RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 VDAC3Q9Y277 283 aa4.21□□□□□ -1.74
ATXN3-237ENST00000556274 UTP20O75691 2785 aaKnown RBP4.21□□□□□ -1.74
ATXN3-237ENST00000556274 CFAP46Q8IYW2 2715 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 LOC100653049A0A140TA62 436 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 FAM234BA2RU67 622 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 C5orf58C9J3I9 102 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 PRSS44E7EML9 344 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 H0Y3Z8 333 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 RAB27BO00194 218 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 ZNF195O14628 629 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 BCKDKO14874 412 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 ANGPT2O15123 496 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 TO15178 435 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 SEC14L5O43304 696 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 HCRTR2O43614 444 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 RGS10O43665 173 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 FADS1O60427 444 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 EDF1O60869 148 aaKnown RBP4.2□□□□□ -1.74
ATXN3-237ENST00000556274 TRIM3O75382 744 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-237ENST00000556274 STX11O75558 287 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 KRT34O76011 436 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 GLSO94925 669 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-237ENST00000556274 NKX2-2O95096 273 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 KRT75O95678 551 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 C1QCP02747 245 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 MT-ND5P03915 603 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 FESP07332 822 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 NDUFB7P17568 137 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 CCNA2P20248 432 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 ELAVL4P26378 380 aaKnown RBP4.2□□□□□ -1.74
ATXN3-237ENST00000556274 PRKAR1BP31321 381 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 RYKP34925 604 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 LIPAP38571 399 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 MDH1P40925 334 aaKnown RBP4.2□□□□□ -1.74
ATXN3-237ENST00000556274 FRKP42685 505 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-237ENST00000556274 CDKN2CP42773 168 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 CA7P43166 264 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 PTDSS1P48651 473 aaKnown RBP4.2□□□□□ -1.74
ATXN3-237ENST00000556274 KHKP50053 298 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 ZNF41P51814 821 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-237ENST00000556274 CBX1P83916 185 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 SRSF1Q07955 248 aaKnown RBP eCLIP4.2□□□□□ -1.74
ATXN3-237ENST00000556274 FOXO1Q12778 655 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 FOXD4Q12950 439 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-237ENST00000556274 SNTA1Q13424 505 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 NDUFAF6Q330K2 333 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 KRTAP15-1Q3LI76 137 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 DCST2Q5T1A1 773 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.2□□□□□ -1.74
ATXN3-237ENST00000556274 RAET1LQ5VY80 246 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 SLC2A7Q6PXP3 512 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 ENPP6Q6UWR7 440 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 PLXDC2Q6UX71 529 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 KCTD20Q7Z5Y7 419 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 IFNEQ86WN2 208 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 CCDC71Q8IV32 467 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-237ENST00000556274 SIAH3Q8IW03 269 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 WDSUB1Q8N9V3 476 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 OR8J2Q8NGG1 315 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 B4GALNT2Q8NHY0 566 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 ZNF563Q8TA94 476 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 NEIL3Q8TAT5 605 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 SFXN5Q8TD22 340 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 CA5BP1Q8WTZ4 195 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 IPCEF1Q8WWN9 437 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-237ENST00000556274 RND1Q92730 232 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 TESCQ96BS2 214 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 ROPN1LQ96C74 230 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 SDCCAG3Q96C92 435 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 R3HDM4Q96D70 268 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 SPDL1Q96EA4 605 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 GIMAP5Q96F15 307 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 TMEM41AQ96HV5 264 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 SNX22Q96L94 193 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 SFXN2Q96NB2 322 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 SECISBP2Q96T21 854 aaKnown RBP4.2□□□□□ -1.74
ATXN3-237ENST00000556274 STACQ99469 402 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 SDF2Q99470 211 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 BARD1Q99728 777 aaKnown RBP4.2□□□□□ -1.74
ATXN3-237ENST00000556274 ELAC2Q9BQ52 826 aaKnown RBP4.2□□□□□ -1.74
ATXN3-237ENST00000556274 THUMPD3Q9BV44 507 aaKnown RBP4.2□□□□□ -1.74
ATXN3-237ENST00000556274 HOXD1Q9GZZ0 328 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 TP63Q9H3D4 680 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-237ENST00000556274 UBQLN4Q9NRR5 601 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 SERTAD4Q9NUC0 356 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 TBC1D23Q9NUY8 699 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 BTNL2Q9UIR0 455 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 FBXL2Q9UKC9 423 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 CARD8Q9Y2G2 431 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 C15orf41Q9Y2V0 281 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 MEMO1Q9Y316 297 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 WIF1Q9Y5W5 379 aa4.2□□□□□ -1.74
ATXN3-237ENST00000556274 TENM4Q6N022 2769 aa4.19□□□□□ -1.74
ATXN3-237ENST00000556274 HELZ2Q9BYK8 2649 aaKnown RBP4.19□□□□□ -1.74
ATXN3-237ENST00000556274 NKX2-6A6NCS4 301 aa4.19□□□□□ -1.74
ATXN3-237ENST00000556274 LRRC3CA6NJW4 275 aa4.19□□□□□ -1.74
ATXN3-237ENST00000556274 EVPLLA8MZ36 301 aa4.19□□□□□ -1.74
ATXN3-237ENST00000556274 CLIC1O00299 241 aa4.19□□□□□ -1.74
ATXN3-237ENST00000556274 ANKRD28O15084 1053 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms