RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 P2RX2Q9UBL9 471 aa16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 GPC6Q9Y625 555 aaPredicted RBP16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 MED12LQ86YW9 2145 aa16.78■□□□□ 0.28
PPP4R1-215ENST00000580182 CACNA1DQ01668 2161 aa16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 TRBV5-3A0A0A0MS03 114 aa16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 A0A1W2PP18 115 aa16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 TNFSF11O14788 317 aa16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 DNAJA2O60884 412 aa16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 ADAM11O75078 769 aa16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 NTN1O95631 604 aa16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 TROVE2P10155 538 aaKnown RBP eCLIP16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 RPS4Y1P22090 263 aaKnown RBP16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 SFTPDP35247 375 aa16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 MDH1P40925 334 aaKnown RBP16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 EIF1P41567 113 aaKnown RBP16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 ARFIP2P53365 341 aa16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 RPS3AP61247 264 aaKnown RBP16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 SGCBQ16585 318 aa16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 MCEMP1Q8IX19 187 aa16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 ZNF295-AS1Q8N0V1 137 aa16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 LILRA2Q8N149 483 aa16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 ATP6V1C2Q8NEY4 427 aa16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 OR10D3Q8NH80 312 aa16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 OIT3Q8WWZ8 545 aa16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 CNOT9Q92600 299 aaKnown RBP16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 MAL2Q969L2 176 aa16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 TMEM19Q96HH6 336 aa16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 SPOCK3Q9BQ16 436 aa16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 TREX2Q9BQ50 279 aaPredicted RBP16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 IKZF5Q9H5V7 419 aa16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 MTHFD2LQ9H903 347 aaPredicted RBP16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 SLC35A3Q9Y2D2 325 aa16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 CENPEQ02224 2701 aa16.77■□□□□ 0.28
PPP4R1-215ENST00000580182 CXCL13O43927 109 aa16.76■□□□□ 0.27
PPP4R1-215ENST00000580182 AQP8O94778 261 aa16.76■□□□□ 0.27
PPP4R1-215ENST00000580182 ADH6P28332 368 aa16.76■□□□□ 0.27
PPP4R1-215ENST00000580182 RYKP34925 604 aa16.76■□□□□ 0.27
PPP4R1-215ENST00000580182 OPRM1P35372 400 aa16.76■□□□□ 0.27
PPP4R1-215ENST00000580182 MAGEA8P43361 318 aa16.76■□□□□ 0.27
PPP4R1-215ENST00000580182 SLC6A8P48029 635 aa16.76■□□□□ 0.27
PPP4R1-215ENST00000580182 SLC25A53Q5H9E4 307 aa16.76■□□□□ 0.27
PPP4R1-215ENST00000580182 METTL21CQ5VZV1 264 aa16.76■□□□□ 0.27
PPP4R1-215ENST00000580182 PPP4R4Q6NUP7 873 aa16.76■□□□□ 0.27
PPP4R1-215ENST00000580182 DLEU7Q6UYE1 221 aa16.76■□□□□ 0.27
PPP4R1-215ENST00000580182 RETREG3Q86VR2 466 aa16.76■□□□□ 0.27
PPP4R1-215ENST00000580182 VRK2Q86Y07 508 aa16.76■□□□□ 0.27
PPP4R1-215ENST00000580182 WDR60Q8WVS4 1066 aa16.76■□□□□ 0.27
PPP4R1-215ENST00000580182 MRGPRX4Q96LA9 322 aa16.76■□□□□ 0.27
PPP4R1-215ENST00000580182 TRIM8Q9BZR9 551 aa16.76■□□□□ 0.27
PPP4R1-215ENST00000580182 STOML1Q9UBI4 398 aa16.76■□□□□ 0.27
PPP4R1-215ENST00000580182 INTS1Q8N201 2190 aaKnown RBP16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 DSPPQ9NZW4 1301 aa16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 PKDREJQ9NTG1 2253 aa16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 A0A1W2PNV4 684 aa16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 EEF1E1-BLOC1S5C9J1V9 151 aa16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 ETV2O00321 342 aaPredicted RBP16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 ADAMDEC1O15204 470 aa16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 EEF1E1O43324 174 aaKnown RBP16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 TNFSF13O75888 250 aa16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 IL18BPO95998 194 aa16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 IL7RP16871 459 aa16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 ME2P23368 584 aa16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 ELK4P28324 431 aa16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 ASCL1P50553 236 aa16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 CRISP3P54108 245 aa16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 SESN3P58005 492 aa16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 ESPNLQ6ZVH7 1005 aa16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 DMRTC2Q8IXT2 367 aaPredicted RBP16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 OR2V1Q8NHB1 315 aa16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 KLHL15Q96M94 604 aa16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 ZFP3Q96NJ6 502 aa16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 SFXN3Q9BWM7 321 aa16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 RLIMQ9NVW2 624 aa16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 DNAJB12Q9NXW2 375 aaKnown RBP16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 LEF1Q9UJU2 399 aaPredicted RBP16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 NDUFAF1Q9Y375 327 aa16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 ZNF175Q9Y473 711 aa16.75■□□□□ 0.27
PPP4R1-215ENST00000580182 SYT5O00445 386 aa16.74■□□□□ 0.27
PPP4R1-215ENST00000580182 AP3D1O14617 1153 aa16.74■□□□□ 0.27
PPP4R1-215ENST00000580182 DBIP07108 87 aaKnown RBP16.74■□□□□ 0.27
PPP4R1-215ENST00000580182 BMP2P12643 396 aa16.74■□□□□ 0.27
PPP4R1-215ENST00000580182 NID1P14543 1247 aa16.74■□□□□ 0.27
PPP4R1-215ENST00000580182 PGCP20142 388 aa16.74■□□□□ 0.27
PPP4R1-215ENST00000580182 UQCRC1P31930 480 aa16.74■□□□□ 0.27
PPP4R1-215ENST00000580182 FADDQ13158 208 aa16.74■□□□□ 0.27
PPP4R1-215ENST00000580182 TMEM176BQ3YBM2 270 aaPredicted RBP16.74■□□□□ 0.27
PPP4R1-215ENST00000580182 MRPL2Q5T653 305 aaKnown RBP16.74■□□□□ 0.27
PPP4R1-215ENST00000580182 HBMQ6B0K9 141 aa16.74■□□□□ 0.27
PPP4R1-215ENST00000580182 VWA1Q6PCB0 445 aa16.74■□□□□ 0.27
PPP4R1-215ENST00000580182 ZNF836Q6ZNA1 936 aa16.74■□□□□ 0.27
PPP4R1-215ENST00000580182 LUZP2Q86TE4 346 aa16.74■□□□□ 0.27
PPP4R1-215ENST00000580182 OR52P1PQ8NH57 321 aa16.74■□□□□ 0.27
PPP4R1-215ENST00000580182 OSTF1Q92882 214 aa16.74■□□□□ 0.27
PPP4R1-215ENST00000580182 ZNF317Q96PQ6 595 aaPredicted RBP16.74■□□□□ 0.27
PPP4R1-215ENST00000580182 RAD21L1Q9H4I0 556 aa16.74■□□□□ 0.27
PPP4R1-215ENST00000580182 RNF122Q9H9V4 155 aa16.74■□□□□ 0.27
PPP4R1-215ENST00000580182 A4GALTQ9NPC4 353 aa16.74■□□□□ 0.27
PPP4R1-215ENST00000580182 EXOSC3Q9NQT5 275 aaKnown RBP16.74■□□□□ 0.27
PPP4R1-215ENST00000580182 JKAMPQ9P055 326 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms