RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Dhx38Q80X98 1228 aa22.2■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Dis3l2Q8CI75 870 aaKnown RBP22.2■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Bmp2kQ91Z96 1138 aa22.2■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Gm21698A0A087WQP8 267 aa22.2■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Gm21671G3UY31 267 aa22.2■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Tyro3P55144 880 aa22.2■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Kif3aP28741 701 aa22.19■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Lins1Q3U1D0 764 aa22.19■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Kcnf1Q7TSH7 493 aa22.19■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Krt85Q9Z2T6 507 aa22.19■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Srgap1Q91Z69 1062 aa22.19■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Ptgs1P22437 602 aa22.18■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 GnpatP98192 678 aa22.18■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Vps54Q5SPW0 977 aa22.18■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Soga3Q6NZL0 945 aa22.18■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Q8C5K5 320 aa22.18■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Cspp1B2RX88 1205 aa22.18■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Abca15E9PWH4 1668 aa22.18■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Card10P58660 1021 aa22.18■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Gnat3Q3V3I2 354 aa22.18■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Ankle2Q6P1H6 964 aa22.18■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Ddx58Q6Q899 926 aa22.18■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Lrrfip2Q91WK0 415 aa22.17■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Ssfa2Q922B9 1252 aa22.17■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 TnmdQ9EP64 317 aa22.17■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Nfe2l3Q9WTM4 660 aa22.17■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Irgm2A0A140LIF8 407 aa22.17■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Cavin1O54724 392 aa22.17■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Irf5P56477 497 aa22.17■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Ano1Q8BHY3 960 aa22.17■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Usp44Q8C2S0 711 aa22.17■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Plcd3Q8K2J0 785 aa22.17■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Fam50bQ9WTJ8 334 aa22.17■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Ank1Q02357 1862 aa22.16■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Abca3Q8R420 1704 aa22.16■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Hmx1O70218 332 aa22.16■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Ubash3aQ3V3E1 624 aa22.16■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Mb21d2Q8C525 428 aa22.16■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 AtrnQ9WU60 1428 aa22.16■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Lnx1O70263 728 aa22.16■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Tpm3P21107 285 aaKnown RBP22.16■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Nlrp1aQ2LKU9 1182 aa22.16■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Ddx46Q569Z5 1032 aaKnown RBP22.16■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Fkbp5Q64378 456 aa22.16■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Nucb2P81117 420 aa22.15■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Rab3gap1Q80UJ7 981 aa22.15■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Grpel1Q99LP6 217 aa22.15■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 LratQ9JI60 231 aa22.15■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Ppp4r3aQ6P2K6 820 aa22.14■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 Taok2Q6ZQ29 1240 aa22.14■■□□□ 1.14
Shkbp1-201ENSMUST00000003857 R3hcc1Q8BSI6 488 aa22.14■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Iffo2Q8R2V2 512 aa22.14■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Phlpp1Q8CHE4 1687 aa22.14■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Zfp317Q8C0Q5 607 aa22.13■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Ptcd1Q8C2E4 695 aaKnown RBP22.13■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Mctp1E9PV86 951 aa22.13■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 1700113H08RikE9Q9Q5 327 aa22.13■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 AppP12023 770 aa22.13■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Csrnp1P59054 583 aa22.13■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 4930572O03RikQ8C5Y0 211 aa22.13■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Syde2E9PUP1 1314 aa22.13■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 TrdnE9Q9K5 693 aa22.12■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Zbtb40Q6PCS8 1258 aa22.12■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Smarcc2Q6PDG5 1213 aa22.12■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Efcab2Q9CQ46 164 aa22.12■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Col4a1P02463 1669 aa22.12■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Sult6b1P0CC03 303 aa22.12■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 NpeppsQ11011 920 aa22.12■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Trim52Q8CDV4 233 aa22.12■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Erc1Q99MI1 1120 aa22.12■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Tbc1d8Q9Z1A9 1134 aa22.12■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Polr3gQ6NXY9 223 aa22.11■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Nop14Q8R3N1 860 aaKnown RBP22.11■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Prl3d3A0A0M6L0J6 224 aa22.11■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Prl7a2O54831 253 aa22.11■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 NfkbibQ60778 359 aa22.11■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Ccdc158Q8CDI6 1109 aa22.11■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Bicd2Q921C5 820 aa22.11■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Zfp142G5E869 1843 aa22.11■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Gm45140A0A0N4SUM8 220 aa22.1■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Ccdc129Q14B48 1034 aa22.1■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Limch1Q3UH68 1057 aa22.1■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Atg9aQ68FE2 551 aa22.1■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Pus3Q9JI38 481 aa22.1■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Col18a1P39061 1774 aa22.1■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Usp28Q5I043 1051 aa22.1■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 ZyxQ62523 564 aa22.1■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Eif3bQ8JZQ9 803 aaKnown RBP22.1■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Flad1Q8R123 492 aa22.1■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Tmc2Q8R4P4 888 aa22.1■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Hmgn5Q9JL35 406 aa22.1■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Cyp2d10P24456 504 aa22.09■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Nom1Q3UFM5 854 aaKnown RBP22.09■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Ddx17Q501J6 650 aaKnown RBP22.09■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Sh3bgrQ9WUZ7 214 aa22.09■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Tiam2Q6ZPF3 1715 aa22.09■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Sos2Q02384 1333 aa22.09■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Cfap58B2RW38 873 aa22.09■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Mrc1Q61830 1456 aa22.08■■□□□ 1.13
Shkbp1-201ENSMUST00000003857 Ubn2Q80WC1 1314 aa22.08■■□□□ 1.13
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms