RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 NECTIN1Q15223 517 aa16.43■□□□□ 0.22
EBF3-201ENST00000355311 LRRC24Q50LG9 513 aa16.43■□□□□ 0.22
EBF3-201ENST00000355311 TOM1L2Q6ZVM7 507 aa16.43■□□□□ 0.22
EBF3-201ENST00000355311 STK11IPQ8N1F8 1099 aa16.43■□□□□ 0.22
EBF3-201ENST00000355311 INTS4Q96HW7 963 aaKnown RBP16.43■□□□□ 0.22
EBF3-201ENST00000355311 MAP7D2Q96T17 732 aa16.43■□□□□ 0.22
EBF3-201ENST00000355311 MTMR6Q9Y217 621 aa16.43■□□□□ 0.22
EBF3-201ENST00000355311 FKBP4Q02790 459 aaKnown RBP eCLIP16.43■□□□□ 0.22
EBF3-201ENST00000355311 BLOC1S2Q6QNY1 142 aa16.43■□□□□ 0.22
EBF3-201ENST00000355311 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.43■□□□□ 0.22
EBF3-201ENST00000355311 DYNC1I1O14576 645 aa16.42■□□□□ 0.22
EBF3-201ENST00000355311 NCOA5Q9HCD5 579 aaKnown RBP16.42■□□□□ 0.22
EBF3-201ENST00000355311 GPHNQ9NQX3 736 aaPredicted RBP16.42■□□□□ 0.22
EBF3-201ENST00000355311 MBD3O95983 291 aa16.42■□□□□ 0.22
EBF3-201ENST00000355311 PTPN12Q05209 780 aaKnown RBP16.42■□□□□ 0.22
EBF3-201ENST00000355311 XRN1Q8IZH2 1706 aaKnown RBP16.42■□□□□ 0.22
EBF3-201ENST00000355311 ALDH1L1O75891 902 aa16.41■□□□□ 0.22
EBF3-201ENST00000355311 LIG1P18858 919 aa16.41■□□□□ 0.22
EBF3-201ENST00000355311 TTLL5Q6EMB2 1281 aa16.41■□□□□ 0.22
EBF3-201ENST00000355311 PI16Q6UXB8 463 aa16.41■□□□□ 0.22
EBF3-201ENST00000355311 ZNF710Q8N1W2 664 aa16.41■□□□□ 0.22
EBF3-201ENST00000355311 LTN1O94822 1766 aa16.41■□□□□ 0.22
EBF3-201ENST00000355311 ATP2B3Q16720 1220 aa16.41■□□□□ 0.22
EBF3-201ENST00000355311 SASS6Q6UVJ0 657 aa16.41■□□□□ 0.22
EBF3-201ENST00000355311 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.41■□□□□ 0.22
EBF3-201ENST00000355311 IFNL2Q8IZJ0 200 aa16.41■□□□□ 0.22
EBF3-201ENST00000355311 BRF1Q92994 677 aa16.41■□□□□ 0.22
EBF3-201ENST00000355311 SYTL4Q96C24 671 aaPredicted RBP16.41■□□□□ 0.22
EBF3-201ENST00000355311 TTC41PQ6P2S7 1318 aa16.41■□□□□ 0.22
EBF3-201ENST00000355311 ADCY5O95622 1261 aa16.4■□□□□ 0.22
EBF3-201ENST00000355311 GPTP24298 496 aa16.4■□□□□ 0.22
EBF3-201ENST00000355311 METTL22Q9BUU2 404 aaPredicted RBP16.4■□□□□ 0.22
EBF3-201ENST00000355311 TERF1P54274 439 aa16.4■□□□□ 0.22
EBF3-201ENST00000355311 TTC6Q86TZ1 520 aa16.4■□□□□ 0.22
EBF3-201ENST00000355311 ZSWIM6Q9HCJ5 1215 aa16.4■□□□□ 0.22
EBF3-201ENST00000355311 BABAM1Q9NWV8 329 aa16.4■□□□□ 0.22
EBF3-201ENST00000355311 NBPF26B4DH59 902 aa16.39■□□□□ 0.21
EBF3-201ENST00000355311 AP5Z1O43299 807 aa16.39■□□□□ 0.21
EBF3-201ENST00000355311 TNNI3KQ59H18 835 aa16.39■□□□□ 0.21
EBF3-201ENST00000355311 NBPF14Q5TI25 921 aa16.39■□□□□ 0.21
EBF3-201ENST00000355311 OTUD7BQ6GQQ9 843 aa16.39■□□□□ 0.21
EBF3-201ENST00000355311 NBPF10Q6P3W6 841 aaKnown RBP16.39■□□□□ 0.21
EBF3-201ENST00000355311 ANKARQ7Z5J8 1434 aa16.39■□□□□ 0.21
EBF3-201ENST00000355311 NBPF15Q8N660 670 aa16.39■□□□□ 0.21
EBF3-201ENST00000355311 CCDC94Q9BW85 323 aaPredicted RBP16.39■□□□□ 0.21
EBF3-201ENST00000355311 C19orf44Q9H6X5 657 aa16.39■□□□□ 0.21
EBF3-201ENST00000355311 FPGT-TNNI3KV9GXZ4 949 aa16.39■□□□□ 0.21
EBF3-201ENST00000355311 SNRPA1P09661 255 aaKnown RBP16.39■□□□□ 0.21
EBF3-201ENST00000355311 Q6ZUG5 572 aa16.39■□□□□ 0.21
EBF3-201ENST00000355311 MAP4K1Q92918 833 aa16.39■□□□□ 0.21
EBF3-201ENST00000355311 COL15A1P39059 1388 aa16.38■□□□□ 0.21
EBF3-201ENST00000355311 PPP4R3BQ5MIZ7 849 aa16.38■□□□□ 0.21
EBF3-201ENST00000355311 ERC1Q8IUD2 1116 aa16.38■□□□□ 0.21
EBF3-201ENST00000355311 FAM89AQ96GI7 184 aa16.38■□□□□ 0.21
EBF3-201ENST00000355311 PRDM11Q9NQV5 511 aa16.38■□□□□ 0.21
EBF3-201ENST00000355311 GJB4Q9NTQ9 266 aa16.38■□□□□ 0.21
EBF3-201ENST00000355311 FAM208AQ9UK61 1670 aaKnown RBP16.38■□□□□ 0.21
EBF3-201ENST00000355311 GOLGA6L4A6NEF3 574 aa16.38■□□□□ 0.21
EBF3-201ENST00000355311 TOB2Q14106 344 aaPredicted RBP16.38■□□□□ 0.21
EBF3-201ENST00000355311 HOXB7P09629 217 aa16.38■□□□□ 0.21
EBF3-201ENST00000355311 DMTNQ08495 405 aa16.38■□□□□ 0.21
EBF3-201ENST00000355311 MAPK8IP2Q13387 824 aaPredicted RBP16.38■□□□□ 0.21
EBF3-201ENST00000355311 SNAP23O00161 211 aa16.37■□□□□ 0.21
EBF3-201ENST00000355311 APOBRQ0VD83 1088 aa16.37■□□□□ 0.21
EBF3-201ENST00000355311 ZBTB22O15209 634 aa16.37■□□□□ 0.21
EBF3-201ENST00000355311 TAF5LO75529 589 aa16.37■□□□□ 0.21
EBF3-201ENST00000355311 CYP21A2P08686 494 aa16.37■□□□□ 0.21
EBF3-201ENST00000355311 MTX1Q13505 466 aa16.37■□□□□ 0.21
EBF3-201ENST00000355311 LUZP1Q86V48 1076 aa16.37■□□□□ 0.21
EBF3-201ENST00000355311 SYAP1Q96A49 352 aaPredicted RBP16.37■□□□□ 0.21
EBF3-201ENST00000355311 AOX1Q06278 1338 aa16.36■□□□□ 0.21
EBF3-201ENST00000355311 FMNL2Q96PY5 1086 aa16.36■□□□□ 0.21
EBF3-201ENST00000355311 BBXQ8WY36 941 aaPredicted RBP16.36■□□□□ 0.21
EBF3-201ENST00000355311 DACT1Q9NYF0 836 aa16.36■□□□□ 0.21
EBF3-201ENST00000355311 KDM6AO15550 1401 aaPredicted RBP16.35■□□□□ 0.21
EBF3-201ENST00000355311 CSPP1Q1MSJ5 1256 aa16.35■□□□□ 0.21
EBF3-201ENST00000355311 HS1BP3Q53T59 392 aa16.35■□□□□ 0.21
EBF3-201ENST00000355311 CCDC183Q5T5S1 534 aa16.35■□□□□ 0.21
EBF3-201ENST00000355311 BICD2Q8TD16 824 aa16.35■□□□□ 0.21
EBF3-201ENST00000355311 CCDC39Q9UFE4 941 aa16.35■□□□□ 0.21
EBF3-201ENST00000355311 H3BQV1 296 aa16.35■□□□□ 0.21
EBF3-201ENST00000355311 ADORA1P30542 326 aa16.35■□□□□ 0.21
EBF3-201ENST00000355311 UBE2HP62256 183 aa16.35■□□□□ 0.21
EBF3-201ENST00000355311 WASHC4Q2M389 1173 aa16.35■□□□□ 0.21
EBF3-201ENST00000355311 GORABQ5T7V8 394 aa16.35■□□□□ 0.21
EBF3-201ENST00000355311 IFFO2Q5TF58 517 aa16.35■□□□□ 0.21
EBF3-201ENST00000355311 STOX1Q6ZVD7 989 aa16.35■□□□□ 0.21
EBF3-201ENST00000355311 TMEM94Q12767 1356 aa16.35■□□□□ 0.21
EBF3-201ENST00000355311 ADGRL3Q9HAR2 1447 aa16.34■□□□□ 0.21
EBF3-201ENST00000355311 MEGF6O75095 1541 aa16.34■□□□□ 0.21
EBF3-201ENST00000355311 DENND2AQ9ULE3 1009 aa16.34■□□□□ 0.21
EBF3-201ENST00000355311 NFAT5O94916 1531 aa16.34■□□□□ 0.21
EBF3-201ENST00000355311 RXRAP19793 462 aa16.34■□□□□ 0.21
EBF3-201ENST00000355311 RPS6KB1P23443 525 aa16.34■□□□□ 0.21
EBF3-201ENST00000355311 KIAA2012Q0VF49 1180 aa16.34■□□□□ 0.21
EBF3-201ENST00000355311 HELBQ8NG08 1087 aaPredicted RBP16.33■□□□□ 0.21
EBF3-201ENST00000355311 NEK1Q96PY6 1258 aa16.33■□□□□ 0.21
EBF3-201ENST00000355311 CHD2O14647 1828 aaKnown RBP16.33■□□□□ 0.2
EBF3-201ENST00000355311 MARF1Q9Y4F3 1742 aaKnown RBP16.33■□□□□ 0.2
EBF3-201ENST00000355311 RFX5P48382 616 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms