RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Ints5Q8CHT3 1018 aa18.59■□□□□ 0.57
Sdc1-205ENSMUST00000171158 Anp32cQ64G17 123 aa18.58■□□□□ 0.57
Sdc1-205ENSMUST00000171158 Atp8b3Q6UQ17 1335 aa18.58■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Ddx46Q569Z5 1032 aaKnown RBP18.58■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Pnma3Q8JZW8 466 aa18.58■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Cep57l1Q8VDS7 400 aa18.58■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Spata31d1bE9QA57 1361 aa18.58■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Ctdnep1Q3TP92 244 aa18.57■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Esyt1Q3U7R1 1092 aaKnown RBP18.57■□□□□ 0.56
Sdc1-205ENSMUST00000171158 NfkbibQ60778 359 aa18.57■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Atg9aQ68FE2 551 aa18.57■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Nap1l3Q794H2 544 aa18.57■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Scn4aQ9ER60 1841 aa18.57■□□□□ 0.56
Sdc1-205ENSMUST00000171158 AK157302I3ITR1 129 aa18.57■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Me3Q8BMF3 604 aa18.57■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Mb21d2Q8C525 428 aa18.57■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Tmc2Q8R4P4 888 aa18.57■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Tubb6Q922F4 447 aa18.57■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Isca1Q9D924 129 aa18.57■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Zbtb22Q9Z0G7 638 aa18.57■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Lrrfip2Q91WK0 415 aa18.56■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Cwc25Q9DBF7 416 aa18.56■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Txnrd1Q9JMH6 613 aa18.56■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Gm21680A0A0G2JGR8 267 aa18.56■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Mcm3P25206 812 aaKnown RBP18.56■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Tpm2P58774 284 aa18.56■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Ppp1r10Q80W00 888 aaKnown RBP18.56■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Shank3Q4ACU6 1730 aa18.56■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Brwd3A2AHJ4 1799 aa18.55■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Stat1P42225 749 aa18.55■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Mindy4Q3UQI9 744 aa18.55■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Usp44Q8C2S0 711 aa18.55■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Rrs1Q9CYH6 365 aaKnown RBP18.55■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Stard3nlQ9DCI3 235 aa18.55■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Ltb4r2Q9JJL9 360 aa18.55■□□□□ 0.56
Sdc1-205ENSMUST00000171158 PdcQ9QW08 244 aa18.55■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Irgm2A0A140LIF8 407 aa18.55■□□□□ 0.56
Sdc1-205ENSMUST00000171158 NpeppsQ11011 920 aa18.55■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Cnnm3Q32NY4 713 aa18.55■□□□□ 0.56
Sdc1-205ENSMUST00000171158 ZyxQ62523 564 aa18.55■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Fam102bQ8BQS4 339 aa18.55■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Ehd4Q9EQP2 541 aa18.55■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Prl3d2F6R3P9 224 aa18.54■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Cfap73J3QPZ5 306 aa18.54■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Ccdc129Q14B48 1034 aa18.54■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Erc1Q99MI1 1120 aa18.54■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Sos2Q02384 1333 aa18.53■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Gzf1Q4VBD9 706 aa18.53■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Ptcd1Q8C2E4 695 aaKnown RBP18.53■□□□□ 0.56
Sdc1-205ENSMUST00000171158 ZwintQ9CQU5 252 aa18.53■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Pus3Q9JI38 481 aa18.53■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Sipa1l3G3X9J0 1776 aa18.53■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Adcy5P84309 1262 aa18.52■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Cadps2Q8BYR5 1297 aa18.52■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Ndufa8Q9DCJ5 172 aa18.52■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Myd88P22366 296 aa18.52■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Cyp2d10P24456 504 aa18.52■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Timm10P62073 90 aa18.52■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Bach2P97303 839 aa18.52■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Golim4Q8BXA1 655 aa18.52■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Plcd1Q8R3B1 756 aa18.52■□□□□ 0.56
Sdc1-205ENSMUST00000171158 Prl7a2O54831 253 aa18.51■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Mknk2Q8CDB0 459 aa18.51■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Add3Q9QYB5 706 aaKnown RBP18.51■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Wdr33Q8K4P0 1330 aaKnown RBP18.51■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Klhl34A2AI76 644 aa18.51■□□□□ 0.55
Sdc1-205ENSMUST00000171158 AbraQ8BUZ1 375 aa18.51■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Tnrc6cQ3UHC0 1690 aaKnown RBP18.5■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Eya2O08575 532 aa18.5■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Znf692Q3U381 531 aa18.5■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Utp3Q9JI13 469 aaKnown RBP18.5■□□□□ 0.55
Sdc1-205ENSMUST00000171158 CgnP59242 1191 aa18.5■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Ccdc162pQ0VG85 912 aa18.5■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Slx1bQ8BX32 270 aa18.5■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Smc4Q8CG47 1286 aa18.5■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Krt25Q8VCW2 446 aa18.5■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Npc1l1Q6T3U4 1333 aa18.5■□□□□ 0.55
Sdc1-205ENSMUST00000171158 PappaQ8R4K8 1624 aa18.49■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Usp25P57080 1055 aa18.49■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Ano1Q8BHY3 960 aa18.49■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Ccdc158Q8CDI6 1109 aa18.49■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Iffo2Q8R2V2 512 aa18.49■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Srgap1Q91Z69 1062 aa18.49■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Chmp3Q9CQ10 224 aa18.49■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Fam213aQ9CYH2 218 aa18.49■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Krt85Q9Z2T6 507 aa18.49■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Tbc1d31Q6NXY1 996 aa18.49■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Snx13Q6PHS6 957 aa18.49■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Gsdma2Q32M21 443 aa18.48■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Hvcn1Q3U2S8 269 aa18.48■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Ubash3aQ3V3E1 624 aa18.48■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Asap2Q7SIG6 958 aa18.48■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Rassf8Q8CJ96 419 aa18.48■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Ciao1Q99KN2 339 aa18.48■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Mx2Q9WVP9 655 aa18.48■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Ltbp4Q8K4G1 1666 aa18.48■□□□□ 0.55
Sdc1-205ENSMUST00000171158 HdgfP51859 237 aaKnown RBP18.48■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Smarcc2Q6PDG5 1213 aa18.48■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Tmem266Q8BZB3 538 aa18.48■□□□□ 0.55
Sdc1-205ENSMUST00000171158 Lmbrd2Q8C561 694 aa18.48■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms