RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 ZNF226Q9NYT6 803 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 KLRF1Q9NZS2 232 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 SELENONQ9NZV5 590 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 RNF6Q9Y252 685 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 IGLV3-32A0A0A0MS00 114 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 DCDC2BA2VCK2 349 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 TP53I11O14683 189 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 WBP4O75554 376 aaKnown RBP9.86□□□□□ -0.83
LINC01550-206ENST00000556462 NUDT14O95848 222 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 SMIM18P0DKX4 95 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 PNMTP11086 282 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 GABRB1P18505 474 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 NUP107P57740 925 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 FXYD6P3P58550 94 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 EGR4Q05215 589 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 CRYZQ08257 329 aaKnown RBP9.86□□□□□ -0.83
LINC01550-206ENST00000556462 SNTA1Q13424 505 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 QPRTQ15274 297 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 INPP5JQ15735 1006 aaPredicted RBP9.86□□□□□ -0.83
LINC01550-206ENST00000556462 RSPO4Q2I0M5 234 aaPredicted RBP9.86□□□□□ -0.83
LINC01550-206ENST00000556462 ACER2Q5QJU3 275 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 C12orf73Q69YU5 71 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 ACSM5Q6NUN0 579 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 DND1Q8IYX4 353 aaKnown RBP9.86□□□□□ -0.83
LINC01550-206ENST00000556462 TMEM156Q8N614 296 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 PAQR8Q8TEZ7 354 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 APH1BQ8WW43 257 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 HDAC2Q92769 488 aaKnown RBP9.86□□□□□ -0.83
LINC01550-206ENST00000556462 KIAA1143Q96AT1 154 aaPredicted RBP9.86□□□□□ -0.83
LINC01550-206ENST00000556462 THOC3Q96J01 351 aaKnown RBP9.86□□□□□ -0.83
LINC01550-206ENST00000556462 SECISBP2Q96T21 854 aaKnown RBP9.86□□□□□ -0.83
LINC01550-206ENST00000556462 C12orf10Q9HB07 376 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 PROK2Q9HC23 129 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 CPNE5Q9HCH3 593 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 MED11Q9P086 117 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 SCOCQ9UIL1 159 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 OSGIN1Q9UJX0 560 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 TMEM5Q9Y2B1 443 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 WIF1Q9Y5W5 379 aa9.86□□□□□ -0.83
LINC01550-206ENST00000556462 DOCK10Q96BY6 2186 aa9.85□□□□□ -0.83
LINC01550-206ENST00000556462 ANKUB1A6NFN9 424 aa9.85□□□□□ -0.83
LINC01550-206ENST00000556462 ENO4A6NNW6 628 aa9.85□□□□□ -0.83
LINC01550-206ENST00000556462 M0R129 80 aa9.85□□□□□ -0.83
LINC01550-206ENST00000556462 PTP4A3O75365 173 aa9.85□□□□□ -0.83
LINC01550-206ENST00000556462 SMNDC1O75940 238 aaKnown RBP eCLIP9.85□□□□□ -0.83
LINC01550-206ENST00000556462 CCL3P10147 92 aa9.85□□□□□ -0.83
LINC01550-206ENST00000556462 CRHBPP24387 322 aa9.85□□□□□ -0.83
LINC01550-206ENST00000556462 SRSF6Q13247 344 aaKnown RBP9.85□□□□□ -0.83
LINC01550-206ENST00000556462 FHL1Q13642 323 aa9.85□□□□□ -0.83
LINC01550-206ENST00000556462 KCTD21Q4G0X4 260 aa9.85□□□□□ -0.83
LINC01550-206ENST00000556462 JMJD6Q6NYC1 403 aaPredicted RBP9.85□□□□□ -0.83
LINC01550-206ENST00000556462 ZNF620Q6ZNG0 422 aa9.85□□□□□ -0.83
LINC01550-206ENST00000556462 CCDC103Q8IW40 242 aa9.85□□□□□ -0.83
LINC01550-206ENST00000556462 CDK20Q8IZL9 346 aa9.85□□□□□ -0.83
LINC01550-206ENST00000556462 IQCF1Q8N6M8 205 aa9.85□□□□□ -0.83
LINC01550-206ENST00000556462 TMEM43Q9BTV4 400 aa9.85□□□□□ -0.83
LINC01550-206ENST00000556462 SLC19A3Q9BZV2 496 aa9.85□□□□□ -0.83
LINC01550-206ENST00000556462 ENKD1Q9H0I2 346 aa9.85□□□□□ -0.83
LINC01550-206ENST00000556462 TAS2R10Q9NYW0 307 aa9.85□□□□□ -0.83
LINC01550-206ENST00000556462 SIGLEC7Q9Y286 467 aa9.85□□□□□ -0.83
LINC01550-206ENST00000556462 LOC400499M0QZD8 3231 aa9.85□□□□□ -0.83
LINC01550-206ENST00000556462 TRABD2BA6NFA1 517 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 UNC119BA6NIH7 251 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 ELOA3DA6NLF2 546 aaPredicted RBP9.84□□□□□ -0.83
LINC01550-206ENST00000556462 CDC40O60508 579 aaKnown RBP eCLIP9.84□□□□□ -0.83
LINC01550-206ENST00000556462 MSX1P28360 303 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 CDH15P55291 814 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 SUMO3P55854 103 aaPredicted RBP9.84□□□□□ -0.83
LINC01550-206ENST00000556462 CXCR4P61073 352 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 EFNB1P98172 346 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 GINS1Q14691 196 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 SMN1Q16637 294 aaKnown RBP9.84□□□□□ -0.83
LINC01550-206ENST00000556462 ELOA3BQ3SY89 546 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 RBM48Q5RL73 367 aaKnown RBP9.84□□□□□ -0.83
LINC01550-206ENST00000556462 ATP1A1-AS1Q5TC04 95 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 PRAMEF20Q5VT98 475 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 BROXQ5VW32 411 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 MDGA2Q7Z553 956 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 VASH2Q86V25 355 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 ZNF227Q86WZ6 799 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 ADGRG3Q86Y34 549 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 DEPDC4Q8N2C3 294 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 CLDN22Q8N7P3 220 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 WDSUB1Q8N9V3 476 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 ELOA3Q8NG57 546 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 SGCZQ96LD1 299 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 NPAS1Q99742 590 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 ANGPTL4Q9BY76 406 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 ADNPQ9H2P0 1102 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 SLC25A19Q9HC21 320 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 SDHAF3Q9NRP4 125 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 HPF1Q9NWY4 346 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 SPTBN2O15020 2390 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 CNTRLQ7Z7A1 2325 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 EFCAB9A8MZ26 197 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 LRRN3E7EW58 273 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 ETV2O00321 342 aaPredicted RBP9.84□□□□□ -0.83
LINC01550-206ENST00000556462 IGF2P01344 180 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 CCDC159P0C7I6 412 aa9.84□□□□□ -0.83
LINC01550-206ENST00000556462 SAGP10523 405 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms