RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 AP1ARQ63HQ0 302 aa7.83□□□□□ -1.16
PRKCH-208ENST00000553846 NOXRED1Q6NXP6 359 aa7.83□□□□□ -1.16
PRKCH-208ENST00000553846 LRIG3Q6UXM1 1119 aa7.83□□□□□ -1.16
PRKCH-208ENST00000553846 TRIM46Q7Z4K8 759 aa7.83□□□□□ -1.16
PRKCH-208ENST00000553846 C1QL2Q7Z5L3 287 aa7.83□□□□□ -1.16
PRKCH-208ENST00000553846 CCDC103Q8IW40 242 aa7.83□□□□□ -1.16
PRKCH-208ENST00000553846 CDK20Q8IZL9 346 aa7.83□□□□□ -1.16
PRKCH-208ENST00000553846 ZIC4Q8N9L1 334 aa7.83□□□□□ -1.16
PRKCH-208ENST00000553846 CEP70Q8NHQ1 597 aa7.83□□□□□ -1.16
PRKCH-208ENST00000553846 CDC26Q8NHZ8 85 aa7.83□□□□□ -1.16
PRKCH-208ENST00000553846 UBASH3BQ8TF42 649 aa7.83□□□□□ -1.16
PRKCH-208ENST00000553846 SLC25A43Q8WUT9 341 aaPredicted RBP7.83□□□□□ -1.16
PRKCH-208ENST00000553846 WDR60Q8WVS4 1066 aa7.83□□□□□ -1.16
PRKCH-208ENST00000553846 ST8SIA1Q92185 356 aa7.83□□□□□ -1.16
PRKCH-208ENST00000553846 MRPL24Q96A35 216 aaKnown RBP7.83□□□□□ -1.16
PRKCH-208ENST00000553846 FAM120BQ96EK7 910 aaKnown RBP7.83□□□□□ -1.16
PRKCH-208ENST00000553846 C1orf147Q96MC9 270 aaPredicted RBP7.83□□□□□ -1.16
PRKCH-208ENST00000553846 SLC6A7Q99884 636 aa7.83□□□□□ -1.16
PRKCH-208ENST00000553846 CCDC106Q9BWC9 280 aa7.83□□□□□ -1.16
PRKCH-208ENST00000553846 TMPRSS13Q9BYE2 586 aa7.83□□□□□ -1.16
PRKCH-208ENST00000553846 RAB1BQ9H0U4 201 aa7.83□□□□□ -1.16
PRKCH-208ENST00000553846 PIGUQ9H490 435 aa7.83□□□□□ -1.16
PRKCH-208ENST00000553846 TNFRSF12AQ9NP84 129 aa7.83□□□□□ -1.16
PRKCH-208ENST00000553846 OBP2BQ9NPH6 170 aa7.83□□□□□ -1.16
PRKCH-208ENST00000553846 ACSS1Q9NUB1 689 aaPredicted RBP7.83□□□□□ -1.16
PRKCH-208ENST00000553846 ACER3Q9NUN7 267 aa7.83□□□□□ -1.16
PRKCH-208ENST00000553846 PCDHB14Q9Y5E9 798 aa7.83□□□□□ -1.16
PRKCH-208ENST00000553846 KCNE3Q9Y6H6 103 aa7.83□□□□□ -1.16
PRKCH-208ENST00000553846 NUP214P35658 2090 aaPredicted RBP7.82□□□□□ -1.16
PRKCH-208ENST00000553846 ARPC4-TTLL3A0A0A6YYG9 625 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 hCG_2039718K7EN88 272 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 KLF11O14901 512 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 ZNF264O43296 627 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 RAD51CO43502 376 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 MRPL33O75394 65 aaKnown RBP7.82□□□□□ -1.16
PRKCH-208ENST00000553846 RP2O75695 350 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 NUDT14O95848 222 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 PNPP00491 289 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 IGKV3-15P01624 115 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 HMGN2P05204 90 aaKnown RBP7.82□□□□□ -1.16
PRKCH-208ENST00000553846 ALOX5P09917 674 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 GAAP10253 952 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 UBL4AP11441 157 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 IFNGR1P15260 489 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 PRPH2P23942 346 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 HMOX2P30519 316 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 PRKAG1P54619 331 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 ATP12AP54707 1039 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 LCP2Q13094 533 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 CALCOCO2Q13137 446 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 ANKRD16Q6P6B7 361 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 CASP12Q6UXS9 341 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 THSD4Q6ZMP0 1018 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 LINGO2Q7L985 606 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 FAM169BQ8N8A8 192 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 PSMA8Q8TAA3 256 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 PIGXQ8TBF5 258 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 DVL3Q92997 716 aaPredicted RBP7.82□□□□□ -1.16
PRKCH-208ENST00000553846 TMEM45BQ96B21 275 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 LRRC37BQ96QE4 947 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 JMJD8Q96S16 334 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 GSTO2Q9H4Y5 243 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 ACSS3Q9H6R3 686 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 GPATCH2Q9NW75 528 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 FBXO9Q9UK97 447 aaPredicted RBP7.82□□□□□ -1.16
PRKCH-208ENST00000553846 DTNAQ9Y4J8 743 aa7.82□□□□□ -1.16
PRKCH-208ENST00000553846 TRAV20A0A0B4J274 112 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 FAM187AA6NFU0 413 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 GOLGA6L6A8MZA4 724 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 DEAF1O75398 565 aaPredicted RBP7.81□□□□□ -1.16
PRKCH-208ENST00000553846 RSL1D1O76021 490 aaKnown RBP7.81□□□□□ -1.16
PRKCH-208ENST00000553846 SUPT7LO94864 414 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 TFP02787 698 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 CELA3BP08861 270 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 SDC1P18827 310 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 THBS4P35443 961 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 PRKAA2P54646 552 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 PKNOX1P55347 436 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 FOXL1Q12952 345 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 CBFBQ13951 182 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 LASP1Q14847 261 aaKnown RBP7.81□□□□□ -1.16
PRKCH-208ENST00000553846 ZNF141Q15928 474 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 TBRG1Q3YBR2 411 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 ATP6AP1LQ52LC2 224 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 DCST2Q5T1A1 773 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 PDZK1Q5T2W1 519 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 CDC73Q6P1J9 531 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 OR51F2Q8NH61 342 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 MAGEE2Q8TD90 523 aaPredicted RBP7.81□□□□□ -1.16
PRKCH-208ENST00000553846 BCL2L2Q92843 193 aaPredicted RBP7.81□□□□□ -1.16
PRKCH-208ENST00000553846 LRRC58Q96CX6 371 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 MRRFQ96E11 262 aaKnown RBP7.81□□□□□ -1.16
PRKCH-208ENST00000553846 L3HYPDHQ96EM0 354 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 SUCNR1Q9BXA5 334 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 OR11A1Q9GZK7 315 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 NMUR2Q9GZQ4 415 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 LAT2Q9GZY6 243 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 HOXD1Q9GZZ0 328 aa7.81□□□□□ -1.16
PRKCH-208ENST00000553846 CDC42EP4Q9H3Q1 356 aaKnown RBP7.81□□□□□ -1.16
PRKCH-208ENST00000553846 SERHL2Q9H4I8 314 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms