RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 COL4A1P02462 1669 aa3.59□□□□□ -1.84
LSM2-211ENST00000475835 PDCD11Q14690 1871 aaKnown RBP3.58□□□□□ -1.84
LSM2-211ENST00000475835 TGIF2-C20orf24A0A0A6YYL0 155 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 A0A0U1RQF3 1178 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 TRAPPC13A5PLN9 417 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 CXorf65A6NEN9 183 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 GLOD5A6NK44 160 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 OR2AG2A6NM03 316 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 DISC1C4P0D8 188 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 RPL36A-HNRNPH2H7BZ11 118 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 CBX4O00257 560 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 KCNK3O14649 394 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 ANKRD28O15084 1053 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 EPHB6O15197 1021 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 TCF21O43680 179 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 CDC40O60508 579 aaKnown RBP eCLIP3.58□□□□□ -1.84
LSM2-211ENST00000475835 WDR1O75083 606 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 RP2O75695 350 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 PSMD10O75832 226 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 KDM4BO94953 1096 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 BRI3O95415 125 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 TOMM40O96008 361 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 CST4P01036 141 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 TGFB1P01137 390 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 C1QCP02747 245 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 MT-ND4LP03901 98 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 HMBSP08397 361 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 CFHP08603 1231 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 IL6RP08887 468 aaPredicted RBP3.58□□□□□ -1.84
LSM2-211ENST00000475835 NMBP08949 121 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 HOXB5P09067 269 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 SPATA31C1P0DKV0 1188 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 HKR1P10072 659 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 CETPP11597 493 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 CYP4B1P13584 511 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 ITGA4P13612 1032 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 CPN1P15169 458 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 RHOQP17081 205 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 HOXA5P20719 270 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 CRHBPP24387 322 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 AK4P27144 223 aaPredicted RBP3.58□□□□□ -1.84
LSM2-211ENST00000475835 ITPKBP27987 946 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 PSMB5P28074 263 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 CST5P28325 142 aaPredicted RBP3.58□□□□□ -1.84
LSM2-211ENST00000475835 SSTR5P35346 364 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 GGT5P36269 586 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 LIPAP38571 399 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 RPS9P46781 194 aaKnown RBP3.58□□□□□ -1.84
LSM2-211ENST00000475835 PTTG1IPP53801 180 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 AQP5P55064 265 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 WDR4P57081 412 aaKnown RBP3.58□□□□□ -1.84
LSM2-211ENST00000475835 ST8SIA6P61647 398 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 BTG1P62324 171 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 SH3BP2P78314 561 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 ADARB1P78563 741 aaKnown RBP3.58□□□□□ -1.84
LSM2-211ENST00000475835 SHC2P98077 582 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 FKBP3Q00688 224 aaKnown RBP3.58□□□□□ -1.84
LSM2-211ENST00000475835 MS4A2Q01362 244 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 DEFA5Q01523 94 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 BDH1Q02338 343 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 CACNB1Q02641 598 aaPredicted RBP3.58□□□□□ -1.84
LSM2-211ENST00000475835 KLF10Q13118 480 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 SRSF6Q13247 344 aaKnown RBP3.58□□□□□ -1.84
LSM2-211ENST00000475835 SKP2Q13309 424 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 PMS2P11Q13670 270 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 SLBPQ14493 270 aaKnown RBP eCLIP3.58□□□□□ -1.84
LSM2-211ENST00000475835 NEDD8Q15843 81 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 HYAL4Q2M3T9 481 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 PRTGQ2VWP7 1150 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 AMZ1Q400G9 498 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 PYCR3Q53H96 274 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 RAB41Q5JT25 222 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 COL5A1-AS1Q5SY13 56 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 CATSPEREQ5SY80 951 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 AKR1C8PQ5T2L2 129 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 LGSNQ5TDP6 509 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 SUSD4Q5VX71 490 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 SAMD13Q5VXD3 122 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 XAF1Q6GPH4 301 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 CD300LDQ6UXZ3 194 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 Q6ZPB1 254 aaPredicted RBP3.58□□□□□ -1.84
LSM2-211ENST00000475835 LANCL3Q6ZV70 420 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 NRARPQ7Z6K4 114 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 ABI3BPQ7Z7G0 1075 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 RBM23Q86U06 439 aaKnown RBP3.58□□□□□ -1.84
LSM2-211ENST00000475835 LINC01551Q86U37 167 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 P2RY8Q86VZ1 359 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 PTOV1Q86YD1 416 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 CRLF3Q8IUI8 442 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 FUNDC1Q8IVP5 155 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 PDZD9Q8IXQ8 264 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 MMP21Q8N119 569 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 SLC34A3Q8N130 599 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 Q8N402 240 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 PARP16Q8N5Y8 322 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 TMEM156Q8N614 296 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 ZBTB2Q8N680 514 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 RNF152Q8N8N0 203 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 FADS6Q8N9I5 356 aa3.58□□□□□ -1.84
LSM2-211ENST00000475835 FAM98AQ8NCA5 519 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms