RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Zkscan16A2ALW2 728 aa10.68□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 NpcdF8VQB8 469 aa10.68□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Tmem132eQ6IEE6 982 aa10.68□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Tti2Q8BGV4 512 aa10.68□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Ppfibp2O35711 882 aa10.68□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Exoc1Q8R3S6 894 aa10.68□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Ak2Q9WTP6 239 aa10.68□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Nf2P46662 596 aa10.68□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Grm8P47743 908 aa10.68□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Ifit2Q64112 472 aa10.68□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Slf2Q6P9P0 1278 aa10.68□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Acbd3Q8BMP6 525 aa10.68□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Ctage5Q8R311 779 aa10.68□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Rbm33Q9CXK9 1231 aaKnown RBP10.68□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Nsfl1cQ9CZ44 370 aaKnown RBP10.68□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Nap1l2P51860 460 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Hs2st1Q8R3H7 356 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Atp10dQ8K2X1 1416 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Sycp2lA0A0M3U1B0 842 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Gm45140A0A0N4SUM8 220 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 AU022751B1B0V2 589 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Vamp4O70480 141 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Igflr1Q3U4N7 345 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Specc1Q5SXY1 1067 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Egfl6Q9JJZ5 550 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Gm3409A0A0G2JE67 319 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Zfp853A0A1D5RM95 733 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Ccdc122Q8BVN0 290 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Gm28919A0A087WP35 240 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 E9QMW4 1145 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Spg7Q3ULF4 781 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Zfp251Q6PCX8 632 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Shtn1Q8K2Q9 631 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Fam186bD3Z420 943 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Zfpm1O35615 995 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Fbln2P37889 1221 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Clul1Q3ZRW6 464 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Dph6Q9CQ28 267 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Rufy3Q9D394 469 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Sept14Q9DA97 430 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Frat1P70339 274 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Ccdc82Q6PG04 518 aa10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Acot9Q9R0X4 439 aaKnown RBP10.67□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 OvosQ3UU35 1456 aa10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Slc1a4O35874 532 aa10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Gys2Q8VCB3 704 aa10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 StambpQ9CQ26 424 aa10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 BC005561E9Q5E2 1589 aa10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Usp5P56399 858 aaKnown RBP10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 TchpQ3TVW5 497 aa10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Klc3Q91W40 508 aa10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 RarsQ9D0I9 660 aaKnown RBP10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Speer4aF8VPX6 267 aa10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Mdm2P23804 489 aa10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Psmb7P70195 277 aa10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Spata24Q6P926 205 aa10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Ranbp6Q8BIV3 1105 aa10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Kdm3aQ6PCM1 1323 aa10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Izumo3A6PWV3 263 aa10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Myo1bP46735 1107 aa10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Lmod1Q8BVA4 595 aa10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 ParvgQ9ERD8 331 aa10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Plekho1Q9JIY0 408 aa10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Cnpy2Q9QXT0 182 aa10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Oas2E9Q9A9 742 aa10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Tbc1d5Q80XQ2 815 aa10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Plcd3Q8K2J0 785 aa10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Tubb4aQ9D6F9 444 aa10.66□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Cetn1P41209 172 aa10.65□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Cers3Q1A3B0 383 aa10.65□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Ifit1bl2Q3U687 466 aa10.65□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Gle1Q8R322 699 aa10.65□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Slc4a4O88343 1079 aa10.65□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Ranbp1P34022 203 aaKnown RBP10.65□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 U2af2P26369 475 aaKnown RBP10.65□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Ccdc162pQ0VG85 912 aa10.65□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Gas8Q60779 478 aa10.65□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Jarid2Q62315 1234 aa10.65□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Lamc3Q9R0B6 1581 aa10.65□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 SfpqQ8VIJ6 699 aaKnown RBP10.65□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Frmpd2A0A140LI67 1392 aa10.65□□□□□ -0.7
Prpf40a-201ENSMUST00000076313 Setdb1O88974 1307 aa10.65□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Fam135bQ9DAI6 1403 aa10.65□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Spocd1B1ASB6 936 aa10.65□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Ubash3aQ3V3E1 624 aa10.65□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Krt15Q61414 452 aa10.65□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Ttc12Q8BW49 704 aa10.65□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Amotl2Q8K371 772 aa10.65□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Slc14a2Q8R4T9 930 aa10.65□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Paip2Q9D6V8 124 aa10.65□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Tsr2Q8C8T8 191 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Krt79Q8VED5 531 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Haus2Q9CQS9 234 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 GckrQ91X44 587 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Gpatch8A2A6A1 1505 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Dennd3A2RT67 1274 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Pank2Q3U4S0 443 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Zbtb45Q52KG4 520 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Asic1Q6NXK8 526 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Pnpla2Q8BJ56 486 aa10.64□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 239.2 ms