RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 GPN2Q9H9Y4 310 aaPredicted RBP16.97■□□□□ 0.31
PTN-201ENST00000348225 MCCC2Q9HCC0 563 aa16.97■□□□□ 0.31
PTN-201ENST00000348225 MED11Q9P086 117 aa16.97■□□□□ 0.31
PTN-201ENST00000348225 TMED7Q9Y3B3 224 aa16.97■□□□□ 0.31
PTN-201ENST00000348225 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.96■□□□□ 0.31
PTN-201ENST00000348225 FAM47E-STBD1D6RA91 191 aa16.96■□□□□ 0.31
PTN-201ENST00000348225 MT-ND2P03891 347 aa16.96■□□□□ 0.31
PTN-201ENST00000348225 CDK1P06493 297 aa16.96■□□□□ 0.31
PTN-201ENST00000348225 PIPP12273 146 aaPredicted RBP16.96■□□□□ 0.31
PTN-201ENST00000348225 PRKCAP17252 672 aa16.96■□□□□ 0.31
PTN-201ENST00000348225 DLX5P56178 289 aa16.96■□□□□ 0.31
PTN-201ENST00000348225 ANKDD1AQ495B1 522 aa16.96■□□□□ 0.31
PTN-201ENST00000348225 SYT14P1Q58G82 188 aa16.96■□□□□ 0.31
PTN-201ENST00000348225 BORAQ6PGQ7 559 aa16.96■□□□□ 0.31
PTN-201ENST00000348225 POMZP3Q6PJE2 187 aa16.96■□□□□ 0.31
PTN-201ENST00000348225 THSD4Q6ZMP0 1018 aa16.96■□□□□ 0.31
PTN-201ENST00000348225 TMPRSS7Q7RTY8 843 aa16.96■□□□□ 0.31
PTN-201ENST00000348225 DTX1Q86Y01 620 aa16.96■□□□□ 0.31
PTN-201ENST00000348225 SGCZQ96LD1 299 aa16.96■□□□□ 0.31
PTN-201ENST00000348225 NDEL1Q9GZM8 345 aa16.96■□□□□ 0.31
PTN-201ENST00000348225 NANSQ9NR45 359 aa16.96■□□□□ 0.31
PTN-201ENST00000348225 GPR83Q9NYM4 423 aa16.96■□□□□ 0.31
PTN-201ENST00000348225 ZNF292O60281 2723 aa16.96■□□□□ 0.31
PTN-201ENST00000348225 PTPRBP23467 1997 aa16.96■□□□□ 0.31
PTN-201ENST00000348225 TRAV36DV7A0A075B6V5 113 aa16.96■□□□□ 0.3
PTN-201ENST00000348225 MASP2O00187 686 aa16.96■□□□□ 0.3
PTN-201ENST00000348225 SUSD5O60279 629 aa16.96■□□□□ 0.3
PTN-201ENST00000348225 CCNA2P20248 432 aa16.96■□□□□ 0.3
PTN-201ENST00000348225 PRPS1P60891 318 aa16.96■□□□□ 0.3
PTN-201ENST00000348225 EGR4Q05215 589 aa16.96■□□□□ 0.3
PTN-201ENST00000348225 FOXB2Q5VYV0 432 aa16.96■□□□□ 0.3
PTN-201ENST00000348225 XAF1Q6GPH4 301 aa16.96■□□□□ 0.3
PTN-201ENST00000348225 LSRQ86X29 649 aaPredicted RBP16.96■□□□□ 0.3
PTN-201ENST00000348225 GPALPP1Q8IXQ4 340 aa16.96■□□□□ 0.3
PTN-201ENST00000348225 STK35Q8TDR2 534 aa16.96■□□□□ 0.3
PTN-201ENST00000348225 PAQR8Q8TEZ7 354 aa16.96■□□□□ 0.3
PTN-201ENST00000348225 FGF11Q92914 225 aa16.96■□□□□ 0.3
PTN-201ENST00000348225 ZNF582Q96NG8 517 aaPredicted RBP16.96■□□□□ 0.3
PTN-201ENST00000348225 SIGLEC11Q96RL6 698 aa16.96■□□□□ 0.3
PTN-201ENST00000348225 ASCL3Q9NQ33 180 aa16.96■□□□□ 0.3
PTN-201ENST00000348225 IL17BQ9UHF5 180 aa16.96■□□□□ 0.3
PTN-201ENST00000348225 A8MVM7 634 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 KDM4EB2RXH2 506 aaPredicted RBP16.95■□□□□ 0.3
PTN-201ENST00000348225 LRRN3E7EW58 273 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 PRODHO43272 600 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 APOBEC1P41238 236 aaKnown RBP16.95■□□□□ 0.3
PTN-201ENST00000348225 MLLT10P55197 1068 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 RPS4XP62701 263 aaKnown RBP16.95■□□□□ 0.3
PTN-201ENST00000348225 EMX1Q04741 257 aaPredicted RBP16.95■□□□□ 0.3
PTN-201ENST00000348225 PMS2P3Q13401 168 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 RAB39AQ14964 217 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 SLC22A10Q63ZE4 541 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 ARHGAP11AQ6P4F7 1023 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 SIRT6Q8N6T7 355 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 LRRC17Q8N6Y2 441 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 ANKK1Q8NFD2 765 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 OR2M3Q8NG83 312 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 OR4K17Q8NGC6 315 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 RFKQ969G6 155 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 TMIGD2Q96BF3 282 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 KTI12Q96EK9 354 aaPredicted RBP16.95■□□□□ 0.3
PTN-201ENST00000348225 THOC3Q96J01 351 aaKnown RBP16.95■□□□□ 0.3
PTN-201ENST00000348225 FRMD6Q96NE9 622 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 ANGPTL4Q9BY76 406 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 FN3KQ9H479 309 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 PTGES2Q9H7Z7 377 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 FKRPQ9H9S5 495 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 SH2D2AQ9NP31 389 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 TEKT2Q9UIF3 430 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 ZNF229Q9UJW7 825 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 GPR52Q9Y2T5 361 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 CFAP54Q96N23 3096 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 PCSK5Q92824 1860 aa16.95■□□□□ 0.3
PTN-201ENST00000348225 IRGMA1A4Y4 181 aa16.94■□□□□ 0.3
PTN-201ENST00000348225 CCDC160A6NGH7 325 aa16.94■□□□□ 0.3
PTN-201ENST00000348225 M0R3G1 203 aa16.94■□□□□ 0.3
PTN-201ENST00000348225 ETV2O00321 342 aaPredicted RBP16.94■□□□□ 0.3
PTN-201ENST00000348225 SLC30A4O14863 429 aa16.94■□□□□ 0.3
PTN-201ENST00000348225 PPP1R3DO95685 299 aa16.94■□□□□ 0.3
PTN-201ENST00000348225 FADS2O95864 444 aaKnown RBP16.94■□□□□ 0.3
PTN-201ENST00000348225 LIPCP11150 499 aa16.94■□□□□ 0.3
PTN-201ENST00000348225 DBTP11182 482 aaKnown RBP16.94■□□□□ 0.3
PTN-201ENST00000348225 PCMT1P22061 227 aa16.94■□□□□ 0.3
PTN-201ENST00000348225 SLC15A1P46059 708 aa16.94■□□□□ 0.3
PTN-201ENST00000348225 ZNF91Q05481 1191 aa16.94■□□□□ 0.3
PTN-201ENST00000348225 ST3GAL4Q11206 333 aa16.94■□□□□ 0.3
PTN-201ENST00000348225 FHL1Q13642 323 aa16.94■□□□□ 0.3
PTN-201ENST00000348225 ACER2Q5QJU3 275 aa16.94■□□□□ 0.3
PTN-201ENST00000348225 PRAMEF20Q5VT98 475 aa16.94■□□□□ 0.3
PTN-201ENST00000348225 DPY19L2P2Q6ZN68 376 aa16.94■□□□□ 0.3
PTN-201ENST00000348225 ADGRG3Q86Y34 549 aa16.94■□□□□ 0.3
PTN-201ENST00000348225 MRGPRX4Q96LA9 322 aa16.94■□□□□ 0.3
PTN-201ENST00000348225 FER1L6-AS2Q96M78 137 aa16.94■□□□□ 0.3
PTN-201ENST00000348225 ENKD1Q9H0I2 346 aa16.94■□□□□ 0.3
PTN-201ENST00000348225 CMC2Q9NRP2 79 aa16.94■□□□□ 0.3
PTN-201ENST00000348225 WDR70Q9NW82 654 aa16.94■□□□□ 0.3
PTN-201ENST00000348225 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.94■□□□□ 0.3
PTN-201ENST00000348225 VDAC3Q9Y277 283 aa16.94■□□□□ 0.3
PTN-201ENST00000348225 HIF3AQ9Y2N7 669 aa16.94■□□□□ 0.3
PTN-201ENST00000348225 AHCTF1Q8WYP5 2266 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms