RNA–Protein interactions for RNA: ENST00000313050.11

SEC16A-203, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SEC16A, Length 8,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-203ENST00000313050 TERF1P54274 439 aa11.96□□□□□ -0.5
SEC16A-203ENST00000313050 GNAI1P63096 354 aa11.96□□□□□ -0.5
SEC16A-203ENST00000313050 RSPH3Q86UC2 560 aa11.95□□□□□ -0.5
SEC16A-203ENST00000313050 RRBP1Q9P2E9 1410 aaKnown RBP11.95□□□□□ -0.5
SEC16A-203ENST00000313050 USP47Q96K76 1375 aa11.95□□□□□ -0.5
SEC16A-203ENST00000313050 MTIF2P46199 727 aaKnown RBP11.95□□□□□ -0.5
SEC16A-203ENST00000313050 KANK3Q6NY19 840 aa11.95□□□□□ -0.5
SEC16A-203ENST00000313050 NCAPGQ9BPX3 1015 aa11.95□□□□□ -0.5
SEC16A-203ENST00000313050 YY1AP1Q9H869 796 aa11.95□□□□□ -0.5
SEC16A-203ENST00000313050 TXNDC16Q9P2K2 825 aa11.95□□□□□ -0.5
SEC16A-203ENST00000313050 MX2P20592 715 aa11.95□□□□□ -0.5
SEC16A-203ENST00000313050 FOXD1Q16676 465 aa11.95□□□□□ -0.5
SEC16A-203ENST00000313050 CERS3Q8IU89 383 aa11.95□□□□□ -0.5
SEC16A-203ENST00000313050 ERO1AQ96HE7 468 aa11.95□□□□□ -0.5
SEC16A-203ENST00000313050 MPHOSPH9Q99550 1183 aa11.95□□□□□ -0.5
SEC16A-203ENST00000313050 NACAP1Q9BZK3 213 aa11.95□□□□□ -0.5
SEC16A-203ENST00000313050 SH2B1Q9NRF2 756 aaPredicted RBP11.95□□□□□ -0.5
SEC16A-203ENST00000313050 GNAI3P08754 354 aa11.95□□□□□ -0.5
SEC16A-203ENST00000313050 TBC1D5Q92609 795 aa11.95□□□□□ -0.5
SEC16A-203ENST00000313050 AKAP2Q9Y2D5 859 aa11.95□□□□□ -0.5
SEC16A-203ENST00000313050 MYO1BO43795 1136 aa11.94□□□□□ -0.5
SEC16A-203ENST00000313050 POLE3Q9NRF9 147 aa11.94□□□□□ -0.5
SEC16A-203ENST00000313050 CCDC7Q96M83 1385 aa11.94□□□□□ -0.5
SEC16A-203ENST00000313050 GSTA5Q7RTV2 222 aa11.94□□□□□ -0.5
SEC16A-203ENST00000313050 N4BP2L2Q92802 583 aaPredicted RBP11.94□□□□□ -0.5
SEC16A-203ENST00000313050 CABS1Q96KC9 395 aa11.94□□□□□ -0.5
SEC16A-203ENST00000313050 PYM1Q9BRP8 204 aaKnown RBP11.94□□□□□ -0.5
SEC16A-203ENST00000313050 U2AF2P26368 475 aaKnown RBP eCLIP11.94□□□□□ -0.52e-7■□□□□ 9.8
SEC16A-203ENST00000313050 NUCB1Q02818 461 aa11.94□□□□□ -0.5
SEC16A-203ENST00000313050 IFT81Q8WYA0 676 aa11.94□□□□□ -0.5
SEC16A-203ENST00000313050 CREB3O43889 395 aa11.94□□□□□ -0.5
SEC16A-203ENST00000313050 FCHSD2O94868 740 aa11.94□□□□□ -0.5
SEC16A-203ENST00000313050 HSPA1LP34931 641 aa11.94□□□□□ -0.5
SEC16A-203ENST00000313050 WDR78Q5VTH9 848 aa11.94□□□□□ -0.5
SEC16A-203ENST00000313050 CENPKQ9BS16 269 aa11.94□□□□□ -0.5
SEC16A-203ENST00000313050 MLECQ14165 292 aa11.94□□□□□ -0.5
SEC16A-203ENST00000313050 JAKMIP1Q96N16 626 aaKnown RBP11.94□□□□□ -0.5
SEC16A-203ENST00000313050 ZNF830Q96NB3 372 aaPredicted RBP11.94□□□□□ -0.5
SEC16A-203ENST00000313050 MRPL46Q9H2W6 279 aaKnown RBP11.94□□□□□ -0.5
SEC16A-203ENST00000313050 RHOXF2BP0C7M4 288 aa11.94□□□□□ -0.5
SEC16A-203ENST00000313050 RHOXF2Q9BQY4 288 aa11.94□□□□□ -0.5
SEC16A-203ENST00000313050 RAB34Q9BZG1 259 aa11.94□□□□□ -0.5
SEC16A-203ENST00000313050 PSMD7P51665 324 aa11.93□□□□□ -0.5
SEC16A-203ENST00000313050 PPP2R3AQ06190 1150 aa11.93□□□□□ -0.5
SEC16A-203ENST00000313050 NECTIN2Q92692 538 aa11.93□□□□□ -0.5
SEC16A-203ENST00000313050 TRIM60Q495X7 471 aa11.93□□□□□ -0.5
SEC16A-203ENST00000313050 SNX16P57768 344 aa11.93□□□□□ -0.5
SEC16A-203ENST00000313050 MYRIPQ8NFW9 859 aa11.93□□□□□ -0.5
SEC16A-203ENST00000313050 TACO1Q9BSH4 297 aaKnown RBP11.93□□□□□ -0.5
SEC16A-203ENST00000313050 KRT83P78385 493 aa11.93□□□□□ -0.5
SEC16A-203ENST00000313050 GJC2Q5T442 439 aaPredicted RBP11.93□□□□□ -0.5
SEC16A-203ENST00000313050 NUDCD3Q8IVD9 361 aa11.93□□□□□ -0.5
SEC16A-203ENST00000313050 LMBR1Q8WVP7 490 aa11.93□□□□□ -0.5
SEC16A-203ENST00000313050 HAUS8Q9BT25 410 aa11.93□□□□□ -0.5
SEC16A-203ENST00000313050 XRCC6P12956 609 aaKnown RBP eCLIP11.93□□□□□ -0.54e-7■□□□□ 8.4
SEC16A-203ENST00000313050 SYT1P21579 422 aa11.93□□□□□ -0.5
SEC16A-203ENST00000313050 GOLGA5Q8TBA6 731 aa11.93□□□□□ -0.5
SEC16A-203ENST00000313050 HAUS1Q96CS2 278 aa11.93□□□□□ -0.5
SEC16A-203ENST00000313050 CCDC68Q9H2F9 335 aa11.93□□□□□ -0.5
SEC16A-203ENST00000313050 STK38LQ9Y2H1 464 aa11.93□□□□□ -0.5
SEC16A-203ENST00000313050 DAAM1Q9Y4D1 1078 aa11.93□□□□□ -0.5
SEC16A-203ENST00000313050 ZRANB2O95218 330 aaKnown RBP eCLIP11.93□□□□□ -0.53e-7■■□□□ 14
SEC16A-203ENST00000313050 GNAI2P04899 355 aa11.93□□□□□ -0.5
SEC16A-203ENST00000313050 PSMD6Q15008 389 aa11.93□□□□□ -0.5
SEC16A-203ENST00000313050 ARMC9Q7Z3E5 817 aa11.93□□□□□ -0.5
SEC16A-203ENST00000313050 USP37Q86T82 979 aa11.93□□□□□ -0.5
SEC16A-203ENST00000313050 PHEXP78562 749 aa11.93□□□□□ -0.5
SEC16A-203ENST00000313050 CHD1LQ86WJ1 897 aa11.93□□□□□ -0.5
SEC16A-203ENST00000313050 RPGRIP1LQ68CZ1 1315 aa11.92□□□□□ -0.5
SEC16A-203ENST00000313050 WASHC2CQ9Y4E1 1318 aa11.92□□□□□ -0.5
SEC16A-203ENST00000313050 APOEP02649 317 aa11.92□□□□□ -0.5
SEC16A-203ENST00000313050 DRC3Q9H069 523 aa11.92□□□□□ -0.5
SEC16A-203ENST00000313050 PLCB1Q9NQ66 1216 aa11.92□□□□□ -0.5
SEC16A-203ENST00000313050 BRD4O60885 1362 aaPredicted RBP11.92□□□□□ -0.5
SEC16A-203ENST00000313050 EIF4G1Q04637 1599 aaKnown RBP11.92□□□□□ -0.5
SEC16A-203ENST00000313050 TUBB2AQ13885 445 aa11.92□□□□□ -0.5
SEC16A-203ENST00000313050 TUBB2BQ9BVA1 445 aa11.92□□□□□ -0.5
SEC16A-203ENST00000313050 DUSP27Q5VZP5 1158 aa11.92□□□□□ -0.5
SEC16A-203ENST00000313050 VSIG1Q86XK7 387 aa11.92□□□□□ -0.5
SEC16A-203ENST00000313050 GPR161Q8N6U8 529 aaKnown RBP11.92□□□□□ -0.5
SEC16A-203ENST00000313050 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.92□□□□□ -0.5
SEC16A-203ENST00000313050 KIF27Q86VH2 1401 aa11.92□□□□□ -0.5
SEC16A-203ENST00000313050 AFAP1L2Q8N4X5 818 aa11.92□□□□□ -0.5
SEC16A-203ENST00000313050 CNTLNQ9NXG0 1405 aa11.92□□□□□ -0.5
SEC16A-203ENST00000313050 SH3BP5O60239 455 aa11.91□□□□□ -0.5
SEC16A-203ENST00000313050 HCLS1P14317 486 aaPredicted RBP11.91□□□□□ -0.5
SEC16A-203ENST00000313050 TSC22D3Q99576 134 aa11.91□□□□□ -0.5
SEC16A-203ENST00000313050 UACAQ9BZF9 1416 aa11.91□□□□□ -0.5
SEC16A-203ENST00000313050 PALM3A6NDB9 673 aaPredicted RBP11.91□□□□□ -0.5
SEC16A-203ENST00000313050 GOLGA6BA6NDN3 693 aa11.91□□□□□ -0.5
SEC16A-203ENST00000313050 ARHGEF9O43307 516 aa11.91□□□□□ -0.5
SEC16A-203ENST00000313050 PPM1FP49593 454 aaPredicted RBP11.91□□□□□ -0.5
SEC16A-203ENST00000313050 BIRC2Q13490 618 aa11.91□□□□□ -0.5
SEC16A-203ENST00000313050 HELBQ8NG08 1087 aaPredicted RBP11.91□□□□□ -0.5
SEC16A-203ENST00000313050 PAIP2BQ9ULR5 123 aaKnown RBP11.91□□□□□ -0.5
SEC16A-203ENST00000313050 PPP1R12AO14974 1030 aaPredicted RBP11.91□□□□□ -0.5
SEC16A-203ENST00000313050 SURF6O75683 361 aaKnown RBP11.91□□□□□ -0.5
SEC16A-203ENST00000313050 LMNB2Q03252 620 aa11.91□□□□□ -0.5
SEC16A-203ENST00000313050 RUFY4Q6ZNE9 571 aa11.91□□□□□ -0.5
SEC16A-203ENST00000313050 SH3GL3Q99963 347 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms