 288 aa25.98■■□□□ 1.75
CTDSPL-206ENST00000443503 CHST3Q7LGC8 479 aa25.98■■□□□ 1.75
CTDSPL-206ENST00000443503 KDM5CP41229 1560 aa25.98■■□□□ 1.75
CTDSPL-206ENST00000443503 TOP1P11387 765 aaKnown RBP25.98■■□□□ 1.75
CTDSPL-206ENST00000443503 DACT1Q9NYF0 836 aa25.98■■□□□ 1.75
CTDSPL-206ENST00000443503 NEO1Q92859 1461 aa25.97■■□□□ 1.75
CTDSPL-206ENST00000443503 ZBTB43O43298 467 aa25.97■■□□□ 1.75
CTDSPL-206ENST00000443503 PRIM1P49642 420 aaKnown RBP25.97■■□□□ 1.75
CTDSPL-206ENST00000443503 SIRT1Q96EB6 747 aa25.97■■□□□ 1.75
CTDSPL-206ENST00000443503 LUC7LQ9NQ29 371 aaKnown RBP25.97■■□□□ 1.75
CTDSPL-206ENST00000443503 ZNF76P36508 570 aa25.97■■□□□ 1.75
CTDSPL-206ENST00000443503 INTS4Q96HW7 963 aaKnown RBP25.97■■□□□ 1.75
CTDSPL-206ENST00000443503 TRMT1Q9NXH9 659 aaKnown RBP25.96■■□□□ 1.75
CTDSPL-206ENST00000443503 UGGT1Q9NYU2 1555 aa25.96■■□□□ 1.75
CTDSPL-206ENST00000443503 CYP7A1P22680 504 aa25.96■■□□□ 1.75
CTDSPL-206ENST00000443503 NBPF5PQ86XG9 351 aaPredicted RBP25.96■■□□□ 1.75
CTDSPL-206ENST00000443503 TIMM10P62072 90 aa25.96■■□□□ 1.75
CTDSPL-206ENST00000443503 SF3B2Q13435 895 aaKnown RBP25.96■■□□□ 1.75
CTDSPL-206ENST00000443503 NIP7Q9Y221 180 aaKnown RBP eCLIP25.96■■□□□ 1.75
CTDSPL-206ENST00000443503 MYO5CQ9NQX4 1742 aa25.96■■□□□ 1.75
CTDSPL-206ENST00000443503 CCDC171Q6TFL3 1326 aa25.96■■□□□ 1.75
CTDSPL-206ENST00000443503 C16orf45Q96MC5 204 aaPredicted RBP25.95■■□□□ 1.75
CTDSPL-206ENST00000443503 WTAPQ15007 396 aa25.95■■□□□ 1.75
CTDSPL-206ENST00000443503 TMOD2Q9NZR1 351 aa25.95■■□□□ 1.75
CTDSPL-206ENST00000443503 DDB1Q16531 1140 aa25.95■■□□□ 1.74
CTDSPL-206ENST00000443503 UVSSAQ2YD98 709 aa25.95■■□□□ 1.74
CTDSPL-206ENST00000443503 DZIP3Q86Y13 1208 aaKnown RBP25.95■■□□□ 1.74
CTDSPL-206ENST00000443503 ALG1Q9BT22 464 aa25.95■■□□□ 1.74
CTDSPL-206ENST00000443503 TRMT2AQ8IZ69 625 aaKnown RBP25.95■■□□□ 1.74
CTDSPL-206ENST00000443503 ANKRD18AQ8IVF6 992 aa25.94■■□□□ 1.74
CTDSPL-206ENST00000443503 UBXN4Q92575 508 aa25.94■■□□□ 1.74
CTDSPL-206ENST00000443503 PRC1O43663 620 aa25.94■■□□□ 1.74
CTDSPL-206ENST00000443503 SYCP1Q15431 976 aa25.93■■□□□ 1.74
CTDSPL-206ENST00000443503 CCDC102BQ68D86 513 aa25.93■■□□□ 1.74
CTDSPL-206ENST00000443503 SLC4A4Q9Y6R1 1079 aa25.93■■□□□ 1.74
CTDSPL-206ENST00000443503 RNF113AO15541 343 aaKnown RBP25.93■■□□□ 1.74
CTDSPL-206ENST00000443503 LDHCP07864 332 aa25.93■■□□□ 1.74
CTDSPL-206ENST00000443503 SYT1P21579 422 aa25.93■■□□□ 1.74
CTDSPL-206ENST00000443503 PDE4BQ07343 736 aa25.93■■□□□ 1.74
CTDSPL-206ENST00000443503 IRS4O14654 1257 aaPredicted RBP25.92■■□□□ 1.74
CTDSPL-206ENST00000443503 KIF18AQ8NI77 898 aa25.92■■□□□ 1.74
CTDSPL-206ENST00000443503 CDR1P51861 262 aa25.92■■□□□ 1.74
CTDSPL-206ENST00000443503 CCDC96Q2M329 555 aa25.92■■□□□ 1.74
CTDSPL-206ENST00000443503 FAM89AQ96GI7 184 aa25.92■■□□□ 1.74
CTDSPL-206ENST00000443503 KDM5AP29375 1690 aaKnown RBP25.92■■□□□ 1.74
CTDSPL-206ENST00000443503 ZNF521Q96K83 1311 aa25.92■■□□□ 1.74
CTDSPL-206ENST00000443503 PLA2R1Q13018 1463 aa25.92■■□□□ 1.74
CTDSPL-206ENST00000443503 KIF2AO00139 706 aaPredicted RBP25.92■■□□□ 1.74
CTDSPL-206ENST00000443503 APOBRQ0VD83 1088 aa25.92■■□□□ 1.74
CTDSPL-206ENST00000443503 METTL22Q9BUU2 404 aaPredicted RBP25.92■■□□□ 1.74
CTDSPL-206ENST00000443503 STX8Q9UNK0 236 aa25.92■■□□□ 1.74
CTDSPL-206ENST00000443503 CAVIN2O95810 425 aa25.91■■□□□ 1.74
CTDSPL-206ENST00000443503 TNNT1P13805 278 aa25.91■■□□□ 1.74
CTDSPL-206ENST00000443503 RUFY3Q7L099 469 aa25.91■■□□□ 1.74
CTDSPL-206ENST00000443503 DBNDD2Q9BQY9 259 aa25.91■■□□□ 1.74
CTDSPL-206ENST00000443503 ABCC4O15439 1325 aa25.91■■□□□ 1.74
CTDSPL-206ENST00000443503 CCDC181Q5TID7 509 aa25.91■■□□□ 1.74
CTDSPL-206ENST00000443503 TMC6Q7Z403 805 aa25.91■■□□□ 1.74
CTDSPL-206ENST00000443503 CPLX3Q8WVH0 158 aa25.91■■□□□ 1.74
CTDSPL-206ENST00000443503 PLEKHF1Q96S99 279 aa25.91■■□□□ 1.74
CTDSPL-206ENST00000443503 IL17REQ8NFR9 667 aa25.91■■□□□ 1.74
CTDSPL-206ENST00000443503 PLXNC1O60486 1568 aa25.91■■□□□ 1.74
CTDSPL-206ENST00000443503 KIF5BP33176 963 aa25.91■■□□□ 1.74
CTDSPL-206ENST00000443503 RAD50Q92878 1312 aa25.9■■□□□ 1.74
CTDSPL-206ENST00000443503 BAG3O95817 575 aa25.9■■□□□ 1.74
CTDSPL-206ENST00000443503 RFC4P35249 363 aa25.9■■□□□ 1.74
CTDSPL-206ENST00000443503 EIF4A1P60842 406 aaKnown RBP25.9■■□□□ 1.74
CTDSPL-206ENST00000443503 PDCL2Q8N4E4 241 aa25.9■■□□□ 1.74
CTDSPL-206ENST00000443503 VAT1LQ9HCJ6 419 aa25.9■■□□□ 1.74
CTDSPL-206ENST00000443503 ZNF219Q9P2Y4 722 aaPredicted RBP25.9■■□□□ 1.74
CTDSPL-206ENST00000443503 KIAA0232Q92628 1395 aa25.9■■□□□ 1.74
CTDSPL-206ENST00000443503 SYKP43405 635 aa25.9■■□□□ 1.74
CTDSPL-206ENST00000443503 DHX32Q7L7V1 743 aaKnown RBP25.9■■□□□ 1.74
CTDSPL-206ENST00000443503 ZNF830Q96NB3 372 aaPredicted RBP25.9■■□□□ 1.74
CTDSPL-206ENST00000443503 TTC37Q6PGP7 1564 aa25.9■■□□□ 1.74
CTDSPL-206ENST00000443503 ANO6Q4KMQ2 910 aa25.89■■□□□ 1.74
CTDSPL-206ENST00000443503 FAM200AQ8TCP9 573 aa25.89■■□□□ 1.74
CTDSPL-206ENST00000443503 KRT23Q9C075 422 aa25.89■■□□□ 1.74
CTDSPL-206ENST00000443503 KIAA1328Q86T90 577 aa25.89■■□□□ 1.74
CTDSPL-206ENST00000443503 ZNF496Q96IT1 587 aaPredicted RBP25.89■■□□□ 1.74
CTDSPL-206ENST00000443503 SGSM2O43147 1006 aa25.89■■□□□ 1.73
CTDSPL-206ENST00000443503 ZSCAN12O43309 604 aa25.89■■□□□ 1.73
CTDSPL-206ENST00000443503 AXDND1Q5T1B0 1012 aaPredicted RBP25.89■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms