RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 STX18Q9P2W9 335 aaKnown RBP10.19□□□□□ -0.78
SF3B3-205ENST00000564899 KCNE5Q9UJ90 142 aa10.19□□□□□ -0.78
SF3B3-205ENST00000564899 SH3GLB1Q9Y371 365 aa10.19□□□□□ -0.78
SF3B3-205ENST00000564899 RP1L1Q8IWN7 2480 aaPredicted RBP10.19□□□□□ -0.78
SF3B3-205ENST00000564899 CCDC88CQ9P219 2028 aa10.19□□□□□ -0.78
SF3B3-205ENST00000564899 CACNA1DQ01668 2161 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 OR6C70A6NIJ9 312 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 CLDN24A6NM45 220 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 ZNF891A8MT65 544 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-205ENST00000564899 hCG_2039718K7EN88 272 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 SCDO00767 359 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 NKX2-8O15522 239 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 HNRNPRO43390 633 aaKnown RBP10.18□□□□□ -0.78
SF3B3-205ENST00000564899 ZNF354AO60765 605 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-205ENST00000564899 ABCB7O75027 752 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 ICOSLGO75144 302 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 UGT2B11O75310 529 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 ITGA10O75578 1167 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 PRKAR1AP10644 381 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 HPGDP15428 266 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 NAGAP17050 411 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 MAGEA2P43356 314 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 OR1E2P47887 323 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 TMED10P49755 219 aaKnown RBP10.18□□□□□ -0.78
SF3B3-205ENST00000564899 PNLIPRP2P54317 469 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 EEF1A1P68104 462 aaKnown RBP10.18□□□□□ -0.78
SF3B3-205ENST00000564899 CHAF1BQ13112 559 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 AIMP2Q13155 320 aaKnown RBP10.18□□□□□ -0.78
SF3B3-205ENST00000564899 EFR3AQ14156 821 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 GRAMD1BQ3KR37 738 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 RNF220Q5VTB9 566 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 FCRLBQ6BAA4 426 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 JMJD6Q6NYC1 403 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-205ENST00000564899 COMTD1Q86VU5 262 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 RPS19BP1Q86WX3 136 aaKnown RBP10.18□□□□□ -0.78
SF3B3-205ENST00000564899 CARM1Q86X55 608 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 ZDHHC21Q8IVQ6 265 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 PQLC1Q8N2U9 271 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 SLC15A4Q8N697 577 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 ZNF527Q8NB42 609 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 VANGL1Q8TAA9 524 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-205ENST00000564899 BRIX1Q8TDN6 353 aaKnown RBP10.18□□□□□ -0.78
SF3B3-205ENST00000564899 OIT3Q8WWZ8 545 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 THAP4Q8WY91 577 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 THOC3Q96J01 351 aaKnown RBP10.18□□□□□ -0.78
SF3B3-205ENST00000564899 RASL10BQ96S79 203 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 ARHGDIGQ99819 225 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 PKP2Q99959 881 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 RSPO3Q9BXY4 272 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-205ENST00000564899 CDCP1Q9H5V8 836 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 ARMC7Q9H6L4 198 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 ZBTB20Q9HC78 741 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-205ENST00000564899 ATP13A2Q9NQ11 1180 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 UBQLN4Q9NRR5 601 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-205ENST00000564899 KLHL28Q9NXS3 571 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 NKX1-2Q9UD57 310 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-205ENST00000564899 SLC9A8Q9Y2E8 581 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 YARS2Q9Y2Z4 477 aaKnown RBP10.18□□□□□ -0.78
SF3B3-205ENST00000564899 FBN2P35556 2912 aa10.18□□□□□ -0.78
SF3B3-205ENST00000564899 PCSK5Q92824 1860 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 SERINC4A6NH21 518 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 ARGFXA6NJG6 315 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 M0R3H8 397 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 OXSR1O95747 527 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-205ENST00000564899 EPPINO95925 133 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 LGI1O95970 557 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 IFNW1P05000 195 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 FBXO45P0C2W1 286 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 TBXA2RP21731 343 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 FASP25445 335 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 ITGA3P26006 1051 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 CASRP41180 1078 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 SSR4P51571 173 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 RRADP55042 308 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 FBXW4P57775 412 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 SESN3P58005 492 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 MLF1P58340 268 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 VLDLRP98155 873 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 SLC34A1Q06495 639 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 KCNAB2Q13303 367 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 FGFBP1Q14512 234 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 MRPL2Q5T653 305 aaKnown RBP10.17□□□□□ -0.78
SF3B3-205ENST00000564899 DESI1Q6ICB0 168 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 LYPD8Q6UX82 237 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 LILRA2Q8N149 483 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 ARMC10Q8N2F6 343 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 CLIP4Q8N3C7 705 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 SIRT6Q8N6T7 355 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 CLEC1AQ8NC01 280 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 OR5M3Q8NGP4 307 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 OR4C3Q8NH37 302 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 APOBEC4Q8WW27 367 aaKnown RBP10.17□□□□□ -0.78
SF3B3-205ENST00000564899 LRTOMTQ8WZ04 291 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 HGDQ93099 445 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 SPACA9Q96E40 222 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-205ENST00000564899 C7orf34Q96L11 122 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 IL1RAPQ9NPH3 570 aa10.17□□□□□ -0.78
SF3B3-205ENST00000564899 RYDENQ9NUL5 291 aaKnown RBP10.17□□□□□ -0.78
SF3B3-205ENST00000564899 RLIMQ9NVW2 624 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms