RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Ercc3P49135 783 aa13.44□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Nkx2-3P97334 362 aa13.44□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Lrriq3Q14DL3 633 aa13.44□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 CoilQ5SU73 570 aa13.44□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Atp1a3Q6PIC6 1013 aa13.44□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Hmgn5Q9JL35 406 aa13.44□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Q3UJC8 639 aa13.44□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Usp28Q5I043 1051 aa13.44□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Map3k2Q61083 619 aa13.44□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Ttc27Q8CD92 847 aa13.44□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Igsf1Q7TQA1 1317 aa13.44□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Tet3Q8BG87 1668 aa13.43□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Gemin5Q8BX17 1502 aaKnown RBP13.43□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Lrrc8aQ80WG5 810 aa13.43□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Ccdc38Q8CDN8 563 aa13.43□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Iqca1Q9CUL5 857 aa13.43□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Idi1P58044 227 aa13.43□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Zfp317Q8C0Q5 607 aa13.43□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Ddx41Q91VN6 622 aaKnown RBP13.43□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Cep57l1Q8VDS7 400 aa13.42□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Kif1aP33173 1695 aa13.42□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Znf526Q8BI66 675 aa13.42□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Hook1Q8BIL5 728 aa13.42□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Phf20l1Q8CCJ9 1013 aa13.42□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Cdk12Q14AX6 1484 aaKnown RBP13.42□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Lcmt1A0A0U1RNF2 332 aa13.42□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Neurod6P48986 337 aa13.42□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Cct2P80314 535 aaKnown RBP13.42□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Rassf8Q8CJ96 419 aa13.42□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Frmpd2A0A140LI67 1392 aa13.41□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Astn2Q80Z10 1352 aa13.41□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 PplQ9R269 1755 aa13.41□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Hspa2P17156 633 aa13.41□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Samsn1P57725 372 aa13.41□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Gabpb2P81069 414 aa13.41□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Rps6kb1Q8BSK8 525 aa13.41□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Atf7Q8R0S1 413 aa13.41□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Bag3Q9JLV1 577 aaKnown RBP13.41□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Alpk3Q924C5 1678 aa13.41□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Aox4Q3TYQ9 1336 aa13.41□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Atp2b1G5E829 1220 aa13.41□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Morc2aQ69ZX6 1030 aa13.41□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Dnaaf2Q8BPI1 814 aa13.41□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Frat2Q8K025 231 aa13.41□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Golph3lQ8R088 285 aaKnown RBP13.41□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Kcnk13Q8R1P5 405 aa13.41□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Srgap1Q91Z69 1062 aa13.41□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Elf2Q9JHC9 593 aa13.41□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Hoxc9P09633 260 aa13.4□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Eif4a1P60843 406 aaKnown RBP13.4□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Ubxn10Q8BG34 277 aa13.4□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Bicc1Q99MQ1 977 aaKnown RBP13.4□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Cfap58B2RW38 873 aa13.4□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Bin1O08539 588 aaKnown RBP13.4□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Otud6bQ8K2H2 294 aa13.4□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Myo5bP21271 1818 aa13.4□□□□□ -0.26
Prpf40b-208ENSMUST00000136980 Serpinb6bO08804 377 aa13.39□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Arglu1Q3UL36 271 aaKnown RBP13.39□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Slu7Q8BHJ9 585 aa13.39□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Slc35g1Q8BY79 368 aa13.39□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Osbpl5Q9ER64 874 aa13.39□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Pus3Q9JI38 481 aa13.39□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Zkscan5Q9Z1D8 819 aa13.39□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Tbc1d4Q8BYJ6 1307 aa13.39□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Zfp597E9Q6S0 419 aa13.39□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Csrnp1P59054 583 aa13.39□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 GscQ02591 256 aa13.39□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Rassf4Q8CB96 322 aa13.39□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 C1qtnf12Q8R2Z0 308 aa13.39□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Dusp10Q9ESS0 483 aa13.39□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Psma5Q9Z2U1 241 aaKnown RBP13.39□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Adcy9P51830 1353 aa13.39□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Mst1rQ62190 1378 aa13.39□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Itsn1Q9Z0R4 1714 aa13.39□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Ddx27Q921N6 760 aaKnown RBP13.39□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Pik3c2bE9QAN8 1632 aa13.38□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 1700006A11RikB9EHI3 544 aa13.38□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Stat1P42225 749 aa13.38□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Echdc1Q9D9V3 322 aa13.38□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 MycbpQ9EQS3 103 aa13.38□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Aox1O54754 1333 aa13.38□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Cnksr1A2A9K7 700 aa13.38□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Btbd11Q6GQW0 1109 aa13.38□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Znf532Q6NXK2 1036 aa13.38□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Larp1Q6ZQ58 1072 aaKnown RBP13.38□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Cps1Q8C196 1500 aa13.38□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Klhl34A2AI76 644 aa13.37□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Znf568E9PYI1 671 aa13.37□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Ccdc155Q80VJ8 648 aa13.37□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Dhx38Q80X98 1228 aa13.37□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Fam84aQ9D650 292 aa13.37□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Abcc4E9Q236 1325 aa13.37□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Atp8b3Q6UQ17 1335 aa13.37□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Irgm2A0A140LIF8 407 aa13.37□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Igfbp6P47880 238 aa13.37□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Zkscan4Q5SZT6 480 aa13.37□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Ano10Q8BH79 659 aa13.37□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Pcdhgc5Q91XW9 944 aa13.37□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 LratQ9JI60 231 aa13.37□□□□□ -0.27
Prpf40b-208ENSMUST00000136980 Rnf20Q5DTM8 973 aa13.37□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms