RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 PCDH11XQ9BZA7 1347 aa10.89□□□□□ -0.67
CKAP2-201ENST00000258607 PCDH11YQ9BZA8 1340 aa10.89□□□□□ -0.67
CKAP2-201ENST00000258607 ANKRD26Q9UPS8 1709 aa10.89□□□□□ -0.67
CKAP2-201ENST00000258607 STARD3NLO95772 234 aa10.89□□□□□ -0.67
CKAP2-201ENST00000258607 GJB2P29033 226 aa10.89□□□□□ -0.67
CKAP2-201ENST00000258607 NCBP3Q53F19 620 aaKnown RBP10.89□□□□□ -0.67
CKAP2-201ENST00000258607 RUFY2Q8WXA3 655 aa10.89□□□□□ -0.67
CKAP2-201ENST00000258607 ANO8Q9HCE9 1232 aaPredicted RBP10.89□□□□□ -0.67
CKAP2-201ENST00000258607 BLOC1S2Q6QNY1 142 aa10.89□□□□□ -0.67
CKAP2-201ENST00000258607 NAP1L5Q96NT1 182 aaPredicted RBP10.89□□□□□ -0.67
CKAP2-201ENST00000258607 DENND2AQ9ULE3 1009 aa10.89□□□□□ -0.67
CKAP2-201ENST00000258607 ALDH1L1O75891 902 aa10.88□□□□□ -0.67
CKAP2-201ENST00000258607 DNM1Q05193 864 aaKnown RBP10.88□□□□□ -0.67
CKAP2-201ENST00000258607 CHAF1AQ13111 956 aaPredicted RBP10.88□□□□□ -0.67
CKAP2-201ENST00000258607 RAB3GAP1Q15042 981 aa10.88□□□□□ -0.67
CKAP2-201ENST00000258607 ZKSCAN3Q9BRR0 538 aa10.88□□□□□ -0.67
CKAP2-201ENST00000258607 MST1RQ04912 1400 aa10.88□□□□□ -0.67
CKAP2-201ENST00000258607 GOLGA6L4A6NEF3 574 aa10.88□□□□□ -0.67
CKAP2-201ENST00000258607 CREB3L3Q68CJ9 461 aa10.88□□□□□ -0.67
CKAP2-201ENST00000258607 RUFY3Q7L099 469 aa10.88□□□□□ -0.67
CKAP2-201ENST00000258607 ANP32BQ92688 251 aaKnown RBP10.88□□□□□ -0.67
CKAP2-201ENST00000258607 NIP7Q9Y221 180 aaKnown RBP eCLIP10.88□□□□□ -0.67
CKAP2-201ENST00000258607 ITGA6P23229 1130 aa10.88□□□□□ -0.67
CKAP2-201ENST00000258607 PLBD2Q8NHP8 589 aa10.88□□□□□ -0.67
CKAP2-201ENST00000258607 MPHOSPH8Q99549 860 aa10.88□□□□□ -0.67
CKAP2-201ENST00000258607 MYL10Q9BUA6 226 aa10.88□□□□□ -0.67
CKAP2-201ENST00000258607 ATG3Q9NT62 314 aa10.88□□□□□ -0.67
CKAP2-201ENST00000258607 IRS4O14654 1257 aaPredicted RBP10.87□□□□□ -0.67
CKAP2-201ENST00000258607 ZAP70P43403 619 aa10.87□□□□□ -0.67
CKAP2-201ENST00000258607 POLA2Q14181 598 aa10.87□□□□□ -0.67
CKAP2-201ENST00000258607 LARP1BQ659C4 914 aaKnown RBP10.87□□□□□ -0.67
CKAP2-201ENST00000258607 GRPEL1Q9HAV7 217 aa10.87□□□□□ -0.67
CKAP2-201ENST00000258607 ZDHHC9Q9Y397 364 aa10.87□□□□□ -0.67
CKAP2-201ENST00000258607 H3BQV1 296 aa10.87□□□□□ -0.67
CKAP2-201ENST00000258607 APOBRQ0VD83 1088 aa10.87□□□□□ -0.67
CKAP2-201ENST00000258607 IFFO2Q5TF58 517 aa10.87□□□□□ -0.67
CKAP2-201ENST00000258607 GPR101Q96P66 508 aaPredicted RBP10.87□□□□□ -0.67
CKAP2-201ENST00000258607 FTOQ9C0B1 505 aaKnown RBP eCLIP10.87□□□□□ -0.67
CKAP2-201ENST00000258607 AKAP12Q02952 1782 aa10.87□□□□□ -0.67
CKAP2-201ENST00000258607 ERC1Q8IUD2 1116 aa10.86□□□□□ -0.67
CKAP2-201ENST00000258607 CKAP2LQ8IYA6 745 aa10.86□□□□□ -0.67
CKAP2-201ENST00000258607 CMTR1Q8N1G2 835 aaKnown RBP10.86□□□□□ -0.67
CKAP2-201ENST00000258607 EVI5LQ96CN4 794 aa10.86□□□□□ -0.67
CKAP2-201ENST00000258607 ISY1Q9ULR0 285 aaKnown RBP10.86□□□□□ -0.67
CKAP2-201ENST00000258607 ME3Q16798 604 aa10.86□□□□□ -0.67
CKAP2-201ENST00000258607 VPS37DQ86XT2 251 aa10.86□□□□□ -0.67
CKAP2-201ENST00000258607 FAM184AQ8NB25 1140 aa10.86□□□□□ -0.67
CKAP2-201ENST00000258607 SLC4A9Q96Q91 983 aa10.86□□□□□ -0.67
CKAP2-201ENST00000258607 LSG1Q9H089 658 aaKnown RBP10.86□□□□□ -0.67
CKAP2-201ENST00000258607 BAZ2BQ9UIF8 2168 aaKnown RBP10.86□□□□□ -0.67
CKAP2-201ENST00000258607 ZNF830Q96NB3 372 aaPredicted RBP10.86□□□□□ -0.67
CKAP2-201ENST00000258607 SRP68Q9UHB9 627 aaKnown RBP10.86□□□□□ -0.67
CKAP2-201ENST00000258607 LTN1O94822 1766 aa10.85□□□□□ -0.67
CKAP2-201ENST00000258607 NUCB2P80303 420 aa10.85□□□□□ -0.67
CKAP2-201ENST00000258607 SNX21Q969T3 373 aa10.85□□□□□ -0.67
CKAP2-201ENST00000258607 TPCN1Q9ULQ1 816 aa10.85□□□□□ -0.67
CKAP2-201ENST00000258607 RGPD5Q99666 1765 aa10.85□□□□□ -0.67
CKAP2-201ENST00000258607 CCDC171Q6TFL3 1326 aa10.85□□□□□ -0.67
CKAP2-201ENST00000258607 TNS3Q68CZ2 1445 aa10.85□□□□□ -0.67
CKAP2-201ENST00000258607 hCG_1642624A0A1W2PR95 340 aa10.85□□□□□ -0.67
CKAP2-201ENST00000258607 ISM2Q6H9L7 571 aa10.85□□□□□ -0.67
CKAP2-201ENST00000258607 GIMAP6Q6P9H5 292 aa10.85□□□□□ -0.67
CKAP2-201ENST00000258607 PAG1Q9NWQ8 432 aa10.85□□□□□ -0.67
CKAP2-201ENST00000258607 SLC27A2O14975 620 aa10.85□□□□□ -0.67
CKAP2-201ENST00000258607 SYT1P21579 422 aa10.85□□□□□ -0.67
CKAP2-201ENST00000258607 NASPP49321 788 aaPredicted RBP10.85□□□□□ -0.67
CKAP2-201ENST00000258607 Q6ZUG5 572 aa10.85□□□□□ -0.67
CKAP2-201ENST00000258607 XAGE2Q96GT9 111 aa10.85□□□□□ -0.67
CKAP2-201ENST00000258607 MINDY4BA8MYZ0 360 aa10.84□□□□□ -0.67
CKAP2-201ENST00000258607 TULP1O00294 542 aaPredicted RBP10.84□□□□□ -0.67
CKAP2-201ENST00000258607 POLR3DP05423 398 aaPredicted RBP10.84□□□□□ -0.67
CKAP2-201ENST00000258607 CCDC158Q5M9N0 1113 aa10.84□□□□□ -0.67
CKAP2-201ENST00000258607 USP48Q86UV5 1035 aa10.84□□□□□ -0.67
CKAP2-201ENST00000258607 SLC9C2Q5TAH2 1124 aa10.84□□□□□ -0.67
CKAP2-201ENST00000258607 GPT2Q8TD30 523 aa10.84□□□□□ -0.67
CKAP2-201ENST00000258607 TMEM63CQ9P1W3 806 aa10.84□□□□□ -0.67
CKAP2-201ENST00000258607 RAD50Q92878 1312 aa10.84□□□□□ -0.67
CKAP2-201ENST00000258607 SMIM22K7EJ46 135 aa10.83□□□□□ -0.67
CKAP2-201ENST00000258607 RAD21O60216 631 aa10.83□□□□□ -0.67
CKAP2-201ENST00000258607 PRDM1O75626 825 aa10.83□□□□□ -0.67
CKAP2-201ENST00000258607 HSPA4P34932 840 aa10.83□□□□□ -0.67
CKAP2-201ENST00000258607 PHKA1P46020 1223 aa10.83□□□□□ -0.67
CKAP2-201ENST00000258607 ATP2B3Q16720 1220 aa10.83□□□□□ -0.67
CKAP2-201ENST00000258607 SPC24Q8NBT2 197 aa10.83□□□□□ -0.67
CKAP2-201ENST00000258607 CARD10Q9BWT7 1032 aa10.83□□□□□ -0.67
CKAP2-201ENST00000258607 CHMP4AQ9BY43 222 aa10.83□□□□□ -0.67
CKAP2-201ENST00000258607 TFCP2L1Q9NZI6 479 aa10.83□□□□□ -0.67
CKAP2-201ENST00000258607 LIMCH1Q9UPQ0 1083 aa10.83□□□□□ -0.67
CKAP2-201ENST00000258607 HEG1Q9ULI3 1381 aa10.83□□□□□ -0.68
CKAP2-201ENST00000258607 CDC37L1Q7L3B6 337 aa10.83□□□□□ -0.68
CKAP2-201ENST00000258607 BICD2Q8TD16 824 aa10.83□□□□□ -0.68
CKAP2-201ENST00000258607 NWD1Q149M9 1564 aa10.83□□□□□ -0.68
CKAP2-201ENST00000258607 EYA2O00167 538 aa10.82□□□□□ -0.68
CKAP2-201ENST00000258607 ZSCAN23Q3MJ62 389 aa10.82□□□□□ -0.68
CKAP2-201ENST00000258607 NFXL1Q6ZNB6 911 aa10.82□□□□□ -0.68
CKAP2-201ENST00000258607 MICU3Q86XE3 530 aa10.82□□□□□ -0.68
CKAP2-201ENST00000258607 HDAC5Q9UQL6 1122 aa10.82□□□□□ -0.68
CKAP2-201ENST00000258607 STX6O43752 255 aa10.82□□□□□ -0.68
CKAP2-201ENST00000258607 CYP21A2P08686 494 aa10.82□□□□□ -0.68
CKAP2-201ENST00000258607 HOXB7P09629 217 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms