RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 MAN1A2O60476 641 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 ICOSLGO75144 302 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 UGT2B11O75310 529 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 PPM1BO75688 479 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 DNAJB5O75953 348 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 OR2J2O76002 312 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 OXSR1O95747 527 aaPredicted RBP9.34□□□□□ -0.91
SMG1-208ENST00000563448 ICAM2P13598 275 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 ITGA2P17301 1181 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 TBXA2RP21731 343 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 FUT4P22083 530 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 LCN1P31025 176 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 KRT20P35900 424 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 GTF2A1P52655 376 aaPredicted RBP9.34□□□□□ -0.91
SMG1-208ENST00000563448 IST1P53990 364 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 CHAF1BQ13112 559 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 TBC1D25Q3MII6 688 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 KLHL26Q53HC5 615 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 EIPR1Q53HC9 387 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 APOOLQ6UXV4 268 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 DEF8Q6ZN54 512 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 ZNF605Q86T29 641 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 TSPYL5Q86VY4 417 aaPredicted RBP9.34□□□□□ -0.91
SMG1-208ENST00000563448 EPHX4Q8IUS5 362 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 SCNM1Q9BWG6 230 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 HOXD1Q9GZZ0 328 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 ZBTB20Q9HC78 741 aaPredicted RBP9.34□□□□□ -0.91
SMG1-208ENST00000563448 UBQLN4Q9NRR5 601 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.34□□□□□ -0.91
SMG1-208ENST00000563448 KLHL28Q9NXS3 571 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 SLC13A4Q9UKG4 626 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 SLC9A8Q9Y2E8 581 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 SERINC4A6NH21 518 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 DPM1O60762 260 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 NAGAP17050 411 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 RHCEP18577 417 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 RRM2P31350 389 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 VHLP40337 213 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 ZNF136P52737 540 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 HOXC5Q00444 222 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 CLN3Q13286 438 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 GANABQ14697 944 aaKnown RBP9.34□□□□□ -0.91
SMG1-208ENST00000563448 FNDC7Q5VTL7 733 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 FCRLBQ6BAA4 426 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 SLC15A4Q8N697 577 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 SLC22A8Q8TCC7 542 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 PHF10Q8WUB8 498 aaKnown RBP9.34□□□□□ -0.91
SMG1-208ENST00000563448 CNOT9Q92600 299 aaKnown RBP9.34□□□□□ -0.91
SMG1-208ENST00000563448 HGDQ93099 445 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 RASL10BQ96S79 203 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 ZNF347Q96SE7 839 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 CIB1Q99828 191 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 PRR14Q9BWN1 585 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 RTN4RQ9BZR6 473 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 CDCP1Q9H5V8 836 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 WDR70Q9NW82 654 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 OAZ3Q9UMX2 235 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 A4GNTQ9UNA3 340 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 TESMINQ9Y4I5 508 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 CFAP54Q96N23 3096 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 FADS1O60427 444 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 ITGA10O75578 1167 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 SERPINA7P05543 415 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 GKN3PP0CG01 181 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 ZNF23P17027 643 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 WT1P19544 449 aaPredicted RBP9.33□□□□□ -0.92
SMG1-208ENST00000563448 HOXD11P31277 338 aaPredicted RBP9.33□□□□□ -0.92
SMG1-208ENST00000563448 ADH7P40394 386 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 RGS8P57771 180 aaPredicted RBP9.33□□□□□ -0.92
SMG1-208ENST00000563448 FBXW4P57775 412 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 MLF1P58340 268 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 CD226Q15762 336 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 ATP1A1-AS1Q5TC04 95 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 H3F3CQ6NXT2 135 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 TBPL2Q6SJ96 375 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 RPS19BP1Q86WX3 136 aaKnown RBP9.33□□□□□ -0.92
SMG1-208ENST00000563448 GRAMD2AQ8IUY3 354 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 KBTBD2Q8IY47 623 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 ARMC10Q8N2F6 343 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 ZNF527Q8NB42 609 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 OIT3Q8WWZ8 545 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 EME1Q96AY2 570 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 NAF1Q96HR8 494 aaKnown RBP9.33□□□□□ -0.92
SMG1-208ENST00000563448 IP6K3Q96PC2 410 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 NODALQ96S42 347 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 PIP5K1AQ99755 562 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 SLC29A1Q99808 456 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 KLHL4Q9C0H6 718 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 COQ10BQ9H8M1 238 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 DNAJB12Q9NXW2 375 aaKnown RBP9.33□□□□□ -0.92
SMG1-208ENST00000563448 RHCGQ9UBD6 479 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 ACAD8Q9UKU7 415 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 NTNG1Q9Y2I2 539 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 FAM32AQ9Y421 112 aaKnown RBP9.33□□□□□ -0.92
SMG1-208ENST00000563448 MAGED1Q9Y5V3 778 aaPredicted RBP9.33□□□□□ -0.92
SMG1-208ENST00000563448 U3KQV3 271 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 NCKAP5O14513 1909 aa9.33□□□□□ -0.92
SMG1-208ENST00000563448 PDLIM1O00151 329 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 SCDO00767 359 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 SOCS2O14508 198 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms