RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 TCIRG1Q13488 830 aa14.5□□□□□ -0.09
CLDN4-203ENST00000435050 MTX1Q13505 466 aa14.5□□□□□ -0.09
CLDN4-203ENST00000435050 ADCK5Q3MIX3 580 aa14.5□□□□□ -0.09
CLDN4-203ENST00000435050 VPS37DQ86XT2 251 aa14.5□□□□□ -0.09
CLDN4-203ENST00000435050 ATP6V1DQ9Y5K8 247 aa14.5□□□□□ -0.09
CLDN4-203ENST00000435050 CHGBP05060 677 aa14.49□□□□□ -0.09
CLDN4-203ENST00000435050 PAG1Q9NWQ8 432 aa14.49□□□□□ -0.09
CLDN4-203ENST00000435050 GJB2P29033 226 aa14.49□□□□□ -0.09
CLDN4-203ENST00000435050 CHST3Q7LGC8 479 aa14.49□□□□□ -0.09
CLDN4-203ENST00000435050 RAB11FIP4Q86YS3 637 aa14.49□□□□□ -0.09
CLDN4-203ENST00000435050 LSG1Q9H089 658 aaKnown RBP14.49□□□□□ -0.09
CLDN4-203ENST00000435050 FAM98CQ17RN3 349 aaKnown RBP14.49□□□□□ -0.09
CLDN4-203ENST00000435050 RALYLQ86SE5 291 aaKnown RBP14.49□□□□□ -0.09
CLDN4-203ENST00000435050 COPRSQ9NQ92 184 aa14.49□□□□□ -0.09
CLDN4-203ENST00000435050 IQSEC3Q9UPP2 1182 aaPredicted RBP14.49□□□□□ -0.09
CLDN4-203ENST00000435050 SOS2Q07890 1332 aaPredicted RBP14.49□□□□□ -0.09
CLDN4-203ENST00000435050 LTN1O94822 1766 aa14.48□□□□□ -0.09
CLDN4-203ENST00000435050 AKAP2Q9Y2D5 859 aa14.48□□□□□ -0.09
CLDN4-203ENST00000435050 NWD1Q149M9 1564 aa14.48□□□□□ -0.09
CLDN4-203ENST00000435050 SYCE3A1L190 88 aa14.48□□□□□ -0.09
CLDN4-203ENST00000435050 ATP2B3Q16720 1220 aa14.48□□□□□ -0.09
CLDN4-203ENST00000435050 NASPP49321 788 aaPredicted RBP14.48□□□□□ -0.09
CLDN4-203ENST00000435050 FAM182BQ5T319 152 aa14.48□□□□□ -0.09
CLDN4-203ENST00000435050 ZNF589Q86UQ0 364 aaPredicted RBP14.47□□□□□ -0.09
CLDN4-203ENST00000435050 CCT2P78371 535 aaKnown RBP14.47□□□□□ -0.09
CLDN4-203ENST00000435050 ATG3Q9NT62 314 aa14.47□□□□□ -0.09
CLDN4-203ENST00000435050 SLC27A2O14975 620 aa14.47□□□□□ -0.09
CLDN4-203ENST00000435050 ITGA6P23229 1130 aa14.47□□□□□ -0.09
CLDN4-203ENST00000435050 TRDNQ13061 729 aa14.47□□□□□ -0.09
CLDN4-203ENST00000435050 GNL2Q13823 731 aaKnown RBP14.47□□□□□ -0.09
CLDN4-203ENST00000435050 HLFQ16534 295 aa14.47□□□□□ -0.09
CLDN4-203ENST00000435050 MCMDC2Q4G0Z9 681 aa14.47□□□□□ -0.09
CLDN4-203ENST00000435050 CPLX1O14810 134 aa14.46□□□□□ -0.09
CLDN4-203ENST00000435050 XRCC6P12956 609 aaKnown RBP eCLIP14.46□□□□□ -0.09
CLDN4-203ENST00000435050 RRP12Q5JTH9 1297 aaKnown RBP14.46□□□□□ -0.09
CLDN4-203ENST00000435050 NEK1Q96PY6 1258 aa14.46□□□□□ -0.09
CLDN4-203ENST00000435050 NIP7Q9Y221 180 aaKnown RBP eCLIP14.46□□□□□ -0.09
CLDN4-203ENST00000435050 STX6O43752 255 aa14.46□□□□□ -0.09
CLDN4-203ENST00000435050 TOM1O60784 492 aa14.46□□□□□ -0.09
CLDN4-203ENST00000435050 GLIPR1L2Q4G1C9 344 aa14.46□□□□□ -0.09
CLDN4-203ENST00000435050 BRF1Q92994 677 aa14.46□□□□□ -0.09
CLDN4-203ENST00000435050 ZSCAN31Q96LW9 406 aaPredicted RBP14.46□□□□□ -0.09
CLDN4-203ENST00000435050 CCDC24Q8N4L8 307 aa14.46□□□□□ -0.1
CLDN4-203ENST00000435050 MPNDQ8N594 471 aa14.46□□□□□ -0.1
CLDN4-203ENST00000435050 ABCF2Q9UG63 623 aa14.46□□□□□ -0.1
CLDN4-203ENST00000435050 ADAMTSL3P82987 1691 aa14.46□□□□□ -0.1
CLDN4-203ENST00000435050 SALL3Q9BXA9 1300 aa14.45□□□□□ -0.1
CLDN4-203ENST00000435050 GUCY1B3Q02153 619 aa14.45□□□□□ -0.1
CLDN4-203ENST00000435050 ATP5JP18859 108 aa14.45□□□□□ -0.1
CLDN4-203ENST00000435050 ADORA1P30542 326 aa14.45□□□□□ -0.1
CLDN4-203ENST00000435050 ANKRD1Q15327 319 aa14.45□□□□□ -0.1
CLDN4-203ENST00000435050 U3KPZ7 1027 aaPredicted RBP14.45□□□□□ -0.1
CLDN4-203ENST00000435050 KRT32Q14532 448 aa14.44□□□□□ -0.1
CLDN4-203ENST00000435050 BICD2Q8TD16 824 aa14.44□□□□□ -0.1
CLDN4-203ENST00000435050 XAGE2Q96GT9 111 aa14.44□□□□□ -0.1
CLDN4-203ENST00000435050 RUFY3Q7L099 469 aa14.44□□□□□ -0.1
CLDN4-203ENST00000435050 PKNOX2Q96KN3 472 aa14.44□□□□□ -0.1
CLDN4-203ENST00000435050 TFIP11Q9UBB9 837 aaKnown RBP14.44□□□□□ -0.1
CLDN4-203ENST00000435050 CNPY2Q9Y2B0 182 aa14.44□□□□□ -0.1
CLDN4-203ENST00000435050 IGHMBP2P38935 993 aaKnown RBP14.44□□□□□ -0.1
CLDN4-203ENST00000435050 NFXL1Q6ZNB6 911 aa14.44□□□□□ -0.1
CLDN4-203ENST00000435050 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.44□□□□□ -0.1
CLDN4-203ENST00000435050 H7C1W4 665 aa14.44□□□□□ -0.1
CLDN4-203ENST00000435050 MBD3O95983 291 aa14.44□□□□□ -0.1
CLDN4-203ENST00000435050 PI16Q6UXB8 463 aa14.44□□□□□ -0.1
CLDN4-203ENST00000435050 GREM2Q9H772 168 aa14.44□□□□□ -0.1
CLDN4-203ENST00000435050 TAF5LO75529 589 aa14.43□□□□□ -0.1
CLDN4-203ENST00000435050 CSPP1Q1MSJ5 1256 aa14.43□□□□□ -0.1
CLDN4-203ENST00000435050 KLHL40Q2TBA0 621 aa14.43□□□□□ -0.1
CLDN4-203ENST00000435050 PXDNLA1KZ92 1463 aa14.43□□□□□ -0.1
CLDN4-203ENST00000435050 ERBB4Q15303 1308 aa14.43□□□□□ -0.1
CLDN4-203ENST00000435050 PHF14O94880 888 aa14.43□□□□□ -0.1
CLDN4-203ENST00000435050 FAM173BQ6P4H8 233 aa14.43□□□□□ -0.1
CLDN4-203ENST00000435050 Q6ZUG5 572 aa14.43□□□□□ -0.1
CLDN4-203ENST00000435050 NAP1L5Q96NT1 182 aaPredicted RBP14.43□□□□□ -0.1
CLDN4-203ENST00000435050 DCCP43146 1447 aa14.43□□□□□ -0.1
CLDN4-203ENST00000435050 SYT1P21579 422 aa14.43□□□□□ -0.1
CLDN4-203ENST00000435050 KBTBD3Q8NAB2 608 aa14.43□□□□□ -0.1
CLDN4-203ENST00000435050 SH2B1Q9NRF2 756 aaPredicted RBP14.43□□□□□ -0.1
CLDN4-203ENST00000435050 LARGE1O95461 756 aa14.42□□□□□ -0.1
CLDN4-203ENST00000435050 CPDO75976 1380 aa14.42□□□□□ -0.1
CLDN4-203ENST00000435050 RGPD1P0DJD0 1748 aa14.42□□□□□ -0.1
CLDN4-203ENST00000435050 ZAP70P43403 619 aa14.42□□□□□ -0.1
CLDN4-203ENST00000435050 LRP2BPQ9P2M1 347 aa14.42□□□□□ -0.1
CLDN4-203ENST00000435050 SNAP23O00161 211 aa14.41□□□□□ -0.1
CLDN4-203ENST00000435050 PDCP20941 246 aa14.41□□□□□ -0.1
CLDN4-203ENST00000435050 SF3A1Q15459 793 aaKnown RBP14.41□□□□□ -0.1
CLDN4-203ENST00000435050 ZRSR1Q15695 479 aaKnown RBP14.41□□□□□ -0.1
CLDN4-203ENST00000435050 SMIM5Q71RC9 77 aa14.41□□□□□ -0.1
CLDN4-203ENST00000435050 FBXW7Q969H0 707 aa14.41□□□□□ -0.1
CLDN4-203ENST00000435050 MAP3K15Q6ZN16 1313 aa14.41□□□□□ -0.1
CLDN4-203ENST00000435050 MSNP26038 577 aaKnown RBP14.41□□□□□ -0.1
CLDN4-203ENST00000435050 SLC9C2Q5TAH2 1124 aa14.41□□□□□ -0.1
CLDN4-203ENST00000435050 GIGYF2Q6Y7W6 1299 aaKnown RBP14.41□□□□□ -0.1
CLDN4-203ENST00000435050 AIDAQ96BJ3 306 aa14.41□□□□□ -0.1
CLDN4-203ENST00000435050 KIF3AQ9Y496 699 aa14.41□□□□□ -0.1
CLDN4-203ENST00000435050 RGPD2P0DJD1 1756 aa14.41□□□□□ -0.1
CLDN4-203ENST00000435050 ZSCAN22P10073 491 aaPredicted RBP14.41□□□□□ -0.1
CLDN4-203ENST00000435050 FOXO4P98177 505 aa14.41□□□□□ -0.1
CLDN4-203ENST00000435050 IMMTQ16891 758 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms