RNA–Protein interactions for RNA: ENSMUST00000103059.1

Col9a3-201, Transcript of Collagen, type IX, alpha 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col9a3, Length 2,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3-201ENSMUST00000103059 Wnk3Q80XP9 1757 aa15.68■□□□□ 0.1
Col9a3-201ENSMUST00000103059 Trim30aP15533 496 aa15.67■□□□□ 0.1
Col9a3-201ENSMUST00000103059 Ddx46Q569Z5 1032 aaKnown RBP15.67■□□□□ 0.1
Col9a3-201ENSMUST00000103059 Ccar2Q8VDP4 922 aaKnown RBP15.67■□□□□ 0.1
Col9a3-201ENSMUST00000103059 Mrpl50Q8VDT9 159 aaKnown RBP15.67■□□□□ 0.1
Col9a3-201ENSMUST00000103059 Rrs1Q9CYH6 365 aaKnown RBP15.67■□□□□ 0.1
Col9a3-201ENSMUST00000103059 Casc1Q6TDU8 730 aa15.67■□□□□ 0.1
Col9a3-201ENSMUST00000103059 Tsr2Q8C8T8 191 aa15.67■□□□□ 0.1
Col9a3-201ENSMUST00000103059 SrrtQ99MR6 875 aaKnown RBP15.67■□□□□ 0.1
Col9a3-201ENSMUST00000103059 Col18a1P39061 1774 aa15.67■□□□□ 0.1
Col9a3-201ENSMUST00000103059 Rnf20Q5DTM8 973 aa15.67■□□□□ 0.1
Col9a3-201ENSMUST00000103059 Zbtb40Q6PCS8 1258 aa15.67■□□□□ 0.1
Col9a3-201ENSMUST00000103059 Nxf2Q4ZGD8 691 aa15.66■□□□□ 0.1
Col9a3-201ENSMUST00000103059 Kiaa0754Q69ZZ9 979 aa15.66■□□□□ 0.1
Col9a3-201ENSMUST00000103059 Ubxn10Q8BG34 277 aa15.66■□□□□ 0.1
Col9a3-201ENSMUST00000103059 Stard3nlQ9DCI3 235 aa15.66■□□□□ 0.1
Col9a3-201ENSMUST00000103059 Ddx60E9PZQ1 1711 aa15.66■□□□□ 0.1
Col9a3-201ENSMUST00000103059 Ints5Q8CHT3 1018 aa15.66■□□□□ 0.1
Col9a3-201ENSMUST00000103059 Atf7Q8R0S1 413 aa15.66■□□□□ 0.1
Col9a3-201ENSMUST00000103059 Gpatch11Q3UFS4 262 aa15.65■□□□□ 0.1
Col9a3-201ENSMUST00000103059 Psma5Q9Z2U1 241 aaKnown RBP15.65■□□□□ 0.1
Col9a3-201ENSMUST00000103059 Slit1Q80TR4 1531 aa15.65■□□□□ 0.1
Col9a3-201ENSMUST00000103059 Timm10P62073 90 aa15.65■□□□□ 0.1
Col9a3-201ENSMUST00000103059 Cers3Q1A3B0 383 aa15.65■□□□□ 0.1
Col9a3-201ENSMUST00000103059 Dmrt2Q8BG36 561 aa15.65■□□□□ 0.1
Col9a3-201ENSMUST00000103059 Rassf8Q8CJ96 419 aa15.64■□□□□ 0.09
Col9a3-201ENSMUST00000103059 AceP09470 1312 aa15.64■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Kcnb2A6H8H5 907 aa15.64■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Nucb2P81117 420 aa15.64■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Samm50Q8BGH2 469 aa15.64■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Zbtb22Q9Z0G7 638 aa15.64■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Sh3bp5Q9Z131 463 aa15.64■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Gm973E9Q295 1059 aa15.63■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Myd88P22366 296 aa15.63■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Igflr1Q3U4N7 345 aa15.63■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Ankib1Q6ZPS6 1085 aa15.63■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Ttc19Q8CC21 365 aa15.63■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Cwc25Q9DBF7 416 aa15.63■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Sult6b1P0CC03 303 aa15.63■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Ercc6lQ8BHK9 1240 aa15.63■□□□□ 0.09
Col9a3-201ENSMUST00000103059 DpydQ8CHR6 1025 aa15.63■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Adam1bQ8R534 806 aa15.63■□□□□ 0.09
Col9a3-201ENSMUST00000103059 PhaxQ9JJT9 385 aaKnown RBP15.63■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Tnks1bp1P58871 1720 aa15.63■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Mybbp1aQ7TPV4 1344 aaKnown RBP15.63■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Prl3d3A0A0M6L0J6 224 aa15.63■□□□□ 0.09
Col9a3-201ENSMUST00000103059 CgnP59242 1191 aa15.63■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Zfp51Q3U4L8 781 aa15.63■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Wdr93Q402B2 695 aa15.63■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Ccdc66Q6NS45 935 aa15.63■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Cadps2Q8BYR5 1297 aa15.63■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Trim52Q8CDV4 233 aa15.63■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Golim4Q8BXA1 655 aa15.62■□□□□ 0.09
Col9a3-201ENSMUST00000103059 StrbpQ91WM1 672 aaKnown RBP15.62■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Pus3Q9JI38 481 aa15.62■□□□□ 0.09
Col9a3-201ENSMUST00000103059 BcanQ61361 883 aa15.62■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Ltv1Q6NSQ7 470 aaKnown RBP15.62■□□□□ 0.09
Col9a3-201ENSMUST00000103059 CtifQ6PEE2 600 aaKnown RBP15.62■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Smim5Q8BT42 78 aa15.62■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Smc4Q8CG47 1286 aa15.62■□□□□ 0.09
Col9a3-201ENSMUST00000103059 1700006A11RikB9EHI3 544 aa15.61■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Kcnf1Q7TSH7 493 aa15.61■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Fam84aQ9D650 292 aa15.61■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Mmel1Q9JLI3 765 aa15.61■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Gtpbp6Q3U6U5 514 aa15.61■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Ccnl1Q52KE7 532 aaKnown RBP15.61■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Adam1aQ60813 791 aa15.61■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Rps6kb1Q8BSK8 525 aa15.61■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Ccdc178Q8CDV0 866 aa15.61■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Iffo2Q8R2V2 512 aa15.61■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Gtpbp4Q99ME9 634 aaKnown RBP15.61■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Shank2Q80Z38 1476 aa15.61■□□□□ 0.09
Col9a3-201ENSMUST00000103059 NpeppsQ11011 920 aa15.6■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Smg7Q5RJH6 1138 aaKnown RBP15.6■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Sp8Q8BMJ8 486 aa15.6■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Utp3Q9JI13 469 aaKnown RBP15.6■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Tjp1P39447 1745 aaKnown RBP15.6■□□□□ 0.09
Col9a3-201ENSMUST00000103059 ZgpatQ8VDM1 511 aa15.6■□□□□ 0.09
Col9a3-201ENSMUST00000103059 NaspQ99MD9 773 aaKnown RBP15.6■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Ltb4r2Q9JJL9 360 aa15.6■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Sh3bp1P55194 680 aa15.59■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Cnnm3Q32NY4 713 aa15.59■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Brinp3Q499E0 766 aa15.59■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Ppp4r3aQ6P2K6 820 aa15.59■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Oxsr1Q6P9R2 527 aa15.59■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Nek11Q8C0Q4 628 aa15.59■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Tbc1d8Q9Z1A9 1134 aa15.59■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Zfp142G5E869 1843 aa15.59■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Irgm2A0A140LIF8 407 aa15.59■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Ube2hP62257 183 aa15.59■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Lmbrd2Q8C561 694 aa15.59■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Lrrfip2Q91WK0 415 aa15.59■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Cap2Q9CYT6 476 aa15.59■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Nlrp1aQ2LKU9 1182 aa15.58■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Ubr2Q6WKZ8 1755 aa15.58■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Cdhr2E9Q7P9 1308 aa15.58■□□□□ 0.09
Col9a3-201ENSMUST00000103059 Mcm3P25206 812 aaKnown RBP15.58■□□□□ 0.08
Col9a3-201ENSMUST00000103059 NfkbibQ60778 359 aa15.58■□□□□ 0.08
Col9a3-201ENSMUST00000103059 Atg9aQ68FE2 551 aa15.58■□□□□ 0.08
Col9a3-201ENSMUST00000103059 Tmc2Q8R4P4 888 aa15.58■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 8.5 ms