RNA–Protein interactions for RNA: ENSMUST00000090040.11

Ldb3-205, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 4,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-205ENSMUST00000090040 Map7d2A2AG50 781 aa12.29□□□□□ -0.44
Ldb3-205ENSMUST00000090040 TsksO54887 585 aa12.29□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Ppp1r21Q3TDD9 780 aa12.29□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Cdkl5Q3UTQ8 938 aa12.29□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Tomm22Q9CPQ3 142 aa12.29□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Alpk3Q924C5 1678 aa12.29□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Erich6bQ9D4S6 220 aa12.29□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Timm10P62073 90 aa12.29□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Ifit2Q64112 472 aa12.29□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Clcn1Q64347 994 aa12.29□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Ssh1Q76I79 1042 aa12.29□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Cep55Q8BT07 462 aa12.29□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Rad50P70388 1312 aa12.29□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Mdm2P23804 489 aa12.29□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Ets1P27577 440 aa12.29□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Nphp3Q7TNH6 1325 aa12.28□□□□□ -0.44
Ldb3-205ENSMUST00000090040 FosbP13346 338 aa12.28□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Edc3Q8K2D3 508 aaKnown RBP12.28□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Zbtb1Q91VL9 713 aa12.28□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Adcy9P51830 1353 aa12.28□□□□□ -0.44
Ldb3-205ENSMUST00000090040 NppbP40753 121 aa12.28□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Vps54Q5SPW0 977 aa12.28□□□□□ -0.44
Ldb3-205ENSMUST00000090040 TnksQ6PFX9 1320 aa12.28□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Gm21969J3QJZ1 289 aa12.28□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Ncbp1Q3UYV9 790 aaKnown RBP12.28□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Adam1aQ60813 791 aa12.28□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Bsdc1Q80Y55 427 aa12.28□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Rbm28Q8CGC6 750 aaKnown RBP12.28□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Rps6ka4Q9Z2B9 773 aa12.28□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Chd4Q6PDQ2 1915 aaKnown RBP12.28□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Sh3tc1G3X9F6 1346 aa12.28□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Ppfibp2O35711 882 aa12.28□□□□□ -0.44
Ldb3-205ENSMUST00000090040 SlkO54988 1233 aa12.28□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Ccdc129Q14B48 1034 aa12.28□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Ripor2Q80U16 1078 aa12.28□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Dhx38Q80X98 1228 aa12.28□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Dctn1O08788 1281 aa12.27□□□□□ -0.44
Ldb3-205ENSMUST00000090040 TbcaP48428 108 aaKnown RBP12.27□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Rnf41Q8BH75 317 aa12.27□□□□□ -0.44
Ldb3-205ENSMUST00000090040 HmcesQ8R1M0 353 aaKnown RBP12.27□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Ak2Q9WTP6 239 aa12.27□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Unc13bQ9Z1N9 1602 aa12.27□□□□□ -0.44
Ldb3-205ENSMUST00000090040 Zkscan16A2ALW2 728 aa12.27□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Jdp2P97875 163 aa12.27□□□□□ -0.45
Ldb3-205ENSMUST00000090040 NfkbibQ60778 359 aa12.27□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Gpatch3Q8BIY1 525 aa12.27□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Pik3c2aQ61194 1686 aa12.27□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Ftl2P49945 183 aa12.27□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Kif20aP97329 887 aa12.27□□□□□ -0.45
Ldb3-205ENSMUST00000090040 SfswapQ3USH5 945 aaKnown RBP12.27□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Rab3gap1Q80UJ7 981 aa12.27□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Ccdc158Q8CDI6 1109 aa12.27□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Taf5lQ91WQ5 589 aa12.27□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Ciao1Q99KN2 339 aa12.27□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Slx4ipQ9D7Y9 413 aa12.27□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Stox1B2RQL2 990 aa12.26□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Kdm4cQ8VCD7 1054 aa12.26□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Ttc5Q99LG4 440 aa12.26□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Cdc45Q9Z1X9 566 aa12.26□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Slit1Q80TR4 1531 aa12.26□□□□□ -0.45
Ldb3-205ENSMUST00000090040 CltaO08585 235 aa12.26□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Isy1Q69ZQ2 285 aaKnown RBP12.26□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Tbc1d7Q9D0K0 293 aa12.26□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Slit2Q9R1B9 1521 aa12.26□□□□□ -0.45
Ldb3-205ENSMUST00000090040 A0A1L1SQF0 893 aa12.26□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Prr5lA2AVJ5 370 aa12.26□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Ufl1Q8CCJ3 793 aaKnown RBP12.26□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Dis3l2Q8CI75 870 aaKnown RBP12.26□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Tbc1d4Q8BYJ6 1307 aa12.26□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Plbd2Q3TCN2 594 aa12.26□□□□□ -0.45
Ldb3-205ENSMUST00000090040 MypnQ5DTJ9 1315 aa12.25□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Catsper2A2ARP9 588 aa12.25□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Ints5Q8CHT3 1018 aa12.25□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Hspa2P17156 633 aa12.25□□□□□ -0.45
Ldb3-205ENSMUST00000090040 PdcQ9QW08 244 aa12.25□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Pmfbp1Q9WVQ0 1022 aa12.25□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Plcb3P51432 1234 aaKnown RBP12.25□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Zbtb45Q52KG4 520 aa12.25□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Naa16Q9DBB4 864 aa12.25□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Ripk4Q9ERK0 786 aa12.25□□□□□ -0.45
Ldb3-205ENSMUST00000090040 IntuQ059U7 942 aa12.24□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Limch1Q3UH68 1057 aa12.24□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Mrpl12Q9DB15 201 aaKnown RBP12.24□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Krt85Q9Z2T6 507 aa12.24□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Als2Q920R0 1651 aa12.24□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Becn1O88597 448 aa12.24□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Pdzrn3Q69ZS0 1063 aa12.24□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Gm21985Q6P6P5 1106 aa12.24□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Rec8Q8C5S7 591 aa12.24□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Tmc2Q8R4P4 888 aa12.24□□□□□ -0.45
Ldb3-205ENSMUST00000090040 MthfsQ9D110 203 aa12.24□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Tnni2P13412 182 aa12.23□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Tpm3P21107 285 aaKnown RBP12.23□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Wasf1Q8R5H6 559 aa12.23□□□□□ -0.45
Ldb3-205ENSMUST00000090040 NsmfQ99NF2 532 aa12.23□□□□□ -0.45
Ldb3-205ENSMUST00000090040 ZwintQ9CQU5 252 aa12.23□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Dbndd1Q9CZ00 160 aa12.23□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Mlh1Q9JK91 760 aa12.23□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Atp1b3P97370 278 aa12.23□□□□□ -0.45
Ldb3-205ENSMUST00000090040 Cnnm3Q32NY4 713 aa12.23□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 12 ms