RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 MAP3K8P41279 467 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 FOXG1P55316 489 aaPredicted RBP12.17□□□□□ -0.46
LINC00642-202ENST00000442515 SLC25A3Q00325 362 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 SELENBP1Q13228 472 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 SCGB2A2Q13296 93 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 TOMM34Q15785 309 aaPredicted RBP12.17□□□□□ -0.46
LINC00642-202ENST00000442515 GABRA6Q16445 453 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 MIDNQ504T8 468 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 LRRC8AQ8IWT6 810 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 PLD6Q8N2A8 252 aaKnown RBP12.17□□□□□ -0.46
LINC00642-202ENST00000442515 SLC35F6Q8N357 371 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 WDR31Q8NA23 367 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 TOR1AIP2Q8NFQ8 470 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 ZNF483Q8TF39 744 aaPredicted RBP12.17□□□□□ -0.46
LINC00642-202ENST00000442515 APH1AQ96BI3 265 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 MUS81Q96NY9 551 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 MIEF1Q9NQG6 463 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 UBQLN4Q9NRR5 601 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 GRID1Q9ULK0 1009 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 TMCO1Q9UM00 188 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 PCDHB10Q9UN67 800 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 MOKQ9UQ07 419 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 PCDHGB1Q9Y5G3 927 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 GPC6Q9Y625 555 aaPredicted RBP12.17□□□□□ -0.46
LINC00642-202ENST00000442515 EIF3HO15372 352 aaKnown RBP eCLIP12.16□□□□□ -0.46
LINC00642-202ENST00000442515 OIP5O43482 229 aa12.16□□□□□ -0.46
LINC00642-202ENST00000442515 SMIM24O75264 130 aa12.16□□□□□ -0.46
LINC00642-202ENST00000442515 KCNK2O95069 426 aa12.16□□□□□ -0.46
LINC00642-202ENST00000442515 SNUPNO95149 360 aaKnown RBP12.16□□□□□ -0.46
LINC00642-202ENST00000442515 ITGA5P08648 1049 aa12.16□□□□□ -0.46
LINC00642-202ENST00000442515 GSTA2P09210 222 aa12.16□□□□□ -0.46
LINC00642-202ENST00000442515 PRKCAP17252 672 aa12.16□□□□□ -0.46
LINC00642-202ENST00000442515 STX2P32856 288 aa12.16□□□□□ -0.46
LINC00642-202ENST00000442515 RNF144AP50876 292 aaPredicted RBP12.16□□□□□ -0.46
LINC00642-202ENST00000442515 ZNF763Q0D2J5 394 aa12.16□□□□□ -0.46
LINC00642-202ENST00000442515 NAB1Q13506 487 aa12.16□□□□□ -0.46
LINC00642-202ENST00000442515 CCNIQ14094 377 aa12.16□□□□□ -0.46
LINC00642-202ENST00000442515 TRIP10Q15642 601 aa12.16□□□□□ -0.46
LINC00642-202ENST00000442515 PDCD2Q16342 344 aaPredicted RBP12.16□□□□□ -0.46
LINC00642-202ENST00000442515 VPS26BQ4G0F5 336 aa12.16□□□□□ -0.46
LINC00642-202ENST00000442515 OR7E24Q6IFN5 339 aa12.16□□□□□ -0.46
LINC00642-202ENST00000442515 GALNT18Q6P9A2 607 aa12.16□□□□□ -0.46
LINC00642-202ENST00000442515 CBLN3Q6UW01 205 aa12.16□□□□□ -0.46
LINC00642-202ENST00000442515 FBF1Q8TES7 1133 aa12.16□□□□□ -0.46
LINC00642-202ENST00000442515 ZNF524Q96C55 264 aa12.16□□□□□ -0.46
LINC00642-202ENST00000442515 VPS11Q9H270 941 aa12.16□□□□□ -0.46
LINC00642-202ENST00000442515 KCNF1Q9H3M0 494 aa12.16□□□□□ -0.46
LINC00642-202ENST00000442515 ASB6Q9NWX5 421 aa12.16□□□□□ -0.46
LINC00642-202ENST00000442515 EMC3Q9P0I2 261 aa12.16□□□□□ -0.46
LINC00642-202ENST00000442515 MALT1Q9UDY8 824 aa12.16□□□□□ -0.46
LINC00642-202ENST00000442515 ARFGEF3Q5TH69 2177 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 IGKV3D-15A0A087WSY6 115 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 H6PDO95479 791 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 KRT6AP02538 564 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 KRT6BP04259 564 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 ANXA4P09525 319 aaPredicted RBP12.15□□□□□ -0.46
LINC00642-202ENST00000442515 IFI6P09912 130 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 ACP2P11117 423 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 PRPS2P11908 318 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 SERPINF1P36955 418 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 GSTM5P46439 218 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 KRT6CP48668 564 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 HTR6P50406 440 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 SERPINB8P50452 374 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 ARFIP2P53365 341 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 SUMO3P55854 103 aaPredicted RBP12.15□□□□□ -0.46
LINC00642-202ENST00000442515 C2orf80Q0P641 193 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 ABLIM2Q6H8Q1 611 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 USP43Q70EL4 1123 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 SPATA19Q7Z5L4 167 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 GLCCI1Q86VQ1 547 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 CDRT4Q8N9R6 151 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 OR6Y1Q8NGX8 325 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 PHOSPHO1Q8TCT1 267 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 MRGPRX4Q96LA9 322 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 TAS2R7Q9NYW3 318 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 ICAM5Q9UMF0 924 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 NOSIPQ9Y314 301 aaKnown RBP12.15□□□□□ -0.46
LINC00642-202ENST00000442515 ACTL7BQ9Y614 415 aa12.15□□□□□ -0.46
LINC00642-202ENST00000442515 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 B9A039 149 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 PDLIM1O00151 329 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 RBP1P09455 135 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 DAOP14920 347 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 PGCP20142 388 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 TYK2P29597 1187 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 LCN1P31025 176 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 LIMS1P48059 325 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 PPOXP50336 477 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 IDH3GP51553 393 aaPredicted RBP12.14□□□□□ -0.47
LINC00642-202ENST00000442515 P2RX1P51575 399 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 BTKQ06187 659 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 HSPB3Q12988 150 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 DUSP5Q16690 384 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 CCNJQ5T5M9 372 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 C9orf135Q5VTT2 229 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 FAM71E1Q6IPT2 247 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 C3orf33Q6P1S2 294 aa12.14□□□□□ -0.47
LINC00642-202ENST00000442515 SHQ1Q6PI26 577 aaKnown RBP12.14□□□□□ -0.47
LINC00642-202ENST00000442515 SHISA2Q6UWI4 295 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms