RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 GGHQ92820 318 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 KIAA1143Q96AT1 154 aaPredicted RBP8.53□□□□□ -1.04
VPS52-216ENST00000471309 NTNG2Q96CW9 530 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 LRR1Q96L50 414 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 FN3KQ9H479 309 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 CDCP1Q9H5V8 836 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 ASCL3Q9NQ33 180 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 GPR83Q9NYM4 423 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 DNAJC27Q9NZQ0 273 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 OSGIN1Q9UJX0 560 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 HIF3AQ9Y2N7 669 aa8.53□□□□□ -1.04
VPS52-216ENST00000471309 PTPRBP23467 1997 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 CPAMD8Q8IZJ3 1885 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 TRAV36DV7A0A075B6V5 113 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 TMED7-TICAM2A0A0A6YYA0 188 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 ANKRD33BA6NCL7 494 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 SNTNA6NMZ2 147 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 A8MVM7 634 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 SLC30A4O14863 429 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 PRODHO43272 600 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 SUSD5O60279 629 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 NPIPB7O75200 414 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 SLC25A12O75746 678 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 DXOO77932 396 aaKnown RBP8.52□□□□□ -1.05
VPS52-216ENST00000471309 CH25HO95992 272 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 MT-ATP6P00846 226 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 MT-ND2P03891 347 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 CDK1P06493 297 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 ASAH2BP0C7U1 165 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 LIPCP11150 499 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 DBTP11182 482 aaKnown RBP8.52□□□□□ -1.05
VPS52-216ENST00000471309 APOBEC1P41238 236 aaKnown RBP8.52□□□□□ -1.05
VPS52-216ENST00000471309 ZNF41P51814 821 aaPredicted RBP8.52□□□□□ -1.05
VPS52-216ENST00000471309 MAP2K6P52564 334 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 PRPS1P60891 318 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 EMX1Q04741 257 aaPredicted RBP8.52□□□□□ -1.05
VPS52-216ENST00000471309 ATP1A4Q13733 1029 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 RAB39AQ14964 217 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 SLC25A53Q5H9E4 307 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 FCRLBQ6BAA4 426 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 GTF2IRD2BQ6EKJ0 949 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 ARHGAP11AQ6P4F7 1023 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 IL20RBQ6UXL0 311 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 GTF2IRD2Q86UP8 949 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 LSRQ86X29 649 aaPredicted RBP8.52□□□□□ -1.05
VPS52-216ENST00000471309 TMEM156Q8N614 296 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 IL22RA1Q8N6P7 574 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 FADS6Q8N9I5 356 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 ANKK1Q8NFD2 765 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 OR2M3Q8NG83 312 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 OR51A7Q8NH64 312 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 C9orf43Q8TAL5 461 aaPredicted RBP8.52□□□□□ -1.05
VPS52-216ENST00000471309 STK35Q8TDR2 534 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 FCGR1BQ92637 280 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 MUL1Q969V5 352 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 KTI12Q96EK9 354 aaPredicted RBP8.52□□□□□ -1.05
VPS52-216ENST00000471309 PLEKHA8Q96JA3 519 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 SGCZQ96LD1 299 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 ZNF582Q96NG8 517 aaPredicted RBP8.52□□□□□ -1.05
VPS52-216ENST00000471309 TNFRSF13CQ96RJ3 184 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 GPX7Q96SL4 187 aaPredicted RBP8.52□□□□□ -1.05
VPS52-216ENST00000471309 IFT27Q9BW83 186 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 ANGPTL4Q9BY76 406 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 NDEL1Q9GZM8 345 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 CCDC90BQ9GZT6 254 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 FKRPQ9H9S5 495 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 GPN2Q9H9Y4 310 aaPredicted RBP8.52□□□□□ -1.05
VPS52-216ENST00000471309 CMC2Q9NRP2 79 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 HPF1Q9NWY4 346 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 IL20RAQ9UHF4 553 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 ZNF229Q9UJW7 825 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 TMED7Q9Y3B3 224 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 RPL36Q9Y3U8 105 aaKnown RBP8.52□□□□□ -1.05
VPS52-216ENST00000471309 HRH3Q9Y5N1 445 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 MRPS18BQ9Y676 258 aaKnown RBP8.52□□□□□ -1.05
VPS52-216ENST00000471309 HEATR5AQ86XA9 2040 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 CACNA1AO00555 2505 aa8.52□□□□□ -1.05
VPS52-216ENST00000471309 TMEM72A0PK05 275 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 IRGMA1A4Y4 181 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 C2orf72A6NCS6 295 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 FAM47E-STBD1D6RA91 191 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 LRRN3E7EW58 273 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 M0R3G1 203 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 MASP2O00187 686 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 SEC14L2O76054 403 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 PPP1R3DO95685 299 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 FADS2O95864 444 aaKnown RBP8.51□□□□□ -1.05
VPS52-216ENST00000471309 BGLAPP02818 100 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 TSPAN19P0C672 248 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 UQCRC1P31930 480 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 MASP1P48740 699 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 FOXK2Q01167 660 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 FOXF1Q12946 379 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 AIMP2Q13155 320 aaKnown RBP8.51□□□□□ -1.05
VPS52-216ENST00000471309 PMS2P3Q13401 168 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 TUBA3CQ13748 450 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 PLPPR5Q32ZL2 321 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 ACER2Q5QJU3 275 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 FAM69AQ5T7M9 428 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms