RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 FosbP13346 338 aa19.48■□□□□ 0.71
Shh-201ENSMUST00000002708 DbnlQ62418 436 aa19.48■□□□□ 0.71
Shh-201ENSMUST00000002708 Dmrt2Q8BG36 561 aa19.48■□□□□ 0.71
Shh-201ENSMUST00000002708 Me3Q8BMF3 604 aa19.48■□□□□ 0.71
Shh-201ENSMUST00000002708 Slc5a1Q8C3K6 665 aa19.48■□□□□ 0.71
Shh-201ENSMUST00000002708 Q8C5K5 320 aa19.48■□□□□ 0.71
Shh-201ENSMUST00000002708 Shank2Q80Z38 1476 aa19.48■□□□□ 0.71
Shh-201ENSMUST00000002708 Eef2kO08796 724 aa19.47■□□□□ 0.71
Shh-201ENSMUST00000002708 Fkbp5Q64378 456 aa19.47■□□□□ 0.71
Shh-201ENSMUST00000002708 Morc2aQ69ZX6 1030 aa19.47■□□□□ 0.71
Shh-201ENSMUST00000002708 Oxsr1Q6P9R2 527 aa19.47■□□□□ 0.71
Shh-201ENSMUST00000002708 Lekr1B2RVN1 116 aa19.47■□□□□ 0.71
Shh-201ENSMUST00000002708 Cbx1P83917 185 aaKnown RBP19.47■□□□□ 0.71
Shh-201ENSMUST00000002708 Zfp113Q8C689 439 aa19.47■□□□□ 0.71
Shh-201ENSMUST00000002708 Kansl3A2RSY1 903 aaKnown RBP19.47■□□□□ 0.71
Shh-201ENSMUST00000002708 Leo1Q5XJE5 667 aa19.47■□□□□ 0.71
Shh-201ENSMUST00000002708 Dis3l2Q8CI75 870 aaKnown RBP19.47■□□□□ 0.71
Shh-201ENSMUST00000002708 Eif3bQ8JZQ9 803 aaKnown RBP19.47■□□□□ 0.71
Shh-201ENSMUST00000002708 Zkscan7E9PVW1 718 aa19.46■□□□□ 0.71
Shh-201ENSMUST00000002708 Ctdnep1Q3TP92 244 aa19.46■□□□□ 0.71
Shh-201ENSMUST00000002708 Nap1l3Q794H2 544 aa19.46■□□□□ 0.71
Shh-201ENSMUST00000002708 Igbp1bQ9QZ29 343 aa19.46■□□□□ 0.71
Shh-201ENSMUST00000002708 NaspQ99MD9 773 aaKnown RBP19.46■□□□□ 0.71
Shh-201ENSMUST00000002708 Col4a1P02463 1669 aa19.46■□□□□ 0.7
Shh-201ENSMUST00000002708 Tyro3P55144 880 aa19.45■□□□□ 0.7
Shh-201ENSMUST00000002708 Zpr1Q62384 459 aa19.45■□□□□ 0.7
Shh-201ENSMUST00000002708 Tmem87bQ8BKU8 555 aa19.45■□□□□ 0.7
Shh-201ENSMUST00000002708 Abca15E9PWH4 1668 aa19.45■□□□□ 0.7
Shh-201ENSMUST00000002708 Rbbp8nlA2ABX0 614 aa19.45■□□□□ 0.7
Shh-201ENSMUST00000002708 1700006A11RikB9EHI3 544 aa19.45■□□□□ 0.7
Shh-201ENSMUST00000002708 EzrP26040 586 aaKnown RBP19.45■□□□□ 0.7
Shh-201ENSMUST00000002708 Lins1Q3U1D0 764 aa19.45■□□□□ 0.7
Shh-201ENSMUST00000002708 Vps54Q5SPW0 977 aa19.45■□□□□ 0.7
Shh-201ENSMUST00000002708 Ankle2Q6P1H6 964 aa19.45■□□□□ 0.7
Shh-201ENSMUST00000002708 Amigo3Q8C2S7 508 aa19.45■□□□□ 0.7
Shh-201ENSMUST00000002708 Rhot2Q8JZN7 620 aa19.45■□□□□ 0.7
Shh-201ENSMUST00000002708 Atf7Q8R0S1 413 aa19.45■□□□□ 0.7
Shh-201ENSMUST00000002708 Ssfa2Q922B9 1252 aa19.45■□□□□ 0.7
Shh-201ENSMUST00000002708 Slit1Q80TR4 1531 aa19.44■□□□□ 0.7
Shh-201ENSMUST00000002708 Ubash3aQ3V3E1 624 aa19.44■□□□□ 0.7
Shh-201ENSMUST00000002708 Txnrd1Q9JMH6 613 aa19.44■□□□□ 0.7
Shh-201ENSMUST00000002708 Mybbp1aQ7TPV4 1344 aaKnown RBP19.44■□□□□ 0.7
Shh-201ENSMUST00000002708 Atp2b3Q0VF55 1220 aa19.44■□□□□ 0.7
Shh-201ENSMUST00000002708 Ano6Q6P9J9 911 aa19.44■□□□□ 0.7
Shh-201ENSMUST00000002708 Flad1Q8R123 492 aa19.44■□□□□ 0.7
Shh-201ENSMUST00000002708 Tbc1d8Q9Z1A9 1134 aa19.44■□□□□ 0.7
Shh-201ENSMUST00000002708 Syde2E9PUP1 1314 aa19.43■□□□□ 0.7
Shh-201ENSMUST00000002708 Kif3aP28741 701 aa19.43■□□□□ 0.7
Shh-201ENSMUST00000002708 FanccP50652 591 aa19.43■□□□□ 0.7
Shh-201ENSMUST00000002708 Gnat3Q3V3I2 354 aa19.43■□□□□ 0.7
Shh-201ENSMUST00000002708 TrhQ62361 256 aa19.43■□□□□ 0.7
Shh-201ENSMUST00000002708 Ddx58Q6Q899 926 aa19.43■□□□□ 0.7
Shh-201ENSMUST00000002708 Fbxo2Q80UW2 297 aa19.43■□□□□ 0.7
Shh-201ENSMUST00000002708 Mctp1E9PV86 951 aa19.43■□□□□ 0.7
Shh-201ENSMUST00000002708 PdcQ9QW08 244 aa19.43■□□□□ 0.7
Shh-201ENSMUST00000002708 Psma5Q9Z2U1 241 aaKnown RBP19.43■□□□□ 0.7
Shh-201ENSMUST00000002708 Tpd52l1O54818 204 aa19.42■□□□□ 0.7
Shh-201ENSMUST00000002708 Hmx1O70218 332 aa19.42■□□□□ 0.7
Shh-201ENSMUST00000002708 Ddx46Q569Z5 1032 aaKnown RBP19.42■□□□□ 0.7
Shh-201ENSMUST00000002708 Rnf20Q5DTM8 973 aa19.42■□□□□ 0.7
Shh-201ENSMUST00000002708 Pip4k2bQ80XI4 416 aa19.42■□□□□ 0.7
Shh-201ENSMUST00000002708 SnrkQ8VDU5 748 aa19.42■□□□□ 0.7
Shh-201ENSMUST00000002708 StrbpQ91WM1 672 aaKnown RBP19.42■□□□□ 0.7
Shh-201ENSMUST00000002708 Gm21680A0A0G2JGR8 267 aa19.42■□□□□ 0.7
Shh-201ENSMUST00000002708 Ifit1Q64282 463 aa19.42■□□□□ 0.7
Shh-201ENSMUST00000002708 Rapgef3Q8VCC8 918 aa19.42■□□□□ 0.7
Shh-201ENSMUST00000002708 Bloc1s2Q9CWG9 143 aa19.42■□□□□ 0.7
Shh-201ENSMUST00000002708 Ccdc94Q9D6J3 314 aa19.42■□□□□ 0.7
Shh-201ENSMUST00000002708 TnmdQ9EP64 317 aa19.42■□□□□ 0.7
Shh-201ENSMUST00000002708 Ank1Q02357 1862 aa19.41■□□□□ 0.7
Shh-201ENSMUST00000002708 Zbtb40Q6PCS8 1258 aa19.41■□□□□ 0.7
Shh-201ENSMUST00000002708 Rps6kb1Q8BSK8 525 aa19.41■□□□□ 0.7
Shh-201ENSMUST00000002708 Ccdc162pQ0VG85 912 aa19.4■□□□□ 0.7
Shh-201ENSMUST00000002708 Nucb2P81117 420 aa19.4■□□□□ 0.7
Shh-201ENSMUST00000002708 Rrs1Q9CYH6 365 aaKnown RBP19.4■□□□□ 0.7
Shh-201ENSMUST00000002708 Wdr33Q8K4P0 1330 aaKnown RBP19.4■□□□□ 0.7
Shh-201ENSMUST00000002708 Oas2E9Q9A9 742 aa19.39■□□□□ 0.7
Shh-201ENSMUST00000002708 Trim30aP15533 496 aa19.39■□□□□ 0.7
Shh-201ENSMUST00000002708 Ints5Q8CHT3 1018 aa19.39■□□□□ 0.7
Shh-201ENSMUST00000002708 Bicd2Q921C5 820 aa19.39■□□□□ 0.69
Shh-201ENSMUST00000002708 Frmd3Q8BHD4 595 aa19.38■□□□□ 0.69
Shh-201ENSMUST00000002708 Arid5bQ8BM75 1188 aaKnown RBP19.38■□□□□ 0.69
Shh-201ENSMUST00000002708 Pus3Q9JI38 481 aa19.38■□□□□ 0.69
Shh-201ENSMUST00000002708 Plekhd1B2RPU2 505 aa19.38■□□□□ 0.69
Shh-201ENSMUST00000002708 Zfp251Q6PCX8 632 aa19.38■□□□□ 0.69
Shh-201ENSMUST00000002708 Trim52Q8CDV4 233 aa19.38■□□□□ 0.69
Shh-201ENSMUST00000002708 Tbc1d4Q8BYJ6 1307 aa19.38■□□□□ 0.69
Shh-201ENSMUST00000002708 Samd1D3YXK1 519 aa19.38■□□□□ 0.69
Shh-201ENSMUST00000002708 Sult6b1P0CC03 303 aa19.38■□□□□ 0.69
Shh-201ENSMUST00000002708 Timm10P62073 90 aa19.38■□□□□ 0.69
Shh-201ENSMUST00000002708 NpeppsQ11011 920 aa19.38■□□□□ 0.69
Shh-201ENSMUST00000002708 CrebrfQ8CDG5 640 aaKnown RBP19.38■□□□□ 0.69
Shh-201ENSMUST00000002708 Acsbg1Q99PU5 721 aa19.38■□□□□ 0.69
Shh-201ENSMUST00000002708 PhaxQ9JJT9 385 aaKnown RBP19.38■□□□□ 0.69
Shh-201ENSMUST00000002708 U2af2P26369 475 aaKnown RBP19.37■□□□□ 0.69
Shh-201ENSMUST00000002708 Sass6Q80UK7 654 aa19.37■□□□□ 0.69
Shh-201ENSMUST00000002708 Plcd1Q8R3B1 756 aa19.37■□□□□ 0.69
Shh-201ENSMUST00000002708 Nlrp3Q8R4B8 1033 aa19.37■□□□□ 0.69
Shh-201ENSMUST00000002708 Chmp3Q9CQ10 224 aa19.37■□□□□ 0.69
Shh-201ENSMUST00000002708 ZwintQ9CQU5 252 aa19.37■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 91.7 ms