RNA–Protein interactions for RNA: ENST00000640507.1

SPIN3-240, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-240ENST00000640507 KRT16P08779 473 aa14.29□□□□□ -0.12
SPIN3-240ENST00000640507 TMIGD3P0DMS9 266 aaPredicted RBP14.29□□□□□ -0.12
SPIN3-240ENST00000640507 HPGDP15428 266 aa14.29□□□□□ -0.12
SPIN3-240ENST00000640507 LBPP18428 481 aa14.29□□□□□ -0.12
SPIN3-240ENST00000640507 EEFSECP57772 596 aaKnown RBP14.29□□□□□ -0.12
SPIN3-240ENST00000640507 KRTAP10-9P60411 292 aa14.29□□□□□ -0.12
SPIN3-240ENST00000640507 TP53BP2Q13625 1128 aa14.29□□□□□ -0.12
SPIN3-240ENST00000640507 PGS1Q32NB8 556 aa14.29□□□□□ -0.12
SPIN3-240ENST00000640507 SPDYE7PQ495Y7 208 aa14.29□□□□□ -0.12
SPIN3-240ENST00000640507 CCNJQ5T5M9 372 aa14.29□□□□□ -0.12
SPIN3-240ENST00000640507 BHLHB9Q6PI77 547 aa14.29□□□□□ -0.12
SPIN3-240ENST00000640507 OR8J2Q8NGG1 315 aa14.29□□□□□ -0.12
SPIN3-240ENST00000640507 CDS1Q92903 461 aa14.29□□□□□ -0.12
SPIN3-240ENST00000640507 RNASE6Q93091 150 aaKnown RBP14.29□□□□□ -0.12
SPIN3-240ENST00000640507 OTUB1Q96FW1 271 aaPredicted RBP14.29□□□□□ -0.12
SPIN3-240ENST00000640507 CHMP6Q96FZ7 201 aa14.29□□□□□ -0.12
SPIN3-240ENST00000640507 ZNF559Q9BR84 538 aa14.29□□□□□ -0.12
SPIN3-240ENST00000640507 DPY30Q9C005 99 aa14.29□□□□□ -0.12
SPIN3-240ENST00000640507 TMBIM4Q9HC24 238 aa14.29□□□□□ -0.12
SPIN3-240ENST00000640507 THAP1Q9NVV9 213 aa14.29□□□□□ -0.12
SPIN3-240ENST00000640507 JKAMPQ9P055 326 aa14.29□□□□□ -0.12
SPIN3-240ENST00000640507 FAF1Q9UNN5 650 aaPredicted RBP14.29□□□□□ -0.12
SPIN3-240ENST00000640507 RNASET2O00584 256 aaKnown RBP14.28□□□□□ -0.12
SPIN3-240ENST00000640507 SCDO00767 359 aa14.28□□□□□ -0.12
SPIN3-240ENST00000640507 POU3F2P20265 443 aaPredicted RBP14.28□□□□□ -0.12
SPIN3-240ENST00000640507 UQCRC1P31930 480 aa14.28□□□□□ -0.12
SPIN3-240ENST00000640507 AGFG1P52594 562 aaKnown RBP14.28□□□□□ -0.12
SPIN3-240ENST00000640507 CLDN15P56746 228 aa14.28□□□□□ -0.12
SPIN3-240ENST00000640507 MAGOHP61326 146 aaKnown RBP14.28□□□□□ -0.12
SPIN3-240ENST00000640507 EEF1A1P68104 462 aaKnown RBP14.28□□□□□ -0.12
SPIN3-240ENST00000640507 FOXF2Q12947 444 aa14.28□□□□□ -0.12
SPIN3-240ENST00000640507 TMEM44Q2T9K0 475 aa14.28□□□□□ -0.12
SPIN3-240ENST00000640507 EEF1A1P5Q5VTE0 462 aa14.28□□□□□ -0.12
SPIN3-240ENST00000640507 OR4F3Q6IEY1 312 aa14.28□□□□□ -0.12
SPIN3-240ENST00000640507 CHMP1BQ7LBR1 199 aa14.28□□□□□ -0.12
SPIN3-240ENST00000640507 MISPQ8IVT2 679 aa14.28□□□□□ -0.12
SPIN3-240ENST00000640507 MEIOBQ8N635 442 aa14.28□□□□□ -0.12
SPIN3-240ENST00000640507 TLCD1Q96CP7 247 aa14.28□□□□□ -0.12
SPIN3-240ENST00000640507 SFXN3Q9BWM7 321 aa14.28□□□□□ -0.12
SPIN3-240ENST00000640507 ACBD3Q9H3P7 528 aa14.28□□□□□ -0.12
SPIN3-240ENST00000640507 ARHGAP21Q5T5U3 1957 aa14.28□□□□□ -0.12
SPIN3-240ENST00000640507 CREBBPQ92793 2442 aa14.28□□□□□ -0.12
SPIN3-240ENST00000640507 APCP25054 2843 aa14.28□□□□□ -0.12
SPIN3-240ENST00000640507 A0A087WZY1 265 aa14.27□□□□□ -0.12
SPIN3-240ENST00000640507 ANKRD28O15084 1053 aa14.27□□□□□ -0.12
SPIN3-240ENST00000640507 SCN2BO60939 215 aa14.27□□□□□ -0.12
SPIN3-240ENST00000640507 SNNO75324 88 aaPredicted RBP14.27□□□□□ -0.12
SPIN3-240ENST00000640507 TNFRSF21O75509 655 aa14.27□□□□□ -0.12
SPIN3-240ENST00000640507 ATP6V1C1P21283 382 aa14.27□□□□□ -0.12
SPIN3-240ENST00000640507 SUCLG1P53597 346 aaKnown RBP14.27□□□□□ -0.12
SPIN3-240ENST00000640507 MYBPHQ13203 477 aa14.27□□□□□ -0.12
SPIN3-240ENST00000640507 OGFOD2Q6N063 350 aa14.27□□□□□ -0.12
SPIN3-240ENST00000640507 PLXDC2Q6UX71 529 aa14.27□□□□□ -0.12
SPIN3-240ENST00000640507 GRAMD2AQ8IUY3 354 aa14.27□□□□□ -0.12
SPIN3-240ENST00000640507 UBQLNLQ8IYU4 475 aa14.27□□□□□ -0.12
SPIN3-240ENST00000640507 CLECL1Q8IZS7 167 aa14.27□□□□□ -0.12
SPIN3-240ENST00000640507 VPS37AQ8NEZ2 397 aa14.27□□□□□ -0.12
SPIN3-240ENST00000640507 OR5M1Q8NGP8 315 aa14.27□□□□□ -0.12
SPIN3-240ENST00000640507 ACTRT2Q8TDY3 377 aa14.27□□□□□ -0.12
SPIN3-240ENST00000640507 TESCQ96BS2 214 aa14.27□□□□□ -0.12
SPIN3-240ENST00000640507 INTS12Q96CB8 462 aaKnown RBP14.27□□□□□ -0.12
SPIN3-240ENST00000640507 HOXD1Q9GZZ0 328 aa14.27□□□□□ -0.12
SPIN3-240ENST00000640507 PCDHGB4Q9UN71 923 aa14.27□□□□□ -0.12
SPIN3-240ENST00000640507 AP4B1Q9Y6B7 739 aa14.27□□□□□ -0.12
SPIN3-240ENST00000640507 KCNE3Q9Y6H6 103 aa14.27□□□□□ -0.12
SPIN3-240ENST00000640507 MED12Q93074 2177 aa14.27□□□□□ -0.13
SPIN3-240ENST00000640507 PRSS51A0A1B0GVH4 220 aa14.26□□□□□ -0.13
SPIN3-240ENST00000640507 DUXAA6NLW8 204 aa14.26□□□□□ -0.13
SPIN3-240ENST00000640507 H3BML4 177 aa14.26□□□□□ -0.13
SPIN3-240ENST00000640507 GMFGO60234 142 aa14.26□□□□□ -0.13
SPIN3-240ENST00000640507 TGM6O95932 706 aa14.26□□□□□ -0.13
SPIN3-240ENST00000640507 KIR2DL3P43628 341 aa14.26□□□□□ -0.13
SPIN3-240ENST00000640507 PHC1P78364 1004 aa14.26□□□□□ -0.13
SPIN3-240ENST00000640507 OCRLQ01968 901 aa14.26□□□□□ -0.13
SPIN3-240ENST00000640507 DPY19L1Q2PZI1 675 aa14.26□□□□□ -0.13
SPIN3-240ENST00000640507 DCST2Q5T1A1 773 aa14.26□□□□□ -0.13
SPIN3-240ENST00000640507 ANXA8L1Q5VT79 327 aa14.26□□□□□ -0.13
SPIN3-240ENST00000640507 ATG16L1Q676U5 607 aa14.26□□□□□ -0.13
SPIN3-240ENST00000640507 C6orf120Q7Z4R8 191 aa14.26□□□□□ -0.13
SPIN3-240ENST00000640507 MTERF4Q7Z6M4 381 aaKnown RBP14.26□□□□□ -0.13
SPIN3-240ENST00000640507 GATSQ8NAP1 163 aa14.26□□□□□ -0.13
SPIN3-240ENST00000640507 OR5AK3PQ8NH89 298 aa14.26□□□□□ -0.13
SPIN3-240ENST00000640507 RAB3IL1Q8TBN0 382 aa14.26□□□□□ -0.13
SPIN3-240ENST00000640507 MGARPQ8TDB4 240 aa14.26□□□□□ -0.13
SPIN3-240ENST00000640507 OR7D2Q96RA2 312 aa14.26□□□□□ -0.13
SPIN3-240ENST00000640507 NKIRAS1Q9NYS0 192 aa14.26□□□□□ -0.13
SPIN3-240ENST00000640507 STOML1Q9UBI4 398 aa14.26□□□□□ -0.13
SPIN3-240ENST00000640507 VDAC3Q9Y277 283 aa14.26□□□□□ -0.13
SPIN3-240ENST00000640507 INTS1Q8N201 2190 aaKnown RBP14.26□□□□□ -0.13
SPIN3-240ENST00000640507 CSMD1Q96PZ7 3565 aa14.26□□□□□ -0.13
SPIN3-240ENST00000640507 ABCA12Q86UK0 2595 aa14.26□□□□□ -0.13
SPIN3-240ENST00000640507 SDHDO14521 159 aa14.25□□□□□ -0.13
SPIN3-240ENST00000640507 HDAC3O15379 428 aa14.25□□□□□ -0.13
SPIN3-240ENST00000640507 CRHP06850 196 aa14.25□□□□□ -0.13
SPIN3-240ENST00000640507 ZNF17P17021 662 aa14.25□□□□□ -0.13
SPIN3-240ENST00000640507 MATN1P21941 496 aa14.25□□□□□ -0.13
SPIN3-240ENST00000640507 SOAT1P35610 550 aa14.25□□□□□ -0.13
SPIN3-240ENST00000640507 CLNS1AP54105 237 aaKnown RBP14.25□□□□□ -0.13
SPIN3-240ENST00000640507 ATP12AP54707 1039 aa14.25□□□□□ -0.13
SPIN3-240ENST00000640507 CLDN20P56880 219 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms