RNA–Protein interactions for RNA: ENSMUST00000053856.5

Pcdhb17-201, Transcript of MCG141290, mousemouse

APPRIS P1 BASIC

Gene Pcdhb17, Length 4,660 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17-201ENSMUST00000053856 Letm1Q9Z2I0 738 aa13.06□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Rad50P70388 1312 aa13.06□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Trim55G3X8Y1 545 aa13.06□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 DesP31001 469 aaKnown RBP13.06□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Fermt1P59113 677 aa13.06□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Larp1Q6ZQ58 1072 aaKnown RBP13.06□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Slu7Q8BHJ9 585 aa13.06□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Knop1Q9Z2Q2 478 aaKnown RBP13.06□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Pet2A2AHY8 747 aa13.06□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Idi1P58044 227 aa13.06□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Cbx1P83917 185 aaKnown RBP13.06□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Cacna2d4Q5RJF7 1116 aa13.06□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 HomezQ80W88 542 aa13.06□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Atp8b3Q6UQ17 1335 aa13.06□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Myom2Q14BI5 1463 aa13.06□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Pof1bQ8K4L4 587 aa13.06□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Plagl1Q9JLQ4 704 aa13.06□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Metap2O08663 478 aaKnown RBP13.05□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Pdcl2Q78Y63 240 aa13.05□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Kiaa1551Q5DTW7 1521 aa13.05□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Ppp2r5bQ6PD28 497 aa13.05□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Tbc1d5Q80XQ2 815 aa13.05□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 MicalclQ9D5U9 680 aa13.05□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Zbtb43Q9DAI4 467 aa13.05□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Jakmip2D3YXK0 820 aa13.05□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Abcd1P48410 736 aa13.05□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Stxbp3Q60770 592 aa13.05□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Ano8Q6PB70 1060 aa13.05□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Cdca8Q8BHX3 289 aa13.05□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Podxl2Q8CAE9 603 aa13.05□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 HmcesQ8R1M0 353 aaKnown RBP13.05□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Pdcd6ipQ9WU78 869 aaKnown RBP13.05□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Kif5bQ61768 963 aa13.04□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Ltv1Q6NSQ7 470 aaKnown RBP13.04□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Txndc16Q7TN22 820 aa13.04□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 4931400O07RikQ9D4M5 137 aa13.04□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 LlphQ9D945 130 aaKnown RBP13.04□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Slc4a4O88343 1079 aa13.04□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 HellsQ60848 821 aa13.04□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Gnl2Q99LH1 728 aaKnown RBP13.04□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Mrpl44Q9CY73 333 aaKnown RBP13.04□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Asxl2Q8BZ32 1370 aa13.04□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Gse1Q3U3C9 1213 aa13.04□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 TxlnaQ6PAM1 554 aaKnown RBP13.04□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 SympkQ80X82 1284 aa13.04□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 ParnQ8VDG3 624 aa13.04□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Plekhg2Q6KAU7 1340 aa13.04□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Vamp4O70480 141 aa13.04□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Nek11Q8C0Q4 628 aa13.04□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Fermt2Q8CIB5 680 aa13.04□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Kifc2O08672 792 aa13.03□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Fam83gQ5SWY7 812 aa13.03□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Irs4Q9Z0Y7 1216 aa13.03□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Mcm3P25206 812 aaKnown RBP13.03□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Map9Q3TRR0 646 aa13.03□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Slc13a4Q8BZ82 625 aa13.03□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Eya2O08575 532 aa13.03□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Gna11P21278 359 aa13.03□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Kmt5bQ3U8K7 883 aa13.03□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Ttll12Q3UDE2 639 aa13.03□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Calml4Q91WQ9 153 aa13.03□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Mx2Q9WVP9 655 aa13.03□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Lmo7E9PYF4 1699 aaKnown RBP13.03□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Wdr63B2RY71 923 aa13.03□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Stat1P42225 749 aa13.03□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Gm21985Q6P6P5 1106 aa13.03□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Ankrd23Q812A3 306 aa13.03□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Kif14L0N7N1 1674 aaKnown RBP13.02□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Depdc5P61460 1591 aa13.02□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 LdhaP06151 332 aaKnown RBP13.02□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Itga6Q61739 1091 aa13.02□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Ddx10Q80Y44 875 aaKnown RBP13.02□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Ccdc158Q8CDI6 1109 aa13.02□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Smarca5Q91ZW3 1051 aaKnown RBP13.02□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Il1rapl2Q9ERS6 686 aa13.02□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Pkd2l2Q9JLG4 621 aa13.02□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 CenphQ9QYM8 241 aa13.02□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Ankrd50F7BE84 1390 aa13.02□□□□□ -0.32
Pcdhb17-201ENSMUST00000053856 Mtmr3Q8K296 1196 aa13.02□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Bicc1Q99MQ1 977 aaKnown RBP13.02□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Stx8O88983 236 aa13.02□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Pafah1b1P63005 410 aaKnown RBP13.02□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Tbc1d9Q3UYK3 1264 aa13.02□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Tom1l2Q5SRX1 507 aa13.02□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Fmnl3Q6ZPF4 1028 aa13.02□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Stoml1Q8CI66 399 aa13.02□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Tbc1d7Q9D0K0 293 aa13.02□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Tnip1Q9WUU8 647 aa13.02□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Cdk13Q69ZA1 1511 aaKnown RBP13.02□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Rasa1E9PYG6 1038 aa13.01□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 PcQ05920 1178 aa13.01□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Tbc1d32Q3URV1 1296 aa13.01□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Kif22Q3V300 660 aa13.01□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Tacc1Q6Y685 774 aa13.01□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Nos1Q9Z0J4 1429 aa13.01□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Xpo5Q924C1 1204 aaKnown RBP13.01□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Glrx3Q9CQM9 337 aa13.01□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Tns3Q5SSZ5 1440 aa13.01□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Rnf216P58283 853 aa13.01□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Trim30cD3YVI9 513 aa13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms