RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Uba52P62984 128 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gcnt7Q3V3K7 433 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Fam173aQ501J2 229 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Sdc3Q64519 442 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr1472Q7TQQ9 314 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Vmn1r200Q8R281 312 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr441Q8VFS5 310 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Zbtb8aQ9CWH1 434 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Ly6kQ9CWP4 154 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Dkkl1Q9QZL9 230 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Nprl2Q9WUE4 380 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gm20547B8JJN0 1276 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Ahnak2E9PYB0 1738 aaKnown RBP13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr31E9Q3K2 317 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gm20715E9Q3L7 95 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 5730507C01RikJ3QPX0 416 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 CfbP04186 761 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 C5P06684 1680 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gp6P0C191 313 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Hnf1aP22361 628 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 PfkmP47857 780 aaKnown RBP13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Tas2r120Q7M721 295 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr1115Q7TR53 326 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Zer1Q80ZJ6 779 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Pithd1Q8BWR2 211 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Tmem163Q8C996 288 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Cldnd1Q9CQX5 253 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Tmem176bQ9R1Q6 263 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Ms4a4aA0A087WRT7 236 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gm3676D3Z236 184 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Rarres1F6ZIS7 283 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Zfp994J3QM38 661 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gm3573L7N292 184 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Cyp1a2P00186 513 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Eci1P42125 289 aaKnown RBP13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Wdr5P61965 334 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Dlx5P70396 289 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 SgcaP82350 387 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gm1123Q1RME4 390 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 NrarpQ91ZA8 114 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Sfxn5Q925N0 342 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 1700001F09RikQ9DAR5 184 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Stub1Q9WUD1 304 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 ClppO88696 272 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 P06335 190 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 H2-D1P14427 368 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Wnt7bP28047 349 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Zdhhc2P59267 366 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 ElocP83940 112 aaKnown RBP13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Dcp1bQ3U564 578 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Grm7Q68ED2 915 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Rnf170Q8CBG9 286 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Pramef8Q8CE24 480 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Slco3a1Q8R3L5 710 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Lmcd1Q8VEE1 365 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr1504Q8VFQ4 315 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Spns2Q91VM4 549 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Clstn3Q99JH7 956 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Pbx4Q99NE9 378 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Prss16Q9QXE5 509 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gab1Q9QYY0 695 aa13.18□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Map2P20357 1828 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Slc37a4A0A1L1SUI3 450 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Zfp619G3X9T2 1161 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Shisa8J3QNX5 399 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 F2rl3O88634 396 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 HbzP06467 142 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Tfap2aP34056 437 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Rab5cP35278 216 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Cbr1P48758 277 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Clec10aP49300 304 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Eef1a2P62631 463 aaKnown RBP13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Shkbp1Q6P7W2 704 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Sox11Q7M6Y2 395 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Arrb1Q8BWG8 418 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Arpc5Q9CPW4 151 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 ScelQ9EQG3 652 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 D430041D05RikF6ZGR6 1678 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Zfp937A2ANU7 503 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Rpl3lE9PWZ3 407 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Catsperg1E9Q355 1151 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 BlkP16277 499 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Cyb5aP56395 134 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Rab3aP63011 220 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Hepacam2Q4VAH7 463 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Dtx3Q80V91 347 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Poldip3Q8BG81 420 aaKnown RBP13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Cdt1Q8R4E9 557 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr970Q8VFN3 311 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr1141Q8VFQ7 311 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Rbm7Q9CQT2 265 aaKnown RBP13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Twsg1Q9EP52 222 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Mmp19Q9JHI0 527 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Cdc34bA0A140T8I4 237 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gm5678A0A1B0GRG8 277 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Olfr115B2RTB9 312 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Hsd17b12O70503 312 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 CryzP47199 331 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Gabrb3P63080 473 aa13.17□□□□□ -0.3
Col3a1-201ENSMUST00000087883 Has2P70312 552 aa13.17□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms