RNA–Protein interactions for RNA: ENSMUST00000067284.9

Cpsf3-201, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf3, Length 2,499 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-201ENSMUST00000067284 Ncbp1Q3UYV9 790 aaKnown RBP11.39□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Gm21680A0A0G2JGR8 267 aa11.38□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Fkbp5Q64378 456 aa11.38□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Q8C5K5 320 aa11.38□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Smc3Q9CW03 1217 aaKnown RBP11.38□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Zbtb22Q9Z0G7 638 aa11.38□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Shank2Q80Z38 1476 aa11.38□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 MecomP14404 1042 aa11.38□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 NpeppsQ11011 920 aa11.38□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Ddx46Q569Z5 1032 aaKnown RBP11.38□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Smim5Q8BT42 78 aa11.38□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Eif3bQ8JZQ9 803 aaKnown RBP11.38□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Nphp3Q7TNH6 1325 aa11.38□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Zpr1Q62384 459 aa11.37□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Gripap1Q8VD04 806 aa11.37□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Rbbp8nlA2ABX0 614 aa11.37□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Kif4P33174 1231 aa11.37□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Cd22P35329 862 aa11.37□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Timm10P62073 90 aa11.37□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Igflr1Q3U4N7 345 aa11.37□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Adam1aQ60813 791 aa11.37□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Kank4Q6P9J5 1016 aa11.37□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Zbtb40Q6PCS8 1258 aa11.37□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 StrbpQ91WM1 672 aaKnown RBP11.37□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Ltb4r2Q9JJL9 360 aa11.37□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Zscan25B2RX31 543 aa11.36□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Ess2O70279 479 aa11.36□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Dnajc2P54103 621 aaKnown RBP11.36□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Ankle2Q6P1H6 964 aa11.36□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Kcnj4P52189 445 aa11.36□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Ica1lQ3TY65 431 aa11.36□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Pank2Q3U4S0 443 aa11.36□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 AcrbpQ3V140 540 aa11.36□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Samm50Q8BGH2 469 aa11.36□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Rrs1Q9CYH6 365 aaKnown RBP11.36□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Rcan3Q9JKK0 239 aa11.36□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Mad1l1Q9WTX8 717 aaKnown RBP11.36□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Cyp2d10P24456 504 aa11.35□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Ccdc129Q14B48 1034 aa11.35□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Ctdnep1Q3TP92 244 aa11.35□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Gnat3Q3V3I2 354 aa11.35□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Wdr93Q402B2 695 aa11.35□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Atg9aQ68FE2 551 aa11.35□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Prdm4Q80V63 803 aa11.35□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 SnrkQ8VDU5 748 aa11.35□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Arid4aF8VPQ2 1261 aaKnown RBP11.35□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Bach1P97302 739 aa11.35□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Ddx58Q6Q899 926 aa11.35□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Tmem87bQ8BKU8 555 aa11.35□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Flad1Q8R123 492 aa11.35□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Chd1lQ9CXF7 900 aa11.35□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Eef2kO08796 724 aa11.34□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Sult6b1P0CC03 303 aa11.34□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Cdkn1cP49919 348 aa11.34□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Morc2aQ69ZX6 1030 aa11.34□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Ccdc66Q6NS45 935 aa11.34□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Trim52Q8CDV4 233 aa11.34□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Tiam2Q6ZPF3 1715 aa11.34□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Ltbp4Q8K4G1 1666 aa11.34□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Nfatc2ipO09130 412 aa11.34□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Ercc3P49135 783 aa11.34□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Pcmtd1P59913 357 aa11.34□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Ppfia3P60469 1194 aa11.34□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Brd2Q7JJ13 798 aaKnown RBP11.34□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Atf7Q8R0S1 413 aa11.34□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Bcl9lQ67FY2 1494 aa11.34□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 AK157302I3ITR1 129 aa11.33□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Ltv1Q6NSQ7 470 aaKnown RBP11.33□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 CtifQ6PEE2 600 aaKnown RBP11.33□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Rps6kb1Q8BSK8 525 aa11.33□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Lmbrd2Q8C561 694 aa11.33□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Cap2Q9CYT6 476 aa11.33□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Isca1Q9D924 129 aa11.33□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Mcm3P25206 812 aaKnown RBP11.33□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Sh3bp1P55194 680 aa11.33□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Slc20a2Q80UP8 656 aa11.33□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Me3Q8BMF3 604 aa11.33□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Mb21d2Q8C525 428 aa11.33□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Lrrfip2Q91WK0 415 aa11.33□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Samd1D3YXK1 519 aa11.32□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Ptgs1P22437 602 aa11.32□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 RubcnlQ3TD16 648 aa11.32□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 MpndQ3TV65 487 aa11.32□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Brinp3Q499E0 766 aa11.32□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Zscan22Q8BGS5 496 aa11.32□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Golim4Q8BXA1 655 aa11.32□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Ccdc178Q8CDV0 866 aa11.32□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Wdr24Q8CFJ9 790 aa11.32□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Cchcr1Q8K2I2 770 aa11.32□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Prl3d3A0A0M6L0J6 224 aa11.32□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 1700006A11RikB9EHI3 544 aa11.32□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Myd88P22366 296 aa11.32□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 EzrP26040 586 aaKnown RBP11.32□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 FanccP50652 591 aa11.32□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Pde3bQ61409 1100 aa11.32□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Chmp3Q9CQ10 224 aa11.32□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Tnrc6cQ3UHC0 1690 aaKnown RBP11.32□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Shank3Q4ACU6 1730 aa11.32□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Akap11E9Q777 1895 aa11.31□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Plekhd1B2RPU2 505 aa11.31□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms