RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 INTS1Q8N201 2190 aaKnown RBP12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 HCFC1P51610 2035 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 AGAP5A6NIR3 686 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ADAM11O75078 769 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ME2P23368 584 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 CTSSP25774 331 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 RYKP34925 604 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 SFTPDP35247 375 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 MDH1P40925 334 aaKnown RBP12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 EIF1P41567 113 aaKnown RBP12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 EEFSECP57772 596 aaKnown RBP12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 IRX1P78414 480 aaPredicted RBP12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 SNTB1Q13884 538 aaKnown RBP12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 PON3Q15166 354 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 SGCBQ16585 318 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 RPS26P11Q5JNZ5 115 aaPredicted RBP12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 PPP4R4Q6NUP7 873 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 MEX3BQ6ZN04 569 aaKnown RBP12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 MCEMP1Q8IX19 187 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 METTL25Q8N6Q8 603 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ACBD4Q8NC06 268 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 FAM71CQ8NEG0 241 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ATP6V1C2Q8NEY4 427 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 OR10D3Q8NH80 312 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 CNOT9Q92600 299 aaKnown RBP12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ADGRG7Q96K78 797 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 IKZF5Q9H5V7 419 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 CCDC134Q9H6E4 229 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 SLC35A3Q9Y2D2 325 aa12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 GPC6Q9Y625 555 aaPredicted RBP12.67□□□□□ -0.38
HLA-DQB1-202ENST00000399079 MED12LQ86YW9 2145 aa12.66□□□□□ -0.38
HLA-DQB1-202ENST00000399079 A0A0J9YW62 118 aa12.66□□□□□ -0.38
HLA-DQB1-202ENST00000399079 TNFSF11O14788 317 aa12.66□□□□□ -0.38
HLA-DQB1-202ENST00000399079 DNAJA2O60884 412 aa12.66□□□□□ -0.38
HLA-DQB1-202ENST00000399079 NTN1O95631 604 aa12.66□□□□□ -0.38
HLA-DQB1-202ENST00000399079 IL7RP16871 459 aa12.66□□□□□ -0.38
HLA-DQB1-202ENST00000399079 IGFBP2P18065 325 aa12.66□□□□□ -0.38
HLA-DQB1-202ENST00000399079 RPS4Y1P22090 263 aaKnown RBP12.66□□□□□ -0.38
HLA-DQB1-202ENST00000399079 MAGEA8P43361 318 aa12.66□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ARFIP2P53365 341 aa12.66□□□□□ -0.38
HLA-DQB1-202ENST00000399079 DLX5P56178 289 aa12.66□□□□□ -0.38
HLA-DQB1-202ENST00000399079 RPS3AP61247 264 aaKnown RBP12.66□□□□□ -0.38
HLA-DQB1-202ENST00000399079 METTL21CQ5VZV1 264 aa12.66□□□□□ -0.38
HLA-DQB1-202ENST00000399079 DLEU7Q6UYE1 221 aa12.66□□□□□ -0.38
HLA-DQB1-202ENST00000399079 P4HA3Q7Z4N8 544 aa12.66□□□□□ -0.38
HLA-DQB1-202ENST00000399079 RETREG3Q86VR2 466 aa12.66□□□□□ -0.38
HLA-DQB1-202ENST00000399079 TMEM19Q96HH6 336 aa12.66□□□□□ -0.38
HLA-DQB1-202ENST00000399079 SPOCK3Q9BQ16 436 aa12.66□□□□□ -0.38
HLA-DQB1-202ENST00000399079 TREX2Q9BQ50 279 aaPredicted RBP12.66□□□□□ -0.38
HLA-DQB1-202ENST00000399079 TRIM8Q9BZR9 551 aa12.66□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.66□□□□□ -0.38
HLA-DQB1-202ENST00000399079 RLIMQ9NVW2 624 aa12.66□□□□□ -0.38
HLA-DQB1-202ENST00000399079 STOML1Q9UBI4 398 aa12.66□□□□□ -0.38
HLA-DQB1-202ENST00000399079 TRBV5-3A0A0A0MS03 114 aa12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 EEF1E1-BLOC1S5C9J1V9 151 aa12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ADAMDEC1O15204 470 aa12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 EEF1E1O43324 174 aaKnown RBP12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 CXCL13O43927 109 aa12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 AQP8O94778 261 aa12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ADH6P28332 368 aa12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 OPRM1P35372 400 aa12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 SLC6A8P48029 635 aa12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 CRISP3P54108 245 aa12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 SESN3P58005 492 aa12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 FADDQ13158 208 aa12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 TMEM176BQ3YBM2 270 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 MRPL2Q5T653 305 aaKnown RBP12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 VRK2Q86Y07 508 aa12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ZNF295-AS1Q8N0V1 137 aa12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 WDR60Q8WVS4 1066 aa12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 OIT3Q8WWZ8 545 aa12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 MRGPRX4Q96LA9 322 aa12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ZNF317Q96PQ6 595 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 DNAJB12Q9NXW2 375 aaKnown RBP12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 NDUFAF1Q9Y375 327 aa12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 DSPPQ9NZW4 1301 aa12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 ABCA12Q86UK0 2595 aa12.65□□□□□ -0.38
HLA-DQB1-202ENST00000399079 TEX15Q9BXT5 2789 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ETV2O00321 342 aaPredicted RBP12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 AP3D1O14617 1153 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ANGPT2O15123 496 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 TNFSF13O75888 250 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 IL18BPO95998 194 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 NID1P14543 1247 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 PGCP20142 388 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ELK4P28324 431 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 UQCRC1P31930 480 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 SLC25A53Q5H9E4 307 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 HBMQ6B0K9 141 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 VWA1Q6PCB0 445 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ESPNLQ6ZVH7 1005 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 LUZP2Q86TE4 346 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 PEX5LQ8IYB4 626 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 OR52P1PQ8NH57 321 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 OR2V1Q8NHB1 315 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 OSTF1Q92882 214 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 KLHL15Q96M94 604 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 ZFP3Q96NJ6 502 aa12.64□□□□□ -0.39
HLA-DQB1-202ENST00000399079 SFXN3Q9BWM7 321 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms