RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 HNRNPKP61978 463 aaKnown RBP eCLIP7.82□□□□□ -1.16
VPS36-201ENST00000378060 NTHL1P78549 312 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 IL13RA1P78552 427 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 ASAH1Q13510 395 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 GPR50Q13585 617 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 NKPD1Q17RQ9 610 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 AFMIDQ63HM1 303 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 WBP2NLQ6ICG8 309 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 SFXN4Q6P4A7 337 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 APOOLQ6UXV4 268 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 TMPRSS9Q7Z410 1059 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 ZNF546Q86UE3 836 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 MEX3DQ86XN8 651 aaKnown RBP7.82□□□□□ -1.16
VPS36-201ENST00000378060 SGPP2Q8IWX5 399 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 NANOGP1Q8N7R0 232 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 GIMAP1Q8WWP7 306 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 DCUN1D4Q92564 292 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 BORCS8Q96FH0 119 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 INIPQ9NRY2 104 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 C1GALT1Q9NS00 363 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 ASF1BQ9NVP2 202 aa7.82□□□□□ -1.16
VPS36-201ENST00000378060 FAM171A2A8MVW0 826 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 FABP7O15540 132 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 SULT1B1O43704 296 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 AIFM1O95831 613 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 CD6P30203 668 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 PSPHP78330 225 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 TLE3Q04726 772 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 LTBQ06643 244 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 CAMK2DQ13557 499 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 EIF2B1Q14232 305 aaKnown RBP7.81□□□□□ -1.16
VPS36-201ENST00000378060 OPCMLQ14982 345 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 PTPRRQ15256 657 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 CTU2Q2VPK5 515 aaKnown RBP7.81□□□□□ -1.16
VPS36-201ENST00000378060 FCRLAQ7L513 359 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 OR5D14Q8NGL3 314 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 ABHD4Q8TB40 342 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 C8orf33Q9H7E9 229 aaPredicted RBP7.81□□□□□ -1.16
VPS36-201ENST00000378060 FZD3Q9NPG1 666 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 NRIP3Q9NQ35 241 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 UBQLN4Q9NRR5 601 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 GMEB2Q9UKD1 530 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 A6NIN4 97 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 MPIG6BO95866 241 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 GYPBP06028 91 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 SBK3P0C264 359 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 PPP3CBP16298 524 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 ZNF43P17038 809 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 RPS19P39019 145 aaKnown RBP7.81□□□□□ -1.16
VPS36-201ENST00000378060 GDNFP39905 211 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 CAV3P56539 151 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 COX20Q5RI15 118 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 MRPL2Q5T653 305 aaKnown RBP7.81□□□□□ -1.16
VPS36-201ENST00000378060 RTL6Q6ICC9 239 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 LYPD4Q6UWN0 246 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 UEVLDQ8IX04 471 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 PLPP6Q8IY26 295 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 MFSD9Q8NBP5 474 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 SLC2A12Q8TD20 617 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 TCTEX1D2Q8WW35 142 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 GHSRQ92847 366 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 ZNF419Q96HQ0 510 aaPredicted RBP7.81□□□□□ -1.16
VPS36-201ENST00000378060 CTRCQ99895 268 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 ZNF442Q9H7R0 627 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 TAS2R16Q9NYV7 291 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 TRAV27A0A087WT01 109 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 TCRBV21S2A2A0A5A6 115 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 SEMA4FO95754 770 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 TMEM225BP0DP42 221 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 GAAP10253 952 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 NPPBP16860 134 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 RAB3AP20336 220 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 HLA-DMAP28067 261 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 DHPSP49366 369 aaPredicted RBP7.81□□□□□ -1.16
VPS36-201ENST00000378060 REEP5Q00765 189 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 PLGLB1Q02325 96 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 MRPL49Q13405 166 aaKnown RBP7.81□□□□□ -1.16
VPS36-201ENST00000378060 DUSP6Q16828 381 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 CD276Q5ZPR3 534 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 NLGN4XQ8N0W4 816 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 UBE2FQ969M7 185 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 SLC25A46Q96AG3 418 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 ISYNA1Q9NPH2 558 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 B3GNT2Q9NY97 397 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 GLTPQ9NZD2 209 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 OSGIN1Q9UJX0 560 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 TSC2P49815 1807 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 PLXNA4Q9HCM2 1894 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 ARPC4-TTLL3A0A0A6YYG9 625 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 GFYI3L273 518 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 SULT1C4O75897 302 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 F11P03951 625 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 CFIP05156 583 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 MSL3P1P0C860 447 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 ZNF16P17020 682 aaPredicted RBP7.81□□□□□ -1.16
VPS36-201ENST00000378060 NFYAP23511 347 aaPredicted RBP7.81□□□□□ -1.16
VPS36-201ENST00000378060 HTR3AP46098 478 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 POU3F4P49335 361 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 GPR18Q14330 331 aa7.81□□□□□ -1.16
VPS36-201ENST00000378060 PPA1Q15181 289 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms