RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 GPIP06744 558 aa16.69■□□□□ 0.26
RFFL-211ENST00000584541 LINGO3P0C6S8 592 aa16.69■□□□□ 0.26
RFFL-211ENST00000584541 HOXB6P17509 224 aaKnown RBP16.69■□□□□ 0.26
RFFL-211ENST00000584541 PGCP20142 388 aa16.69■□□□□ 0.26
RFFL-211ENST00000584541 ACTR3P61158 418 aa16.69■□□□□ 0.26
RFFL-211ENST00000584541 CHRNB3Q05901 458 aa16.69■□□□□ 0.26
RFFL-211ENST00000584541 KPNB1Q14974 876 aaKnown RBP16.69■□□□□ 0.26
RFFL-211ENST00000584541 NRF1Q16656 503 aa16.69■□□□□ 0.26
RFFL-211ENST00000584541 CBLN3Q6UW01 205 aa16.69■□□□□ 0.26
RFFL-211ENST00000584541 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.69■□□□□ 0.26
RFFL-211ENST00000584541 WDSUB1Q8N9V3 476 aa16.69■□□□□ 0.26
RFFL-211ENST00000584541 OR2M3Q8NG83 312 aa16.69■□□□□ 0.26
RFFL-211ENST00000584541 OR5W2Q8NH69 310 aa16.69■□□□□ 0.26
RFFL-211ENST00000584541 SEPHS2Q99611 448 aa16.69■□□□□ 0.26
RFFL-211ENST00000584541 RSPO3Q9BXY4 272 aaPredicted RBP16.69■□□□□ 0.26
RFFL-211ENST00000584541 MAGIXQ9H6Y5 334 aa16.69■□□□□ 0.26
RFFL-211ENST00000584541 TESQ9UGI8 421 aaKnown RBP16.69■□□□□ 0.26
RFFL-211ENST00000584541 ICAM5Q9UMF0 924 aa16.69■□□□□ 0.26
RFFL-211ENST00000584541 TCRBV3S1A0A5B6 114 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 DHRS12A0PJE2 317 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 ANKUB1A6NFN9 424 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 TMEM229AB2RXF0 380 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 ACOT7O00154 380 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 AP3D1O14617 1153 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 OIP5O43482 229 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 FRS3O43559 492 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 BCAS1O75363 584 aaPredicted RBP16.68■□□□□ 0.26
RFFL-211ENST00000584541 RASAL1O95294 804 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 GKN3PP0CG01 181 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 TNFRSF1BP20333 461 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 RYKP34925 604 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 OR1E2P47887 323 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 ZNF41P51814 821 aaPredicted RBP16.68■□□□□ 0.26
RFFL-211ENST00000584541 COPZ1P61923 177 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 INPP5JQ15735 1006 aaPredicted RBP16.68■□□□□ 0.26
RFFL-211ENST00000584541 INAQ16352 499 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 RPUSD3Q6P087 351 aaKnown RBP16.68■□□□□ 0.26
RFFL-211ENST00000584541 COMTD1Q86VU5 262 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 FAM86B1Q8N7N1 296 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 EXD3Q8N9H8 876 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 FADS6Q8N9I5 356 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 ZNF563Q8TA94 476 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 PNPLA2Q96AD5 504 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 SLC25A18Q9H1K4 315 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 PRDM4Q9UKN5 801 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 AURKCQ9UQB9 309 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 PCNX3Q9H6A9 2034 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 CFAP47Q6ZTR5 3102 aa16.68■□□□□ 0.26
RFFL-211ENST00000584541 PINLYPA6NC86 204 aa16.67■□□□□ 0.26
RFFL-211ENST00000584541 C17orf51A8MQB3 221 aa16.67■□□□□ 0.26
RFFL-211ENST00000584541 ITGA2P17301 1181 aa16.67■□□□□ 0.26
RFFL-211ENST00000584541 ERFP50548 548 aa16.67■□□□□ 0.26
RFFL-211ENST00000584541 PLAURQ03405 335 aa16.67■□□□□ 0.26
RFFL-211ENST00000584541 FOXO1Q12778 655 aa16.67■□□□□ 0.26
RFFL-211ENST00000584541 EPS8Q12929 822 aa16.67■□□□□ 0.26
RFFL-211ENST00000584541 CCNIQ14094 377 aa16.67■□□□□ 0.26
RFFL-211ENST00000584541 GANABQ14697 944 aaKnown RBP16.67■□□□□ 0.26
RFFL-211ENST00000584541 TOMM20Q15388 145 aa16.67■□□□□ 0.26
RFFL-211ENST00000584541 SLC6A19Q695T7 634 aa16.67■□□□□ 0.26
RFFL-211ENST00000584541 SLC22A16Q86VW1 577 aa16.67■□□□□ 0.26
RFFL-211ENST00000584541 TEX19Q8NA77 164 aa16.67■□□□□ 0.26
RFFL-211ENST00000584541 ZFP62Q8NB50 900 aaPredicted RBP16.67■□□□□ 0.26
RFFL-211ENST00000584541 OR6T1Q8NGN1 323 aa16.67■□□□□ 0.26
RFFL-211ENST00000584541 TMEM234Q8WY98 164 aa16.67■□□□□ 0.26
RFFL-211ENST00000584541 ARSGQ96EG1 525 aa16.67■□□□□ 0.26
RFFL-211ENST00000584541 WBP1Q96G27 269 aa16.67■□□□□ 0.26
RFFL-211ENST00000584541 GNRHR2Q96P88 292 aa16.67■□□□□ 0.26
RFFL-211ENST00000584541 ZNF559Q9BR84 538 aa16.67■□□□□ 0.26
RFFL-211ENST00000584541 TTTY12Q9BZ98 90 aa16.67■□□□□ 0.26
RFFL-211ENST00000584541 DENND2DQ9H6A0 471 aaPredicted RBP16.67■□□□□ 0.26
RFFL-211ENST00000584541 DKKL1Q9UK85 242 aa16.67■□□□□ 0.26
RFFL-211ENST00000584541 FBXL2Q9UKC9 423 aa16.67■□□□□ 0.26
RFFL-211ENST00000584541 C15orf41Q9Y2V0 281 aa16.67■□□□□ 0.26
RFFL-211ENST00000584541 LRRC3CA6NJW4 275 aa16.66■□□□□ 0.26
RFFL-211ENST00000584541 FAAHO00519 579 aa16.66■□□□□ 0.26
RFFL-211ENST00000584541 FMO6PO60774 539 aa16.66■□□□□ 0.26
RFFL-211ENST00000584541 FABP3P05413 133 aa16.66■□□□□ 0.26
RFFL-211ENST00000584541 RAP2AP10114 183 aa16.66■□□□□ 0.26
RFFL-211ENST00000584541 GDF1P27539 372 aa16.66■□□□□ 0.26
RFFL-211ENST00000584541 IFNA8P32881 189 aa16.66■□□□□ 0.26
RFFL-211ENST00000584541 DSCR4P56555 118 aaPredicted RBP16.66■□□□□ 0.26
RFFL-211ENST00000584541 PLEKHN1Q494U1 663 aaPredicted RBP16.66■□□□□ 0.26
RFFL-211ENST00000584541 NADK2Q4G0N4 442 aa16.66■□□□□ 0.26
RFFL-211ENST00000584541 DEF8Q6ZN54 512 aa16.66■□□□□ 0.26
RFFL-211ENST00000584541 CYP4Z1Q86W10 505 aa16.66■□□□□ 0.26
RFFL-211ENST00000584541 LACC1Q8IV20 430 aa16.66■□□□□ 0.26
RFFL-211ENST00000584541 ADGRG5Q8IZF4 528 aa16.66■□□□□ 0.26
RFFL-211ENST00000584541 GPR119Q8TDV5 335 aa16.66■□□□□ 0.26
RFFL-211ENST00000584541 CANT1Q8WVQ1 401 aa16.66■□□□□ 0.26
RFFL-211ENST00000584541 MCHR1Q99705 422 aa16.66■□□□□ 0.26
RFFL-211ENST00000584541 TRIM2Q9C040 744 aa16.66■□□□□ 0.26
RFFL-211ENST00000584541 YY1AP1Q9H869 796 aa16.66■□□□□ 0.26
RFFL-211ENST00000584541 TMEM27Q9HBJ8 222 aa16.66■□□□□ 0.26
RFFL-211ENST00000584541 RPS6KB2Q9UBS0 482 aa16.66■□□□□ 0.26
RFFL-211ENST00000584541 FAM32AQ9Y421 112 aaKnown RBP16.66■□□□□ 0.26
RFFL-211ENST00000584541 NCKAP5O14513 1909 aa16.66■□□□□ 0.26
RFFL-211ENST00000584541 LOC400499M0QZD8 3231 aa16.66■□□□□ 0.26
RFFL-211ENST00000584541 A0A087WZY1 265 aa16.65■□□□□ 0.26
RFFL-211ENST00000584541 CDC40O60508 579 aaKnown RBP eCLIP16.65■□□□□ 0.26
RFFL-211ENST00000584541 SEMG1P04279 462 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms