RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Cdca8Q8BHX3 289 aa20.79■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 CrebrfQ8CDG5 640 aaKnown RBP20.79■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Mtmr3Q8K296 1196 aa20.79■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Abcc4E9Q236 1325 aa20.79■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Trpm3Q5F4S9 1721 aa20.79■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Cnksr1A2A9K7 700 aa20.79■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Cfdp1O88271 295 aaKnown RBP20.79■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Stat1P42225 749 aa20.79■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Bend3Q6PAL0 825 aa20.79■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Atp2b1G5E829 1220 aa20.78■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Tubb6Q922F4 447 aa20.78■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Golph3lQ8R088 285 aaKnown RBP20.78■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Exoc6bA6H5Z3 810 aa20.77■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Pa2g4P50580 394 aaKnown RBP20.77■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Tgfb1i1Q62219 461 aa20.77■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Trak2Q6P9N8 913 aa20.77■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Tmem87aQ8BXN9 555 aa20.77■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Il1rapl2Q9ERS6 686 aa20.77■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Dusp10Q9ESS0 483 aa20.77■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Alpk3Q924C5 1678 aa20.77■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Ccdc112A0AUP1 442 aa20.77■□□□□ 0.92
Sqstm1-201ENSMUST00000015981 Rgs12Q8CGE9 1381 aa20.76■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Map3k13Q1HKZ5 959 aa20.76■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Irx6Q9ER75 438 aa20.76■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 AW822073A0A0N4SUK1 652 aa20.76■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Jakmip2D3YXK0 820 aa20.76■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Ccdc121E9Q6D3 323 aa20.76■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Lrriq3Q14DL3 633 aa20.76■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Mns1Q61884 491 aa20.76■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Ppp1r10Q80W00 888 aaKnown RBP20.76■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Ddx27Q921N6 760 aaKnown RBP20.76■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Mdm2P23804 489 aa20.75■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Dnm3Q8BZ98 863 aa20.75■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Zbtb3Q91X45 518 aa20.75■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 NalcnQ8BXR5 1738 aa20.75■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 AceP09470 1312 aa20.74■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 TrdnE9Q9K5 693 aa20.74■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 EcsitQ9QZH6 435 aa20.74■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Ktn1Q61595 1327 aaKnown RBP20.74■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Tnrc6bQ8BKI2 1810 aaKnown RBP20.74■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 XpcP51612 930 aa20.74■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Gpatch3Q8BIY1 525 aa20.74■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Ccdc102aQ3TMW1 549 aa20.73■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Mphosph10Q810V0 681 aaKnown RBP20.73■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Xpo4Q9ESJ0 1151 aa20.73■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Zranb2Q9R020 330 aaKnown RBP20.73■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Hmg20bQ9Z104 317 aa20.73■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Pik3c2bE9QAN8 1632 aa20.73■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Ifit1Q64282 463 aa20.73■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Tpm4Q6IRU2 248 aa20.73■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Prr29B1ARI9 187 aa20.72■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Hnrnpul1Q8VDM6 859 aaKnown RBP20.72■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Echdc1Q9D9V3 322 aa20.72■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Bag3Q9JLV1 577 aaKnown RBP20.72■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Arhgap4B1AUY3 965 aa20.72■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 TrhQ62361 256 aa20.72■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Atp1a3Q6PIC6 1013 aa20.72■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Zc3h13E9Q784 1729 aaKnown RBP20.72■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Mcm6P97311 821 aa20.71■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Gm156Q58A37 223 aa20.71■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Wdr3Q8BHB4 942 aaKnown RBP20.71■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Edc3Q8K2D3 508 aaKnown RBP20.71■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Ccdc96Q9CR92 584 aa20.71■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Rai14Q9EP71 979 aaKnown RBP20.71■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Ptpn23Q6PB44 1692 aa20.71■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 FosbP13346 338 aa20.71■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Vps18Q8R307 973 aa20.71■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 RubcnlQ3TD16 648 aa20.71■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Slc20a2Q80UP8 656 aa20.71■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Kiaa1524Q8BWY9 907 aa20.71■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Tmx1Q8VBT0 278 aa20.71■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 ChmQ9QXG2 665 aa20.71■□□□□ 0.91
Sqstm1-201ENSMUST00000015981 Znf335A2A5K6 1337 aa20.7■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 Aox2Q5SGK3 1345 aa20.7■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 Cps1Q8C196 1500 aa20.7■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 Kif3cO35066 796 aa20.7■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 Actn3O88990 900 aaKnown RBP20.7■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 Uri1Q3TLD5 531 aa20.7■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 Limch1Q3UH68 1057 aa20.7■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 Mei4Q8BRM6 389 aa20.7■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 Etf1Q8BWY3 437 aaKnown RBP20.7■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 Tubb4aQ9D6F9 444 aa20.7■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 Calcoco2A2A6M5 331 aa20.69■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 Ubap1lG3UW59 384 aa20.69■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 Slc26a8Q8R0C3 999 aa20.69■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 CoblQ5NBX1 1337 aaKnown RBP20.69■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 MlecQ6ZQI3 291 aaKnown RBP20.69■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 Afap1Q80YS6 731 aa20.69■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 Psme1P97371 249 aa20.68■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 Larp1Q6ZQ58 1072 aaKnown RBP20.68■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 Fam76aQ922G2 307 aa20.68■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 Cabp4Q8VHC5 271 aa20.68■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 StrbpQ91WM1 672 aaKnown RBP20.68■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 Col4a3bpQ9EQG9 624 aa20.68■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 Golga5Q9QYE6 729 aa20.68■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 Fyb1O35601 819 aa20.67■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 Cdc37Q61081 379 aa20.67■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 Smarcc2Q6PDG5 1213 aa20.67■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 Mrpl44Q9CY73 333 aaKnown RBP20.67■□□□□ 0.9
Sqstm1-201ENSMUST00000015981 Btn2a2A4QPC6 514 aa20.66■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 11 ms