RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 QSER1Q2KHR3 1735 aa9.73□□□□□ -0.85
COPS3-203ENST00000439936 KDM3BQ7LBC6 1761 aa9.72□□□□□ -0.85
COPS3-203ENST00000439936 CANXP27824 592 aaKnown RBP9.72□□□□□ -0.85
COPS3-203ENST00000439936 CALD1Q05682 793 aaKnown RBP9.72□□□□□ -0.85
COPS3-203ENST00000439936 NGEFQ8N5V2 710 aa9.72□□□□□ -0.85
COPS3-203ENST00000439936 SPON1Q9HCB6 807 aa9.72□□□□□ -0.85
COPS3-203ENST00000439936 MBIPQ9NS73 344 aa9.72□□□□□ -0.85
COPS3-203ENST00000439936 ZBTB1Q9Y2K1 713 aa9.72□□□□□ -0.85
COPS3-203ENST00000439936 CASZ1Q86V15 1759 aa9.71□□□□□ -0.85
COPS3-203ENST00000439936 KRT24Q2M2I5 525 aa9.71□□□□□ -0.86
COPS3-203ENST00000439936 WDR63Q8IWG1 891 aa9.71□□□□□ -0.86
COPS3-203ENST00000439936 MTFR1LQ9H019 292 aa9.71□□□□□ -0.86
COPS3-203ENST00000439936 IFT57Q9NWB7 429 aa9.71□□□□□ -0.86
COPS3-203ENST00000439936 CICQ96RK0 1608 aaPredicted RBP9.71□□□□□ -0.86
COPS3-203ENST00000439936 RFC4P35249 363 aa9.7□□□□□ -0.86
COPS3-203ENST00000439936 PIP4K2AP48426 406 aaPredicted RBP9.7□□□□□ -0.86
COPS3-203ENST00000439936 EIF5P55010 431 aaKnown RBP9.7□□□□□ -0.86
COPS3-203ENST00000439936 SOS1Q07889 1333 aaPredicted RBP9.69□□□□□ -0.86
COPS3-203ENST00000439936 IL16Q14005 1332 aa9.69□□□□□ -0.86
COPS3-203ENST00000439936 NBPF26B4DH59 902 aa9.69□□□□□ -0.86
COPS3-203ENST00000439936 ELL2O00472 640 aaPredicted RBP9.69□□□□□ -0.86
COPS3-203ENST00000439936 EIF2S2P20042 333 aaKnown RBP9.69□□□□□ -0.86
COPS3-203ENST00000439936 IL6STP40189 918 aaPredicted RBP9.69□□□□□ -0.86
COPS3-203ENST00000439936 NBPF10Q6P3W6 841 aaKnown RBP9.69□□□□□ -0.86
COPS3-203ENST00000439936 NBPF15Q8N660 670 aa9.69□□□□□ -0.86
COPS3-203ENST00000439936 ZC3H15Q8WU90 426 aaKnown RBP9.69□□□□□ -0.86
COPS3-203ENST00000439936 SRP68Q9UHB9 627 aaKnown RBP9.69□□□□□ -0.86
COPS3-203ENST00000439936 SMAPO00193 183 aa9.68□□□□□ -0.86
COPS3-203ENST00000439936 DUSP27Q5VZP5 1158 aa9.68□□□□□ -0.86
COPS3-203ENST00000439936 MSL1Q68DK7 614 aa9.68□□□□□ -0.86
COPS3-203ENST00000439936 C8orf58Q8NAV2 365 aa9.68□□□□□ -0.86
COPS3-203ENST00000439936 NECTIN2Q92692 538 aa9.68□□□□□ -0.86
COPS3-203ENST00000439936 TSR2Q969E8 191 aaKnown RBP9.68□□□□□ -0.86
COPS3-203ENST00000439936 CDCA7LQ96GN5 454 aa9.68□□□□□ -0.86
COPS3-203ENST00000439936 TBC1D2BQ9UPU7 963 aa9.68□□□□□ -0.86
COPS3-203ENST00000439936 ZNF521Q96K83 1311 aa9.67□□□□□ -0.86
COPS3-203ENST00000439936 ZPR1O75312 459 aa9.67□□□□□ -0.86
COPS3-203ENST00000439936 GYS1P13807 737 aa9.67□□□□□ -0.86
COPS3-203ENST00000439936 PRSS12P56730 875 aa9.67□□□□□ -0.86
COPS3-203ENST00000439936 NLGN1Q8N2Q7 840 aa9.67□□□□□ -0.86
COPS3-203ENST00000439936 TSPYL6Q8N831 410 aa9.67□□□□□ -0.86
COPS3-203ENST00000439936 ARXQ96QS3 562 aa9.67□□□□□ -0.86
COPS3-203ENST00000439936 WBP1LQ9NX94 342 aa9.67□□□□□ -0.86
COPS3-203ENST00000439936 NARFQ9UHQ1 456 aa9.67□□□□□ -0.86
COPS3-203ENST00000439936 TSR3Q9UJK0 312 aaKnown RBP9.67□□□□□ -0.86
COPS3-203ENST00000439936 ZNF330Q9Y3S2 320 aaPredicted RBP9.67□□□□□ -0.86
COPS3-203ENST00000439936 A0A087WZG4 1122 aa9.66□□□□□ -0.86
COPS3-203ENST00000439936 MYL6BP14649 208 aa9.66□□□□□ -0.86
COPS3-203ENST00000439936 USPL1Q5W0Q7 1092 aa9.66□□□□□ -0.86
COPS3-203ENST00000439936 NPM2Q86SE8 214 aaKnown RBP9.66□□□□□ -0.86
COPS3-203ENST00000439936 NPDC1Q9NQX5 325 aaPredicted RBP9.66□□□□□ -0.86
COPS3-203ENST00000439936 COL24A1Q17RW2 1714 aa9.66□□□□□ -0.86
COPS3-203ENST00000439936 COL15A1P39059 1388 aa9.66□□□□□ -0.86
COPS3-203ENST00000439936 USP42Q9H9J4 1324 aaKnown RBP9.65□□□□□ -0.86
COPS3-203ENST00000439936 GPR37O15354 613 aa9.65□□□□□ -0.86
COPS3-203ENST00000439936 ANXA1P04083 346 aa9.65□□□□□ -0.86
COPS3-203ENST00000439936 HOXB7P09629 217 aa9.65□□□□□ -0.86
COPS3-203ENST00000439936 POLD1P28340 1107 aa9.65□□□□□ -0.86
COPS3-203ENST00000439936 TM4SF1P30408 202 aa9.65□□□□□ -0.86
COPS3-203ENST00000439936 DZIP3Q86Y13 1208 aaKnown RBP9.65□□□□□ -0.86
COPS3-203ENST00000439936 GPIHBP1Q8IV16 184 aa9.65□□□□□ -0.86
COPS3-203ENST00000439936 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.65□□□□□ -0.86
COPS3-203ENST00000439936 PPP1R1BQ9UD71 204 aaPredicted RBP9.65□□□□□ -0.86
COPS3-203ENST00000439936 CAMTA2O94983 1202 aa9.64□□□□□ -0.87
COPS3-203ENST00000439936 EXOSC9Q06265 439 aaKnown RBP9.64□□□□□ -0.87
COPS3-203ENST00000439936 PROSER3Q2NL68 480 aa9.64□□□□□ -0.87
COPS3-203ENST00000439936 TTLL7Q6ZT98 887 aa9.64□□□□□ -0.87
COPS3-203ENST00000439936 LRP10Q7Z4F1 713 aa9.64□□□□□ -0.87
COPS3-203ENST00000439936 LRCH3Q96II8 777 aa9.64□□□□□ -0.87
COPS3-203ENST00000439936 DDX21Q9NR30 783 aaKnown RBP eCLIP9.64□□□□□ -0.87
COPS3-203ENST00000439936 C4AP0C0L4 1744 aa9.64□□□□□ -0.87
COPS3-203ENST00000439936 LAMB4A4D0S4 1761 aa9.64□□□□□ -0.87
COPS3-203ENST00000439936 ERBB4Q15303 1308 aa9.64□□□□□ -0.87
COPS3-203ENST00000439936 VAMP4O75379 141 aa9.63□□□□□ -0.87
COPS3-203ENST00000439936 MMP10P09238 476 aa9.63□□□□□ -0.87
COPS3-203ENST00000439936 SLFN5Q08AF3 891 aa9.63□□□□□ -0.87
COPS3-203ENST00000439936 HDGFL1Q5TGJ6 251 aa9.63□□□□□ -0.87
COPS3-203ENST00000439936 PACS2Q86VP3 889 aa9.63□□□□□ -0.87
COPS3-203ENST00000439936 MYH16Q9H6N6 1097 aa9.63□□□□□ -0.87
COPS3-203ENST00000439936 DBF4Q9UBU7 674 aaPredicted RBP9.63□□□□□ -0.87
COPS3-203ENST00000439936 FANCIQ9NVI1 1328 aa9.63□□□□□ -0.87
COPS3-203ENST00000439936 LRP5O75197 1615 aa9.63□□□□□ -0.87
COPS3-203ENST00000439936 ZMYND10O75800 440 aa9.63□□□□□ -0.87
COPS3-203ENST00000439936 AIMP1Q12904 312 aaKnown RBP9.63□□□□□ -0.87
COPS3-203ENST00000439936 NFIXQ14938 502 aa9.63□□□□□ -0.87
COPS3-203ENST00000439936 HLFQ16534 295 aa9.63□□□□□ -0.87
COPS3-203ENST00000439936 TWISTNBQ3B726 338 aaPredicted RBP9.63□□□□□ -0.87
COPS3-203ENST00000439936 TBC1D9BQ66K14 1250 aa9.63□□□□□ -0.87
COPS3-203ENST00000439936 COPS6Q7L5N1 327 aa9.63□□□□□ -0.87
COPS3-203ENST00000439936 TRMT2AQ8IZ69 625 aaKnown RBP9.63□□□□□ -0.87
COPS3-203ENST00000439936 CHPF2Q9P2E5 772 aa9.63□□□□□ -0.87
COPS3-203ENST00000439936 ERVV-1B6SEH8 477 aa9.62□□□□□ -0.87
COPS3-203ENST00000439936 E9PSI1 815 aa9.62□□□□□ -0.87
COPS3-203ENST00000439936 TCERG1O14776 1098 aaKnown RBP9.62□□□□□ -0.87
COPS3-203ENST00000439936 HNRNPUQ00839 825 aaKnown RBP eCLIP9.62□□□□□ -0.87
COPS3-203ENST00000439936 CCDC30Q5VVM6 783 aa9.62□□□□□ -0.87
COPS3-203ENST00000439936 CLEC4GQ6UXB4 293 aa9.62□□□□□ -0.87
COPS3-203ENST00000439936 BICDL1Q6ZP65 573 aa9.62□□□□□ -0.87
COPS3-203ENST00000439936 XAGE3Q8WTP9 111 aa9.62□□□□□ -0.87
COPS3-203ENST00000439936 SYT17Q9BSW7 474 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms